Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc09_g02320 Coffea canephora HOM05D005673 ORTHO05D007081 1.2e-141 506.5 263 100.0
QL08p057314 Quercus lobata HOM05D005673 ORTHO05D007081 2.2e-82 309.7 259 60.2
CSS0045417 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 2.8e-82 309.3 256 61.7
CSS0019421 Camellia sinensis var. sinensis HOM05D005673 ORTHO05D007081 1.4e-81 307.0 256 61.3
CAN.G551.89 Capsicum annuum HOM05D005673 ORTHO05D007081 7.0e-81 304.7 261 59.4
SalBow4G0159 Salvia bowleyana HOM05D005673 ORTHO05D007081 7.7e-80 301.2 264 57.2
Nitab4.5_0000575g0020 Nicotiana tabacum HOM05D005673 ORTHO05D007081 3.8e-79 298.9 263 57.8
Solyc12g009500.2 Solanum lycopersicum HOM05D005673 ORTHO05D007081 3.8e-79 298.9 261 57.5
Nitab4.5_0002078g0030 Nicotiana tabacum HOM05D005673 ORTHO05D007081 5.0e-79 298.5 263 58.2
Actinidia38234 Actinidia chinensis HOM05D005673 ORTHO05D007081 1.5e-78 297.0 257 59.1
Aqoxy4G03141 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.9e-78 296.6 262 57.6
Sopen12g004500 Solanum pennellii HOM05D005673 ORTHO05D007081 3.2e-78 295.8 261 57.1
GSVIVG01032643001 Vitis vinifera HOM05D005673 ORTHO05D007081 9.4e-78 294.3 263 55.9
Duzib114G0197 Durio zibethinus HOM05D005673 ORTHO05D007081 2.7e-77 292.7 258 59.3
PGSC0003DMG400002916 Solanum tuberosum HOM05D005673 ORTHO05D007081 2.7e-77 292.7 261 57.1
Lsat_1_v5_gn_8_21281 Lactuca sativa HOM05D005673 ORTHO05D007081 8.0e-77 291.2 263 58.2
Thecc.10G064600 Theobroma cacao HOM05D005673 ORTHO05D007081 8.0e-77 291.2 258 58.1
FAN10G0505 Fragaria x ananassa HOM05D005673 ORTHO05D007081 1.4e-76 290.4 257 57.6
FvH4_7g20560 Fragaria vesca HOM05D005673 ORTHO05D007081 4.0e-76 288.9 257 57.2
FAN03G2886 Fragaria x ananassa HOM05D005673 ORTHO05D007081 4.0e-76 288.9 257 57.2
FAN06G0951 Fragaria x ananassa HOM05D005673 ORTHO05D007081 4.0e-76 288.9 257 57.2
FAN06G2416 Fragaria x ananassa HOM05D005673 ORTHO05D007081 6.8e-76 288.1 257 57.2
COL.COLO4_08204 Corchorus olitorius HOM05D005673 ORTHO05D007081 8.8e-76 287.7 257 58.0
Haze_16957 Corylus avellana HOM05D005673 ORTHO05D007081 8.8e-76 287.7 259 56.8
ECA233G0150 Erigeron canadensis HOM05D005673 ORTHO05D007081 2.0e-75 286.6 251 59.8
FAN01G1496 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.6e-75 286.2 257 56.8
FAN01G2008 Fragaria x ananassa HOM05D005673 ORTHO05D007081 2.6e-75 286.2 257 56.8
MBI14_g17793_MAGBIO Magnolia biondii HOM05D005673 ORTHO05D007081 3.4e-75 285.8 265 55.8
Cfa001572 Carpinus fangiana HOM05D005673 ORTHO05D007081 5.7e-75 285.0 259 56.8
SGA_v2.0_scaffold62G21443 Striga asiatica HOM05D005673 ORTHO05D007081 5.7e-75 285.0 263 54.8
Ciclev10032487m.g Citrus clementina HOM05D005673 ORTHO05D007081 7.5e-75 284.6 263 56.3
RcHm_v2.0_Chr1g0364441 Rosa chinensis HOM05D005673 ORTHO05D007081 9.8e-75 284.3 257 56.4
Manes.07G105200 Manihot esculenta HOM05D005673 ORTHO05D007081 1.3e-74 283.9 263 57.4
Potri.008G046400 Populus trichocarpa HOM05D005673 ORTHO05D007081 1.3e-74 283.9 263 55.5
MSTRG.9191 Avicennia marina HOM05D005673 ORTHO05D007081 1.7e-74 283.5 267 54.3
CiPaw.02G177700 Carya illinoinensis HOM05D005673 ORTHO05D007081 3.7e-74 282.3 259 56.4
Gohir.D06G174000 Gossypium hirsutum HOM05D005673 ORTHO05D007081 8.3e-74 281.2 256 57.0
Gorai.010G203600 Gossypium raimondii HOM05D005673 ORTHO05D007081 8.3e-74 281.2 256 57.0
Lj1A928T62 Lonicera japonica HOM05D005673 ORTHO05D007081 1.1e-73 280.8 262 56.5
Lj1A926T37 Lonicera japonica HOM05D005673 ORTHO05D007081 3.1e-73 279.3 262 56.1
Rhsim03G0121300 Rhododendron simsii HOM05D005673 ORTHO05D007081 3.1e-73 279.3 227 61.2
Sabra08G0032600 Salix brachista HOM05D005673 ORTHO05D007081 5.4e-73 278.5 263 55.5
MD01G1114500 Malus domestica HOM05D005673 ORTHO05D007081 7.0e-73 278.1 255 55.3
Actinidia03012 Actinidia chinensis HOM05D005673 ORTHO05D007081 9.1e-73 277.7 257 56.4
PSO384G5123 Papaver somniferum HOM05D005673 ORTHO05D007081 1.6e-72 276.9 259 54.8
MD07G1182600 Malus domestica HOM05D005673 ORTHO05D007081 3.5e-72 275.8 255 54.9
PSO339G1442 Papaver somniferum HOM05D005673 ORTHO05D007081 5.9e-72 275.0 259 53.7
Gohir.A06G179004 Gossypium hirsutum HOM05D005673 ORTHO05D007081 7.7e-72 274.6 256 56.2
CANSAT11G2273 Cannabis sativa HOM05D005673 ORTHO05D007081 1.7e-71 273.5 264 53.8
HanXRQChr08g0219361 Helianthus annuus HOM05D005673 ORTHO05D007081 2.3e-71 273.1 261 55.2
Cfa005598 Carpinus fangiana HOM05D005673 ORTHO05D007081 1.5e-70 270.4 259 54.4
AUR62036006 Chenopodium quinoa HOM05D005673 ORTHO05D007081 2.5e-70 269.6 265 54.3
Hund22450 Selenicereus undatus HOM05D005673 ORTHO05D007081 9.5e-70 267.7 265 53.6
THA.LOC104825722 Tarenaya hassleriana HOM05D005673 ORTHO05D007081 9.5e-70 267.7 263 55.1
Lalb_Chr19g0126251 Lupinus albus HOM05D005673 ORTHO05D007081 8.0e-69 264.6 254 52.0
CARHR261110 Cardamine hirsuta HOM05D005673 ORTHO05D007081 1.4e-68 263.8 261 52.5
EL10Ac2g03532 Beta vulgaris HOM05D005673 ORTHO05D007081 2.3e-68 263.1 263 54.0
PGR142G2170 Punica granatum HOM05D005673 ORTHO05D007081 5.2e-68 261.9 257 53.3
TWI38G1168 Tripterygium wilfordii HOM05D005673 ORTHO05D007081 8.9e-68 261.2 263 52.5
AT4G10090 Arabidopsis thaliana HOM05D005673 ORTHO05D007081 1.2e-67 260.8 262 52.7
MELO3C011718.2 Cucumis melo HOM05D005673 ORTHO05D007081 2.6e-67 259.6 261 53.3
AL6G43874 Arabidopsis lyrata HOM05D005673 ORTHO05D007081 5.7e-67 258.5 262 52.7
arahy.Tifrunner.gnm1.ann1.R12QR1 Arachis hypogaea HOM05D005673 ORTHO05D007081 7.5e-67 258.1 258 50.0
Lj1g0007847 Lotus japonicus HOM05D005673 ORTHO05D007081 2.2e-66 256.5 260 50.4
CsaV3_5G006400 Cucumis sativus L. HOM05D005673 ORTHO05D007081 2.8e-66 256.1 259 52.9
arahy.Tifrunner.gnm1.ann1.YNZN7C Arachis hypogaea HOM05D005673 ORTHO05D007081 3.7e-66 255.8 258 50.4
Carub.0006s2866 Capsella rubella HOM05D005673 ORTHO05D007081 3.7e-66 255.8 263 52.1
Ah.16g108000 Amaranthus hybridus HOM05D005673 ORTHO05D007081 4.9e-66 255.4 270 50.4
Thhalv10028887m.g Eutrema salsugineum HOM05D005673 ORTHO05D007081 8.3e-66 254.6 262 52.7
Sp6g07430 Schrenkiella parvula HOM05D005673 ORTHO05D007081 1.4e-65 253.8 261 50.6
Migut.F02013 Erythranthe guttata HOM05D005673 ORTHO05D007081 1.8e-65 253.4 272 55.5
BcaB01g01447 Brassica carinata HOM05D005673 ORTHO05D007081 3.1e-65 252.7 264 51.1
DCAR_015256 Daucus carota HOM05D005673 ORTHO05D007081 4.1e-65 252.3 314 44.6
Sed0006326 Sechium edule HOM05D005673 ORTHO05D007081 4.1e-65 252.3 259 51.7
Eucgr.G02786 Eucalyptus grandis HOM05D005673 ORTHO05D007081 5.4e-65 251.9 259 49.0
ClCG02G013770 Citrullus lanatus HOM05D005673 ORTHO05D007081 2.7e-64 249.6 260 51.2
A09p28870 Brassica napus HOM05D005673 ORTHO05D007081 3.5e-64 249.2 255 50.6
BcaC04g21010 Brassica carinata HOM05D005673 ORTHO05D007081 7.8e-64 248.1 258 50.0
C09p36690 Brassica napus HOM05D005673 ORTHO05D007081 7.8e-64 248.1 258 50.0
BolC9t56500H Brassica oleracea HOM05D005673 ORTHO05D007081 7.8e-64 248.1 258 50.0
TPR.G10191 Trifolium pratense HOM05D005673 ORTHO05D007081 1.7e-63 246.9 253 49.0
Oeu008278.1 Olea europaea HOM05D005673 ORTHO05D007081 2.3e-63 246.5 221 59.3
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 5.0e-63 245.4 257 46.3
Ca_07421_v3 Cicer arietinum L. HOM05D005673 ORTHO05D007081 8.6e-63 244.6 253 48.2
Aa31LG9G11910 Aethionema arabicum HOM05D005673 ORTHO05D007081 1.1e-62 244.2 259 50.2
TAR623G0755 Trochodendron aralioides HOM05D005673 ORTHO05D007081 2.1e-61 240.0 220 58.2
Glyma.08G340700 Glycine max HOM05D005673 ORTHO05D007081 8.0e-61 238.0 257 48.2
Prupe.2G221200 Prunus persica HOM05D005673 ORTHO05D007081 1.0e-60 237.7 214 56.5
vmacro07099 Vaccinium macrocarpon HOM05D005673 ORTHO05D007081 1.2e-59 234.2 232 55.2
Atru.BG.271.p Acer truncatum HOM05D005673 ORTHO05D007081 4.9e-58 228.8 230 51.7
HPP92_012063 Vanilla planifolia HOM05D005673 ORTHO05D007081 1.1e-57 227.6 267 46.4
Phvul.008G138600 Phaseolus vulgaris HOM05D005673 ORTHO05D007081 1.6e-56 223.8 259 46.3
Nn2g10602 Nelumbo nucifera HOM05D005673 ORTHO05D007081 6.0e-56 221.9 229 52.4
Sc20g0002250 Simmondsia chinensis HOM05D005673 ORTHO05D007081 1.0e-55 221.1 227 49.8
Zm00001eb378810 Zea mays HOM05D005673 ORTHO05D007081 5.0e-55 218.8 260 43.8
Os03g0284000 Oryza sativa ssp. japonica HOM05D005673 ORTHO05D007081 3.3e-54 216.1 262 42.7
Peaxi162Scf00170g00413 Petunia axillaris HOM05D005673 ORTHO05D007081 3.6e-53 212.6 232 49.1
AUR62041616 Chenopodium quinoa HOM05D005673 ORTHO05D007081 9.8e-51 204.5 263 44.5
Dinv25934 Davidia involucrata HOM05D005673 ORTHO05D007081 1.3e-50 204.1 164 63.4
Atru.chr12.608 Acer truncatum HOM05D005673 ORTHO05D007081 1.0e-47 194.5 164 57.9
SGA_v2.0_scaffold17G08196 Striga asiatica HOM05D005673 ORTHO05D007081 2.8e-45 186.4 150 60.0
Hma1.2p1_0348F.1_g131860 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 9.9e-43 177.9 151 58.3
MD00G1166800 Malus domestica HOM05D005673 ORTHO05D007081 4.6e-40 169.1 185 48.6
Medtr7g047440 Medicago truncatula HOM05D005673 ORTHO05D007081 3.4e-35 152.9 145 51.7
Medtr7g451610 Medicago truncatula HOM05D005673 ORTHO05D007081 3.4e-35 152.9 145 51.7
Medtr7g451710 Medicago truncatula HOM05D005673 ORTHO05D007081 3.4e-35 152.9 145 51.7
Mapoly0003s0199 Marchantia polymorpha HOM05D005673 ORTHO05D007081 2.2e-34 150.2 246 37.8
HPP92_012075 Vanilla planifolia HOM05D005673 ORTHO05D007081 3.8e-34 149.4 163 47.9
unitig_37.g12298 Utricularia gibba HOM05D005673 ORTHO05D007081 4.9e-34 149.1 124 58.9
VMungo1383G1385 Vigna mungo HOM05D005673 ORTHO05D007081 2.7e-32 143.3 149 48.3
AagrBONN_evm.TU.Sc2ySwM_362.1467 Anthoceros agrestis HOM05D005673 ORTHO05D007081 3.1e-28 129.8 249 31.3
Pp3c2_31740 Physcomitrium patens HOM05D005673 ORTHO05D007081 5.2e-28 129.0 256 31.6
Psat0s9937g0040 Pisum sativum HOM05D005673 ORTHO05D007081 6.9e-28 128.6 109 59.6
SMO347G0616 Selaginella moellendorffii HOM05D005673 ORTHO05D007081 2.6e-27 126.7 200 37.5
Psat3g152960 Pisum sativum HOM05D005673 ORTHO05D007081 2.1e-24 117.1 107 53.3
Aqoxy4G03136 Aquilegia oxysepala HOM05D005673 ORTHO05D007081 1.7e-23 114.0 164 47.6
PSO713G0026 Papaver somniferum HOM05D005673 ORTHO05D007081 3.3e-22 109.8 164 39.6
Psat3g152920 Pisum sativum HOM05D005673 ORTHO05D007081 2.2e-18 97.1 97 47.4
Psat3g153040 Pisum sativum HOM05D005673 ORTHO05D007081 9.3e-17 91.7 104 45.2
unitig_37.g12299 Utricularia gibba HOM05D005673 ORTHO05D007081 1.8e-15 87.4 84 48.8
HanXRQChr02g0043631 Helianthus annuus HOM05D005673 ORTHO05D007081 8.7e-15 85.1 92 50.0
Cpa.g.sc5360.1 Carica papaya HOM05D005673 ORTHO05D007081 3.7e-13 79.7 49 71.4
Hma1.2p1_0348F.1_g131840 Hydrangea macrophylla HOM05D005673 ORTHO05D007081 1.1e-12 78.2 78 56.4
Medtr7g050450 Medicago truncatula HOM05D005673 ORTHO05D007081 1.4e-12 77.8 79 48.1
VMungo1383G3547 Vigna mungo HOM05D005673 ORTHO05D007081 1.8e-12 77.4 76 50.0
CBR_g23354 Chara braunii HOM05D005673 ORTHO05D007081 6.9e-12 75.5 164 35.4
Cpa.g.c44350 Carica papaya HOM05D005673 ORTHO05D007081 1.3e-10 71.2 74 51.4
HanXRQChr13g0394111 Helianthus annuus HOM05D005673 ORTHO05D007081 1.4e-09 67.8 72 50.0
BcaB04g18418 Brassica carinata HOM05D005673 ORTHO05D007081 3.5e-08 63.2 96 39.6
Oeu008279.1 Olea europaea HOM05D005673 ORTHO05D007081 1.5e-06 57.8 42 61.9


User provided reference genes

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