Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g14650 Coffea canephora HOM05D004737 ORTHO05D005623 1.4e-93 346.3 172 100.0
Dinv38949 Davidia involucrata HOM05D004737 ORTHO05D005623 1.1e-71 273.5 172 78.5
Hma1.2p1_0896F.1_g233940 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.5e-71 273.1 172 77.3
Lj8A232T63 Lonicera japonica HOM05D004737 ORTHO05D005623 5.6e-71 271.2 172 77.3
Rhsim02G0228600 Rhododendron simsii HOM05D004737 ORTHO05D005623 1.2e-70 270.0 164 80.5
GSVIVG01019762001 Vitis vinifera HOM05D004737 ORTHO05D005623 1.4e-69 266.5 163 79.8
Potri.001G104800 Populus trichocarpa HOM05D004737 ORTHO05D005623 8.9e-69 263.8 172 73.8
TAR625G0056 Trochodendron aralioides HOM05D004737 ORTHO05D005623 1.2e-68 263.5 164 78.0
vmacro11322 Vaccinium macrocarpon HOM05D004737 ORTHO05D005623 1.5e-68 263.1 164 78.0
MSTRG.25602 Avicennia marina HOM05D004737 ORTHO05D005623 2.0e-68 262.7 164 76.8
SGA_v2.0_scaffold253G45138 Striga asiatica HOM05D004737 ORTHO05D005623 4.4e-68 261.5 169 75.7
TWI38G1747 Tripterygium wilfordii HOM05D004737 ORTHO05D005623 5.8e-68 261.2 169 76.3
Nitab4.5_0001215g0220 Nicotiana tabacum HOM05D004737 ORTHO05D005623 1.3e-67 260.0 171 73.7
Nitab4.5_0010794g0020 Nicotiana tabacum HOM05D004737 ORTHO05D005623 1.3e-67 260.0 171 73.7
MD14G1103600 Malus domestica HOM05D004737 ORTHO05D005623 1.7e-67 259.6 172 75.0
QL12p034148 Quercus lobata HOM05D004737 ORTHO05D005623 2.9e-67 258.8 171 74.3
QL12p033263 Quercus lobata HOM05D004737 ORTHO05D005623 3.8e-67 258.5 171 74.9
QL12p034065 Quercus lobata HOM05D004737 ORTHO05D005623 3.8e-67 258.5 171 74.9
CSS0013453 Camellia sinensis var. sinensis HOM05D004737 ORTHO05D005623 1.9e-66 256.1 164 78.0
SalBow5G1266 Salvia bowleyana HOM05D004737 ORTHO05D005623 1.9e-66 256.1 164 76.2
Prupe.5G098900 Prunus persica HOM05D004737 ORTHO05D005623 1.2e-65 253.4 167 73.7
QL12p034121 Quercus lobata HOM05D000005 ORTHO05D000833 1.2e-65 253.4 171 72.5
RcHm_v2.0_Chr7g0197851 Rosa chinensis HOM05D004737 ORTHO05D005623 1.2e-65 253.4 167 74.9
EL10Ac6g13984 Beta vulgaris HOM05D004737 ORTHO05D005623 2.7e-65 252.3 164 73.8
Duzib084G0936 Durio zibethinus HOM05D004737 ORTHO05D005623 4.6e-65 251.5 172 71.5
PGSC0003DMG400031232 Solanum tuberosum HOM05D004737 ORTHO05D005623 5.1e-64 248.1 166 72.3
Sabra01G0079500 Salix brachista HOM05D004737 ORTHO05D005623 1.5e-63 246.5 207 61.8
Lsat_1_v5_gn_3_7380 Lactuca sativa HOM05D004737 ORTHO05D005623 2.5e-63 245.7 172 70.3
Sed0019193 Sechium edule HOM05D004737 ORTHO05D005623 2.5e-63 245.7 163 74.8
Solyc10g074990.2 Solanum lycopersicum HOM05D004737 ORTHO05D005623 3.3e-63 245.4 165 72.1
CsaV3_5G002870 Cucumis sativus L. HOM05D004737 ORTHO05D005623 4.3e-63 245.0 163 72.4
AUR62010668 Chenopodium quinoa HOM05D004737 ORTHO05D005623 5.6e-63 244.6 164 73.2
Manes.02G022400 Manihot esculenta HOM05D004737 ORTHO05D005623 7.3e-63 244.2 163 72.4
Sopen10g027480 Solanum pennellii HOM05D004737 ORTHO05D005623 9.6e-63 243.8 165 71.5
Nn5g30495 Nelumbo nucifera HOM05D004737 ORTHO05D005623 1.2e-62 243.4 162 75.9
MELO3C005669.2 Cucumis melo HOM05D004737 ORTHO05D005623 1.6e-62 243.0 163 71.8
HanXRQChr06g0165541 Helianthus annuus HOM05D004737 ORTHO05D005623 1.6e-62 243.0 172 66.9
PGR042G1084 Punica granatum HOM05D004737 ORTHO05D005623 2.8e-62 242.3 172 67.4
Gohir.D08G200800 Gossypium hirsutum HOM05D004737 ORTHO05D005623 6.2e-62 241.1 163 71.8
Gorai.004G211600 Gossypium raimondii HOM05D004737 ORTHO05D005623 6.2e-62 241.1 163 71.8
AUR62017215 Chenopodium quinoa HOM05D004737 ORTHO05D005623 8.1e-62 240.7 164 71.3
DCAR_008401 Daucus carota HOM05D004737 ORTHO05D005623 3.1e-61 238.8 155 74.8
Haze_08850 Corylus avellana HOM05D004737 ORTHO05D005623 5.2e-61 238.0 155 76.1
Haze_08864 Corylus avellana HOM05D004737 ORTHO05D005623 5.2e-61 238.0 155 76.1
Gohir.A08G182200 Gossypium hirsutum HOM05D004737 ORTHO05D005623 9.0e-61 237.3 163 70.6
Eucgr.E00582 Eucalyptus grandis HOM05D004737 ORTHO05D005623 1.2e-60 236.9 172 65.7
COL.COLO4_34453 Corchorus olitorius HOM05D004737 ORTHO05D005623 3.4e-60 235.3 163 69.9
CDE04G2100 Ceratophyllum demersum HOM05D004737 ORTHO05D005623 7.6e-60 234.2 163 68.1
Thecc.03G277700 Theobroma cacao HOM05D004737 ORTHO05D005623 1.3e-59 233.4 176 67.0
Ah.02g116610 Amaranthus hybridus HOM05D000756 ORTHO05D000604 2.9e-59 232.3 157 73.9
CANSAT21G0205 Cannabis sativa HOM05D004737 ORTHO05D005623 1.9e-58 229.6 169 66.3
ClCG01G002790 Citrullus lanatus HOM05D004737 ORTHO05D005623 3.2e-58 228.8 155 72.3
ECA246G0717 Erigeron canadensis HOM05D004737 ORTHO05D005623 3.2e-58 228.8 173 64.7
Peaxi162Scf00198g00034 Petunia axillaris HOM05D004737 ORTHO05D005623 4.2e-58 228.4 181 63.0
Lj2g0011086 Lotus japonicus HOM05D004737 ORTHO05D005623 5.4e-58 228.0 173 67.1
VMungo1215G1017 Vigna mungo HOM05D004737 ORTHO05D005623 7.1e-58 227.6 164 70.1
Hma1.2p1_0896F.1_g233950 Hydrangea macrophylla HOM05D004737 ORTHO05D005623 1.6e-57 226.5 172 67.4
CAN.G1149.8 Capsicum annuum HOM05D004737 ORTHO05D005623 1.3e-56 223.4 169 64.5
Aqoxy6G02772 Aquilegia oxysepala HOM05D004737 ORTHO05D005623 6.6e-56 221.1 164 67.7
HPP92_015901 Vanilla planifolia HOM05D004737 ORTHO05D005623 6.6e-56 221.1 168 62.5
CiPaw.11G135900 Carya illinoinensis HOM05D004737 ORTHO05D005623 8.7e-56 220.7 169 65.1
FvH4_5g02300 Fragaria vesca HOM05D004737 ORTHO05D005623 1.5e-55 219.9 169 64.5
Phvul.002G157400 Phaseolus vulgaris HOM05D004737 ORTHO05D005623 1.9e-55 219.5 164 68.9
Ciclev10006013m.g Citrus clementina HOM05D004737 ORTHO05D005623 9.6e-55 217.2 155 68.4
Glyma.01G219700 Glycine max HOM05D004737 ORTHO05D005623 3.6e-54 215.3 173 65.9
SGA_v2.0_scaffold96G28950 Striga asiatica HOM05D004737 ORTHO05D005623 8.1e-54 214.2 169 64.5
Lalb_Chr09g0321031 Lupinus albus HOM05D004737 ORTHO05D005623 1.1e-53 213.8 164 68.3
Atru.chr2.2103 Acer truncatum HOM05D004737 ORTHO05D005623 4.0e-53 211.8 163 65.6
Actinidia14554 Actinidia chinensis HOM05D004737 ORTHO05D005623 9.0e-53 210.7 160 68.1
ATR0782G239 Amborella trichopoda HOM05D004737 ORTHO05D005623 9.0e-53 210.7 164 61.0
TPR.G6698 Trifolium pratense HOM05D004737 ORTHO05D005623 1.5e-52 209.9 164 62.2
arahy.Tifrunner.gnm1.ann1.1HA888 Arachis hypogaea HOM05D004737 ORTHO05D005623 9.9e-52 207.2 161 67.1
SHI07123 Sapria himalayana HOM05D004737 ORTHO05D005623 2.9e-51 205.7 164 61.0
unitig_88.g27612 Utricularia gibba HOM05D004737 ORTHO05D005623 5.4e-50 201.4 164 61.0
AT3G52905 Arabidopsis thaliana HOM05D004737 ORTHO05D005623 1.6e-49 199.9 172 58.7
BcaC02g09203 Brassica carinata HOM05D004737 ORTHO05D005623 2.1e-49 199.5 168 60.1
C04p40020 Brassica napus HOM05D004737 ORTHO05D005623 2.1e-49 199.5 168 60.1
BolC4t25575H Brassica oleracea HOM05D004737 ORTHO05D005623 2.1e-49 199.5 168 60.1
AL5G33690 Arabidopsis lyrata HOM05D004737 ORTHO05D005623 3.5e-49 198.7 172 58.1
A04p06580 Brassica napus HOM05D004737 ORTHO05D005623 6.0e-49 198.0 163 61.3
BraA04t16363Z Brassica rapa HOM05D004737 ORTHO05D005623 6.0e-49 198.0 163 61.3
BcaB02g08548 Brassica carinata HOM05D004737 ORTHO05D005623 7.9e-49 197.6 164 61.6
Sp5g09430 Schrenkiella parvula HOM05D004737 ORTHO05D005623 7.9e-49 197.6 172 59.3
Thhalv10010768m.g Eutrema salsugineum HOM05D004737 ORTHO05D005623 1.0e-48 197.2 172 58.1
BraA07t29816Z Brassica rapa HOM05D004737 ORTHO05D005623 2.3e-48 196.1 173 58.4
CARHR162770 Cardamine hirsuta HOM05D004737 ORTHO05D005623 2.3e-48 196.1 172 58.7
Carub.0005s1938 Capsella rubella HOM05D004737 ORTHO05D005623 3.0e-48 195.7 172 58.1
THA.LOC104805035 Tarenaya hassleriana HOM05D004737 ORTHO05D005623 3.9e-48 195.3 169 59.2
A07p21280 Brassica napus HOM05D004737 ORTHO05D005623 5.1e-48 194.9 173 57.8
Sc07g0009740 Simmondsia chinensis HOM05D004737 ORTHO05D005623 6.7e-48 194.5 125 78.4
Os01g0764700 Oryza sativa ssp. japonica HOM05D004737 ORTHO05D005623 1.5e-47 193.4 164 61.0
arahy.Tifrunner.gnm1.ann1.4Y2W44 Arachis hypogaea HOM05D004737 ORTHO05D005623 4.3e-47 191.8 153 66.7
BcaC08g44605 Brassica carinata HOM05D004737 ORTHO05D005623 1.3e-46 190.3 175 57.7
C06p20780 Brassica napus HOM05D004737 ORTHO05D005623 1.6e-46 189.9 175 57.7
BolC6t37261H Brassica oleracea HOM05D004737 ORTHO05D005623 1.6e-46 189.9 175 57.7
Aa31LG10G7820 Aethionema arabicum HOM05D004737 ORTHO05D005623 2.6e-44 182.6 171 55.0
Migut.A00772 Erythranthe guttata HOM05D004737 ORTHO05D005623 4.5e-44 181.8 115 75.7
Psat0s3411g0080 Pisum sativum HOM05D004737 ORTHO05D005623 3.5e-41 172.2 164 57.3
PSO675G2933 Papaver somniferum HOM05D004737 ORTHO05D005623 5.3e-37 158.3 190 47.4
ECA246G4230 Erigeron canadensis HOM05D004737 ORTHO05D005623 1.5e-36 156.8 174 46.6
PSO541G1514 Papaver somniferum HOM05D004737 ORTHO05D005623 2.6e-36 156.0 190 48.4
Atru.chr2.774 Acer truncatum HOM05D004737 ORTHO05D005623 2.1e-33 146.4 175 44.0
Atru.chr11.10 Acer truncatum HOM05D004737 ORTHO05D005623 2.7e-33 146.0 166 47.6
Atru.chr6.144 Acer truncatum HOM05D004737 ORTHO05D005623 3.3e-31 139.0 177 45.8
Atru.chr6.77 Acer truncatum HOM05D004737 ORTHO05D005623 4.8e-30 135.2 177 45.8
Atru.chr1.3075 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-29 134.0 185 40.5
Atru.chr1.3074 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-27 127.1 177 40.7
Atru.chr6.169 Acer truncatum HOM05D004737 ORTHO05D005623 6.5e-27 124.8 165 45.5
BcaB02g07803 Brassica carinata HOM05D004737 ORTHO05D005623 1.9e-26 123.2 111 54.1
AagrBONN_evm.TU.Sc2ySwM_362.2040 Anthoceros agrestis HOM05D004737 ORTHO05D005623 3.2e-26 122.5 159 40.9
SEGI_05186 Sequoiadendron giganteum HOM05D004737 ORTHO05D005623 3.2e-26 122.5 113 54.9
Glyma.11G023800 Glycine max HOM05D004737 ORTHO05D005623 7.2e-26 121.3 113 61.1
Eucgr.E00580 Eucalyptus grandis HOM05D004737 ORTHO05D005623 1.0e-24 117.5 76 71.1
Atru.chr1.4031 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-24 117.1 178 38.2
Atru.chr5.3476 Acer truncatum HOM05D004737 ORTHO05D005623 2.3e-24 116.3 175 42.9
Atru.chr13.1520 Acer truncatum HOM05D004737 ORTHO05D005623 3.0e-24 115.9 185 37.8
Zm00001eb152210 Zea mays HOM05D004737 ORTHO05D005623 5.1e-24 115.2 108 57.4
Atru.chr13.1180 Acer truncatum HOM05D004737 ORTHO05D005623 6.7e-24 114.8 171 41.5
CBR_g78868 Chara braunii HOM05D000019 ORTHO05D000048 2.8e-22 109.4 145 40.0
Pp3c24_17350 Physcomitrium patens HOM05D004737 ORTHO05D005623 6.3e-22 108.2 163 38.0
Atru.chr1.4028 Acer truncatum HOM05D004737 ORTHO05D005623 5.3e-21 105.1 165 37.0
Cpa.g.sc128.49 Carica papaya HOM05D004737 ORTHO05D005623 1.7e-19 100.1 70 68.6
Psat2g182280 Pisum sativum HOM05D004737 ORTHO05D005623 2.2e-19 99.8 75 65.3
Mapoly0022s0110 Marchantia polymorpha HOM05D004737 ORTHO05D005623 3.8e-19 99.0 158 37.3
Atru.chr4.898 Acer truncatum HOM05D004737 ORTHO05D005623 4.2e-18 95.5 175 34.9
Atru.chr11.9 Acer truncatum HOM05D004737 ORTHO05D005623 9.4e-18 94.4 170 36.5
ECA240G3910 Erigeron canadensis HOM05D004737 ORTHO05D005623 3.6e-17 92.4 169 31.4
Atru.chr2.781 Acer truncatum HOM05D004737 ORTHO05D005623 3.0e-16 89.4 165 32.1
Atru.chr8.895 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-15 87.4 174 32.8
FAN04G3051 Fragaria x ananassa HOM05D004737 ORTHO05D005623 5.7e-15 85.1 71 64.8
Atru.chr4.1971 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-14 82.4 173 31.2
ECA248G3864 Erigeron canadensis HOM05D004737 ORTHO05D005623 3.7e-14 82.4 154 32.5
Atru.chr6.95 Acer truncatum HOM05D004737 ORTHO05D005623 4.8e-14 82.0 111 43.2
Atru.chr1.4012 Acer truncatum HOM05D004737 ORTHO05D005623 6.3e-14 81.6 184 31.0
Atru.chr4.1967 Acer truncatum HOM05D004737 ORTHO05D005623 8.2e-14 81.3 115 40.0
ECA240G0629 Erigeron canadensis HOM05D004737 ORTHO05D005623 8.2e-14 81.3 109 41.3
Atru.chr7.1970 Acer truncatum HOM05D004737 ORTHO05D005623 1.8e-13 80.1 146 34.9
Atru.chr12.1179 Acer truncatum HOM05D004737 ORTHO05D005623 2.4e-13 79.7 170 31.2
Atru.chr2.779 Acer truncatum HOM05D004737 ORTHO05D005623 2.4e-13 79.7 180 31.7
Atru.chr4.1970 Acer truncatum HOM05D004737 ORTHO05D005623 2.4e-13 79.7 174 31.6
Atru.chr12.1688 Acer truncatum HOM05D004737 ORTHO05D005623 1.5e-12 77.0 132 33.3
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 2.0e-12 76.6 135 35.6
Atru.chr12.1177 Acer truncatum HOM05D004737 ORTHO05D005623 3.4e-12 75.9 167 29.3
Atru.chr5.3478 Acer truncatum HOM05D004737 ORTHO05D005623 6.5e-11 71.6 127 35.4
QL12p033469 Quercus lobata HOM05D004737 ORTHO05D005623 8.5e-11 71.2 46 71.7
Atru.chr12.1697 Acer truncatum HOM05D004737 ORTHO05D005623 1.1e-10 70.9 159 28.3
Atru.chr3.997 Acer truncatum HOM05D004737 ORTHO05D005623 4.2e-10 68.9 133 31.6
Atru.chr8.1290 Acer truncatum HOM05D004737 ORTHO05D005623 1.4e-08 63.9 142 30.3
Atru.chr5.2738 Acer truncatum HOM05D004737 ORTHO05D005623 2.0e-07 60.1 130 30.0
Atru.chr1.4019 Acer truncatum HOM05D002880 ORTHO05D005623 3.3e-07 59.3 116 36.2
Dinv01344 Davidia involucrata HOM05D065005 ORTHO05D005623 5.7e-07 58.5 34 73.5
Atru.chr6.94 Acer truncatum HOM05D004737 ORTHO05D005623 1.3e-06 57.4 64 50.0
Atru.chr7.1971 Acer truncatum HOM05D004737 ORTHO05D005623 3.7e-06 55.8 133 30.1
Ah.12g060480 Amaranthus hybridus HOM05D002606 ORTHO05D015240 4.8e-06 55.5 31 77.4
Medtr5g038850 Medicago truncatula HOM05D004737 ORTHO05D005623 6.3e-06 55.1 129 31.8


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