Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc08_g06480 Coffea canephora HOM05D004578 ORTHO05D005529 9.4e-242 839.7 410 100.0
Cc00_g13120 Coffea canephora HOM05D004578 ORTHO05D005529 4.4e-191 671.4 403 79.2
Peaxi162Scf00045g01734 Petunia axillaris HOM05D004578 ORTHO05D005529 3.4e-183 645.2 406 74.4
Dinv04517 Davidia involucrata HOM05D004578 ORTHO05D005529 1.4e-176 623.2 414 71.7
Nitab4.5_0000555g0200 Nicotiana tabacum HOM05D004578 ORTHO05D005529 1.8e-176 622.9 407 72.5
CAN.G673.19 Capsicum annuum HOM05D004578 ORTHO05D005529 1.3e-171 606.7 405 70.6
PGSC0003DMG400026320 Solanum tuberosum HOM05D004578 ORTHO05D005529 1.7e-171 606.3 407 69.8
Migut.A00428 Erythranthe guttata HOM05D004578 ORTHO05D005529 5.6e-170 601.3 408 68.9
Sopen08g002370 Solanum pennellii HOM05D004578 ORTHO05D005529 4.8e-169 598.2 407 68.6
DCAR_000687 Daucus carota HOM05D004578 ORTHO05D005529 4.0e-168 595.1 408 66.7
Solyc08g006430.4 Solanum lycopersicum HOM05D004578 ORTHO05D005529 2.0e-167 592.8 404 68.8
Nitab4.5_0004131g0050 Nicotiana tabacum HOM05D004578 ORTHO05D005529 2.6e-167 592.4 388 71.6
Sabra06G0211200 Salix brachista HOM05D004578 ORTHO05D005529 6.4e-166 587.8 407 68.1
Nn8g40733 Nelumbo nucifera HOM05D004578 ORTHO05D005529 1.1e-165 587.0 401 69.3
MSTRG.25795 Avicennia marina HOM05D004578 ORTHO05D005529 1.6e-164 583.2 407 66.1
Potri.018G008700 Populus trichocarpa HOM05D004578 ORTHO05D005529 1.0e-163 580.5 406 67.7
CSS0030954 Camellia sinensis var. sinensis HOM05D004578 ORTHO05D005529 1.8e-163 579.7 408 65.4
Lj7P748T39 Lonicera japonica HOM05D004578 ORTHO05D005529 3.9e-163 578.6 388 68.8
Sabra18G0013200 Salix brachista HOM05D004578 ORTHO05D005529 8.7e-163 577.4 407 67.1
Sabra18G0015700 Salix brachista HOM05D004578 ORTHO05D005529 8.7e-163 577.4 407 67.1
TAR625G0669 Trochodendron aralioides HOM05D004578 ORTHO05D005529 8.7e-163 577.4 408 66.7
MD15G1106400 Malus domestica HOM05D004578 ORTHO05D005529 1.5e-162 576.6 401 66.3
vmacro18918 Vaccinium macrocarpon HOM05D004578 ORTHO05D005529 2.5e-162 575.9 407 65.8
Actinidia06432 Actinidia chinensis HOM05D004578 ORTHO05D005529 3.3e-162 575.5 414 64.7
FAN27G0985 Fragaria x ananassa HOM05D004578 ORTHO05D005529 4.3e-162 575.1 402 66.9
Prupe.1G458600 Prunus persica HOM05D004578 ORTHO05D005529 4.3e-162 575.1 401 65.8
FAN20G1103 Fragaria x ananassa HOM05D004578 ORTHO05D005529 5.6e-162 574.7 402 66.7
FvH4_2g36660 Fragaria vesca HOM05D004578 ORTHO05D005529 9.6e-162 573.9 402 67.2
FAN15G2443 Fragaria x ananassa HOM05D004578 ORTHO05D005529 1.6e-161 573.2 402 66.9
Prupe.1G458900 Prunus persica HOM05D004578 ORTHO05D005529 2.1e-161 572.8 407 65.6
MD08G1126500 Malus domestica HOM05D004578 ORTHO05D005529 2.8e-161 572.4 401 66.3
PSO063G3790 Papaver somniferum HOM05D004578 ORTHO05D005529 3.7e-161 572.0 410 65.6
Ciclev10008459m.g Citrus clementina HOM05D004578 ORTHO05D005529 1.8e-160 569.7 408 65.9
SGA_v2.0_scaffold193G40672 Striga asiatica HOM05D004578 ORTHO05D005529 6.9e-160 567.8 398 65.1
PSO170G4894 Papaver somniferum HOM05D004578 ORTHO05D005529 9.0e-160 567.4 403 66.5
Duzib168G2341 Durio zibethinus HOM05D004578 ORTHO05D005529 1.2e-159 567.0 399 66.9
QL12p025440 Quercus lobata HOM05D004578 ORTHO05D005529 1.5e-159 566.6 396 67.2
SalBow4G0906 Salvia bowleyana HOM05D004578 ORTHO05D005529 5.8e-159 564.7 401 66.1
CANSAT25G1430 Cannabis sativa HOM05D004578 ORTHO05D005529 1.0e-158 563.9 402 65.2
Ciclev10008463m.g Citrus clementina HOM05D004578 ORTHO05D005529 3.8e-158 562.0 408 65.2
Potri.006G272800 Populus trichocarpa HOM05D004578 ORTHO05D005529 3.8e-158 562.0 399 65.4
Aqoxy7G02848 Aquilegia oxysepala HOM05D004578 ORTHO05D005529 2.5e-157 559.3 407 63.6
Thecc.09G008600 Theobroma cacao HOM05D004578 ORTHO05D005529 3.2e-157 558.9 399 64.7
COL.COLO4_19019 Corchorus olitorius HOM05D004578 ORTHO05D005529 2.7e-156 555.8 402 64.2
Rhsim10G0084800 Rhododendron simsii HOM05D004578 ORTHO05D005529 1.0e-155 553.9 390 65.4
Gorai.010G121600 Gossypium raimondii HOM05D004578 ORTHO05D005529 3.0e-155 552.4 398 65.1
MBI16_g05839_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 3.0e-155 552.4 408 64.5
Manes.16G134500 Manihot esculenta HOM05D004578 ORTHO05D005529 3.9e-155 552.0 405 63.7
TAR383G0560 Trochodendron aralioides HOM05D004578 ORTHO05D005529 6.7e-155 551.2 392 65.8
Cfa013287 Carpinus fangiana HOM05D004578 ORTHO05D005529 8.7e-155 550.8 397 65.7
CiPaw.07G211300 Carya illinoinensis HOM05D004578 ORTHO05D005529 8.7e-155 550.8 395 67.1
Lsat_1_v5_gn_9_4341 Lactuca sativa HOM05D004578 ORTHO05D005529 1.1e-154 550.4 418 62.9
Gohir.D06G107000 Gossypium hirsutum HOM05D004578 ORTHO05D005529 1.5e-154 550.1 398 65.1
Gohir.A06G104800 Gossypium hirsutum HOM05D004578 ORTHO05D005529 2.5e-154 549.3 398 64.6
Manes.03G004800 Manihot esculenta HOM05D004578 ORTHO05D005529 2.5e-154 549.3 400 63.5
AT2G24580 Arabidopsis thaliana HOM05D004578 ORTHO05D005529 3.3e-154 548.9 401 64.1
Eucgr.C04012 Eucalyptus grandis HOM05D004578 ORTHO05D005529 5.7e-154 548.1 408 63.5
ClCG05G026450 Citrullus lanatus HOM05D004578 ORTHO05D005529 9.6e-154 547.4 399 64.2
PGR044G1507 Punica granatum HOM05D004578 ORTHO05D005529 1.6e-153 546.6 404 63.9
Cpa.g.sc23.31 Carica papaya HOM05D004578 ORTHO05D005529 2.8e-153 545.8 405 62.7
TAR383G1032 Trochodendron aralioides HOM05D004578 ORTHO05D005529 2.8e-153 545.8 392 65.3
CsaV3_3G047160 Cucumis sativus L. HOM05D004578 ORTHO05D005529 3.7e-153 545.4 400 63.2
AL4G15160 Arabidopsis lyrata HOM05D004578 ORTHO05D005529 4.8e-153 545.0 400 63.5
BolC4t26970H Brassica oleracea HOM05D004578 ORTHO05D005529 6.2e-153 544.7 400 64.2
A04p18950 Brassica napus HOM05D004578 ORTHO05D005529 1.1e-152 543.9 400 64.2
BraA04t17495Z Brassica rapa HOM05D004578 ORTHO05D005529 1.4e-152 543.5 400 64.2
BcaC02g08438 Brassica carinata HOM05D004578 ORTHO05D005529 1.8e-152 543.1 400 64.0
C04p54190 Brassica napus HOM05D004578 ORTHO05D005529 1.8e-152 543.1 400 64.0
BcaB06g27986 Brassica carinata HOM05D004578 ORTHO05D005529 4.0e-152 542.0 401 63.8
CARHR117360 Cardamine hirsuta HOM05D004578 ORTHO05D005529 4.0e-152 542.0 401 62.8
TWI32G0020 Tripterygium wilfordii HOM05D004578 ORTHO05D005529 6.9e-152 541.2 404 63.4
Haze_21761 Corylus avellana HOM05D004578 ORTHO05D005529 1.2e-151 540.4 397 65.2
AUR62037713 Chenopodium quinoa HOM05D004578 ORTHO05D005529 7.6e-151 537.7 402 61.2
Thhalv10000150m.g Eutrema salsugineum HOM05D004578 ORTHO05D005529 7.6e-151 537.7 401 62.8
QL12p025516 Quercus lobata HOM05D004578 ORTHO05D005529 7.6e-151 537.7 395 64.3
Cfa013284 Carpinus fangiana HOM05D004578 ORTHO05D005529 1.3e-150 537.0 397 64.0
Carub.0004s0400 Capsella rubella HOM05D004578 ORTHO05D005529 1.7e-150 536.6 401 62.8
Atru.chr7.2661 Acer truncatum HOM05D004578 ORTHO05D005529 3.8e-150 535.4 405 64.7
MELO3C003620.2 Cucumis melo HOM05D004578 ORTHO05D005529 3.8e-150 535.4 399 62.4
HanXRQChr15g0466441 Helianthus annuus HOM05D004578 ORTHO05D005529 6.5e-150 534.6 418 60.5
RcHm_v2.0_Chr6g0305131 Rosa chinensis HOM05D004578 ORTHO05D005529 1.9e-149 533.1 401 64.1
THA.LOC104819936 Tarenaya hassleriana HOM05D004578 ORTHO05D005529 1.9e-149 533.1 401 62.6
Sp4g03570 Schrenkiella parvula HOM05D004578 ORTHO05D005529 2.5e-149 532.7 401 62.3
AUR62020290 Chenopodium quinoa HOM05D004578 ORTHO05D005529 4.2e-149 531.9 401 61.1
Aa31sc160G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 7.1e-149 531.2 401 61.8
CiPaw.08G020700 Carya illinoinensis HOM05D004578 ORTHO05D005529 9.3e-149 530.8 396 63.4
EL10Ac2g02417 Beta vulgaris HOM05D004578 ORTHO05D005529 1.2e-148 530.4 400 61.2
Hund13109 Selenicereus undatus HOM05D004578 ORTHO05D005529 5.1e-147 525.0 399 60.4
ECA247G3559 Erigeron canadensis HOM05D004578 ORTHO05D005529 4.3e-146 521.9 419 58.5
Aa31sc715G30 Aethionema arabicum HOM05D004578 ORTHO05D005529 1.3e-145 520.4 401 61.3
HanXRQChr10g0282951 Helianthus annuus HOM05D004578 ORTHO05D005529 3.7e-145 518.8 412 60.7
MBI13_g34048_MAGBIO Magnolia biondii HOM05D004578 ORTHO05D005529 4.8e-145 518.5 404 62.6
Ah.13g067790 Amaranthus hybridus HOM05D004578 ORTHO05D005529 1.4e-144 516.9 403 59.1
CDE02G4459 Ceratophyllum demersum HOM05D004578 ORTHO05D005529 1.0e-142 510.8 391 63.2
Sed0023873 Sechium edule HOM05D004578 ORTHO05D005529 1.7e-142 510.0 399 61.2
unitig_32.g11237 Utricularia gibba HOM05D004578 ORTHO05D005529 2.2e-142 509.6 391 62.4
Eucgr.C04016 Eucalyptus grandis HOM05D004578 ORTHO05D005529 5.0e-142 508.4 391 60.9
Cfa013283 Carpinus fangiana HOM05D004578 ORTHO05D005529 6.5e-142 508.1 385 62.1
VMungo1309G1783 Vigna mungo HOM05D004578 ORTHO05D005529 1.4e-141 506.9 388 59.8
Medtr3g108990 Medicago truncatula HOM05D004578 ORTHO05D005529 5.5e-141 505.0 388 59.8
Eucgr.C04014 Eucalyptus grandis HOM05D004578 ORTHO05D005529 2.1e-140 503.1 388 60.3
BcaC02g08437 Brassica carinata HOM05D004578 ORTHO05D005529 2.7e-140 502.7 399 60.9
TPR.G12360 Trifolium pratense HOM05D004578 ORTHO05D005529 4.6e-140 501.9 395 57.7
Prupe.1G458800 Prunus persica HOM05D004578 ORTHO05D005529 7.9e-140 501.1 404 60.4
Lj1g0024454 Lotus japonicus HOM05D004578 ORTHO05D005529 1.4e-139 500.4 388 59.3
Ca_15651_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 3.9e-139 498.8 392 58.9
Ca_15659_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 3.9e-139 498.8 392 58.9
Phvul.009G102000 Phaseolus vulgaris HOM05D004578 ORTHO05D005529 3.3e-138 495.7 388 59.3
Actinidia22261 Actinidia chinensis HOM05D004578 ORTHO05D005529 1.7e-137 493.4 414 59.2
arahy.Tifrunner.gnm1.ann1.M0AD1K Arachis hypogaea HOM05D004578 ORTHO05D005529 4.8e-137 491.9 394 57.1
arahy.Tifrunner.gnm1.ann1.W2ETIH Arachis hypogaea HOM05D004578 ORTHO05D005529 1.8e-136 490.0 394 57.6
TPR.G12429 Trifolium pratense HOM05D004578 ORTHO05D005529 6.9e-136 488.0 388 58.5
Glyma.04G076300 Glycine max HOM05D004578 ORTHO05D005529 2.6e-135 486.1 391 56.5
Medtr3g109010 Medicago truncatula HOM05D004578 ORTHO05D005529 4.5e-135 485.3 393 55.7
Ca_15652_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 7.2e-133 478.0 378 58.7
Ca_15660_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 7.2e-133 478.0 378 58.7
Sc07g0007360 Simmondsia chinensis HOM05D004578 ORTHO05D005529 2.7e-132 476.1 403 54.8
Psat5g024080 Pisum sativum HOM05D004578 ORTHO05D005529 2.2e-129 466.5 388 57.0
ATR0626G173 Amborella trichopoda HOM05D004578 ORTHO05D005529 2.1e-124 449.9 411 53.3
SEGI_31206 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 8.2e-121 438.0 410 52.2
SEGI_11947 Sequoiadendron giganteum HOM05D004578 ORTHO05D005529 2.9e-118 429.5 406 52.5
Lalb_Chr11g0064181 Lupinus albus HOM05D004578 ORTHO05D005529 6.5e-118 428.3 392 52.0
Os09g0498500 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 3.6e-116 422.5 399 52.9
Zm00001eb317190 Zea mays HOM05D004578 ORTHO05D005529 6.1e-116 421.8 399 52.4
Os01g0316100 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 3.7e-113 412.5 399 51.9
Zm00001eb127180 Zea mays HOM05D004578 ORTHO05D005529 1.4e-112 410.6 399 52.6
Os12g0543600 Oryza sativa ssp. japonica HOM05D004578 ORTHO05D005529 9.4e-109 397.9 375 53.6
Pp3c9_3640 Physcomitrium patens HOM05D004578 ORTHO05D005529 8.0e-108 394.8 416 48.6
Zm00001eb340420 Zea mays HOM05D004578 ORTHO05D005529 5.2e-107 392.1 391 51.2
Mapoly0152s0014 Marchantia polymorpha HOM05D004578 ORTHO05D005529 1.1e-104 384.4 409 47.7
SMO115G0125 Selaginella moellendorffii HOM05D004578 ORTHO05D005529 1.2e-100 370.9 404 46.0
Zm00001eb140430 Zea mays HOM05D004578 ORTHO05D005529 1.0e-99 367.9 406 48.3
AagrBONN_evm.TU.Sc2ySwM_368.3376 Anthoceros agrestis HOM05D004578 ORTHO05D005529 1.7e-97 360.5 403 47.4
Oeu018556.1 Olea europaea HOM05D004578 ORTHO05D005529 2.9e-94 349.7 406 47.5
Oeu008773.1 Olea europaea HOM05D004578 ORTHO05D005529 2.5e-93 346.7 402 48.3
Gohir.D06G106866 Gossypium hirsutum HOM05D004578 ORTHO05D005529 9.8e-90 334.7 398 46.5
HPP92_017393 Vanilla planifolia HOM05D004578 ORTHO05D005529 3.6e-84 316.2 395 43.5
GSVIVG01033177001 Vitis vinifera HOM05D004578 ORTHO05D005529 4.9e-81 305.8 406 43.1
Psat5g025320 Pisum sativum HOM05D004578 ORTHO05D005529 3.0e-78 296.6 249 55.0
Gorai.010G121400 Gossypium raimondii HOM05D004578 ORTHO05D005529 1.2e-76 291.2 302 48.3
Hma1.2p1_1588F.1_g292320 Hydrangea macrophylla HOM05D004578 ORTHO05D005529 4.7e-76 289.3 406 42.9
unitig_32.g11239 Utricularia gibba HOM05D004578 ORTHO05D005529 4.0e-67 259.6 184 64.7
Cfa013285 Carpinus fangiana HOM05D004578 ORTHO05D005529 5.1e-62 242.7 229 52.4
PRCOL_00000645 Prasinoderma coloniale HOM05D004578 ORTHO05D005529 1.6e-55 221.1 423 32.4
Lalb_Chr23g0269171 Lupinus albus HOM05D004578 ORTHO05D005529 1.0e-54 218.4 157 61.1
Cc08_g06580 Coffea canephora HOM05D004578 ORTHO05D005529 1.3e-49 201.4 119 79.8
HanXRQChr10g0282961 Helianthus annuus HOM05D004578 ORTHO05D005529 1.3e-41 174.9 156 56.4
unitig_32.g11238 Utricularia gibba HOM05D004578 ORTHO05D005529 8.2e-36 155.6 106 71.7
Ca_28680_v3 Cicer arietinum L. HOM05D004578 ORTHO05D005529 2.0e-34 151.0 390 27.7
Actinidia22262 Actinidia chinensis HOM05D004578 ORTHO05D005529 4.6e-31 139.8 320 29.1
TPR.G12332 Trifolium pratense HOM05D004578 ORTHO05D005529 6.9e-27 125.9 78 74.4
Cre12.g493500 Chlamydomonas reinhardtii HOM05D004578 ORTHO05D005529 5.0e-17 93.2 412 25.5
COL.COLO4_30024 Corchorus olitorius HOM05D004578 ORTHO05D005529 5.0e-09 66.6 46 63.0
VMungo1041G0001 Vigna mungo HOM05D004578 ORTHO05D005529 1.2e-07 62.0 72 54.2
Psat2g052560 Pisum sativum HOM05D004790 ORTHO05D005678 3.6e-07 60.5 47 53.2
Psat0s2347g0040 Pisum sativum HOM05D004578 ORTHO05D005529 1.0e-06 58.9 60 45.0
Cre07.g312050 Chlamydomonas reinhardtii HOM05D004578 ORTHO05D139866 5.2e-06 56.6 181 26.5


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