Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 5.1e-276 953.7 467 100.0
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 1.6e-192 676.4 463 68.7
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 7.8e-192 674.1 463 67.4
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 1.3e-191 673.3 462 68.6
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.1e-190 670.2 462 68.2
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 4.3e-190 668.3 465 68.0
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 4.3e-190 668.3 462 67.7
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 5.6e-190 667.9 462 66.5
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 1.6e-189 666.4 462 67.3
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 2.8e-189 665.6 462 67.5
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 6.2e-189 664.5 461 66.8
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 6.2e-189 664.5 462 68.2
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.1e-188 663.7 462 67.5
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 1.1e-188 663.7 462 66.5
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.1e-188 663.7 461 67.0
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 2.3e-188 662.5 462 67.7
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 2.3e-188 662.5 461 66.8
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 6.8e-188 661.0 462 67.1
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 2.6e-187 659.1 460 67.6
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 2.6e-187 659.1 486 65.2
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 5.8e-187 657.9 462 66.5
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 4.9e-186 654.8 459 67.5
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 8.3e-186 654.1 458 65.7
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 1.1e-185 653.7 462 66.9
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.1e-185 653.7 462 66.5
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 1.4e-185 653.3 459 66.4
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.9e-185 652.9 459 66.7
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 2.4e-185 652.5 463 66.3
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 5.4e-185 651.4 462 66.2
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 5.4e-185 651.4 462 66.0
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 5.4e-185 651.4 462 66.2
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 5.4e-185 651.4 459 66.9
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 9.2e-185 650.6 462 65.6
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 1.2e-184 650.2 464 64.9
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 1.6e-184 649.8 461 64.9
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.1e-184 649.4 462 66.0
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 3.5e-184 648.7 462 67.1
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 3.5e-184 648.7 462 65.2
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 4.6e-184 648.3 462 67.1
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 1.3e-183 646.7 463 65.7
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 1.3e-183 646.7 462 64.9
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 1.7e-183 646.4 459 66.4
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 1.7e-183 646.4 463 65.4
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.7e-183 646.4 441 68.3
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 2.3e-183 646.0 462 66.5
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 3.0e-183 645.6 460 65.4
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 3.0e-183 645.6 461 65.3
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 3.9e-183 645.2 459 66.4
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 6.6e-183 644.4 462 65.2
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 1.5e-182 643.3 465 64.5
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 1.9e-182 642.9 460 66.1
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 1.9e-182 642.9 463 65.9
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 3.3e-182 642.1 462 64.9
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 2.1e-181 639.4 459 65.4
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 2.8e-181 639.0 461 65.3
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 4.7e-181 638.3 459 66.0
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 4.7e-181 638.3 466 63.3
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 8.1e-181 637.5 465 64.7
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 4.0e-180 635.2 543 58.0
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 5.2e-180 634.8 460 65.2
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 3.4e-179 632.1 459 64.5
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 7.5e-179 630.9 443 66.6
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 9.9e-179 630.6 462 64.9
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.2e-178 629.4 443 67.3
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 2.9e-178 629.0 465 64.3
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 4.9e-178 628.2 462 64.1
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 8.3e-178 627.5 536 56.0
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 1.1e-177 627.1 484 62.2
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 4.1e-177 625.2 459 63.8
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 7.1e-177 624.4 463 64.4
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 1.2e-176 623.6 462 63.2
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 2.7e-176 622.5 458 64.6
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 3.5e-176 622.1 438 66.4
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 4.6e-176 621.7 458 64.6
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 6.0e-176 621.3 458 63.5
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 6.0e-176 621.3 464 63.8
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 7.8e-176 620.9 462 63.2
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 7.8e-176 620.9 465 62.2
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 2.3e-175 619.4 457 64.1
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 5.1e-175 618.2 462 63.4
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 6.6e-175 617.8 463 63.5
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 6.6e-175 617.8 460 62.8
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 6.6e-175 617.8 484 62.6
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 6.6e-175 617.8 479 61.2
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 3.3e-174 615.5 459 63.4
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 4.3e-174 615.1 462 62.8
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 6.2e-173 611.3 462 63.9
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 8.1e-173 610.9 465 61.9
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 3.1e-172 609.0 481 61.7
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 5.2e-172 608.2 447 65.3
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 6.8e-172 607.8 447 65.5
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 1.2e-171 607.1 447 65.1
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 2.0e-171 606.3 447 65.1
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 2.6e-171 605.9 445 64.7
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 4.4e-171 605.1 567 53.3
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 1.7e-170 603.2 447 64.9
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.7e-170 603.2 447 64.9
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 4.9e-170 601.7 434 64.7
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 1.0e-167 594.0 463 60.9
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 6.6e-167 591.3 463 60.9
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 8.7e-167 590.9 459 61.4
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.9e-166 589.7 419 65.9
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.3e-166 589.0 454 63.0
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 4.3e-166 588.6 429 65.3
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 2.1e-165 586.3 463 61.3
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 2.8e-165 585.9 419 65.4
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 3.6e-165 585.5 459 61.2
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 1.3e-162 577.0 422 65.2
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 2.4e-161 572.8 385 70.9
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 1.6e-160 570.1 457 59.1
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 2.7e-160 569.3 456 60.7
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 7.8e-160 567.8 465 59.6
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 1.3e-157 560.5 465 58.3
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 1.6e-157 560.1 464 58.2
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 1.6e-152 543.5 443 58.2
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 8.7e-151 537.7 455 57.4
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 3.7e-149 532.3 466 54.1
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 6.2e-149 531.6 478 55.9
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.1e-148 529.3 348 71.0
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 5.7e-134 481.9 467 52.5
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 8.5e-130 468.0 354 63.6
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 4.6e-128 462.2 462 50.9
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 1.3e-125 454.1 310 69.7
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 5.9e-115 418.7 418 50.7
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 1.6e-107 394.0 269 70.6
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 3.7e-101 372.9 503 40.8
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 3.7e-101 372.9 254 66.5
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.4e-95 354.4 316 56.6
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 2.9e-90 336.7 260 61.9
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 7.3e-81 305.4 326 50.9
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 8.9e-79 298.5 197 71.1
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 1.2e-75 288.1 242 56.6
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 2.0e-70 270.8 214 56.5
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 1.1e-68 265.0 254 48.8
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 9.6e-57 225.3 138 77.5
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 3.8e-53 213.4 174 61.5
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 5.3e-39 166.4 142 57.0
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 3.2e-36 157.1 100 77.0
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 5.1e-34 149.8 157 52.9
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 6.2e-32 142.9 90 73.3
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 3.2e-28 130.6 111 55.0
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 3.1e-23 114.0 170 41.2
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 1.3e-21 108.6 110 46.4
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 7.2e-20 102.8 89 53.9
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 1.4e-12 78.6 51 58.8
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 1.9e-12 78.2 47 78.7
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 1.9e-12 78.2 47 78.7
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 7.2e-12 76.3 58 69.0
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 1.0e-10 72.4 57 57.9
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 6.7e-10 69.7 111 41.4
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 4.1e-07 60.5 50 64.0


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