Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g19070 Coffea canephora HOM05D005190 ORTHO05D006183 3.4e-71 271.6 136 100.0
Oeu009981.1 Olea europaea HOM05D005190 ORTHO05D006183 1.2e-57 226.5 136 80.9
CSS0027522 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 1.6e-57 226.1 138 81.9
CSS0047604 Camellia sinensis var. sinensis HOM05D005190 ORTHO05D006183 1.6e-57 226.1 138 81.9
Actinidia01056 Actinidia chinensis HOM05D005190 ORTHO05D006183 2.1e-57 225.7 137 82.5
MSTRG.12184 Avicennia marina HOM05D005190 ORTHO05D006183 8.1e-57 223.8 136 80.1
Nn3g18945 Nelumbo nucifera HOM05D005190 ORTHO05D006183 1.8e-56 222.6 136 79.4
SGA_v2.0_scaffold36G14289 Striga asiatica HOM05D005190 ORTHO05D006183 2.4e-56 222.2 136 78.7
Cfa006455 Carpinus fangiana HOM05D005190 ORTHO05D006183 3.1e-56 221.9 134 80.6
MELO3C006747.2 Cucumis melo HOM05D005190 ORTHO05D006183 4.0e-56 221.5 136 81.6
CsaV3_3G015480 Cucumis sativus L. HOM05D005190 ORTHO05D006183 5.2e-56 221.1 136 80.9
Potri.015G036700 Populus trichocarpa HOM05D005190 ORTHO05D006183 1.5e-55 219.5 136 80.9
TWI38G0007 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 2.0e-55 219.2 136 77.9
CsaV3_4G025830 Cucumis sativus L. HOM05D005190 ORTHO05D006183 3.4e-55 218.4 137 81.0
Dinv09552 Davidia involucrata HOM05D005190 ORTHO05D006183 3.4e-55 218.4 139 79.9
Dinv10386 Davidia involucrata HOM05D005190 ORTHO05D006183 3.4e-55 218.4 139 79.9
Manes.17G016100 Manihot esculenta HOM05D005190 ORTHO05D006183 5.8e-55 217.6 136 78.7
QL06p013825 Quercus lobata HOM05D005190 ORTHO05D006183 5.8e-55 217.6 135 78.5
GSVIVG01017663001 Vitis vinifera HOM05D005190 ORTHO05D006183 5.8e-55 217.6 136 77.9
CiPaw.01G130900 Carya illinoinensis HOM05D005190 ORTHO05D006183 7.6e-55 217.2 134 79.1
Haze_00795 Corylus avellana HOM05D005582 ORTHO05D007028 9.9e-55 216.9 134 80.6
DCAR_006510 Daucus carota HOM05D005190 ORTHO05D006183 9.9e-55 216.9 136 77.2
Sabra15G0031200 Salix brachista HOM05D005190 ORTHO05D006183 1.3e-54 216.5 136 78.7
PGSC0003DMG400012133 Solanum tuberosum HOM05D005190 ORTHO05D006183 1.7e-54 216.1 136 77.9
Gohir.D06G202900 Gossypium hirsutum HOM05D005190 ORTHO05D006183 2.9e-54 215.3 138 78.3
Gorai.010G236800 Gossypium raimondii HOM05D005190 ORTHO05D006183 2.9e-54 215.3 138 78.3
Ciclev10006189m.g Citrus clementina HOM05D005190 ORTHO05D006183 3.8e-54 214.9 137 79.6
Duzib235G0490 Durio zibethinus HOM05D005190 ORTHO05D006183 4.9e-54 214.5 137 78.1
Peaxi162Scf00074g00538 Petunia axillaris HOM05D005190 ORTHO05D006183 4.9e-54 214.5 137 79.6
CANSAT35G0272 Cannabis sativa HOM05D005190 ORTHO05D006183 6.4e-54 214.2 136 77.9
ClCG04G007440 Citrullus lanatus HOM05D005190 ORTHO05D006183 6.4e-54 214.2 135 79.3
Sed0026997 Sechium edule HOM05D005190 ORTHO05D006183 6.4e-54 214.2 136 79.4
Gohir.A06G195300 Gossypium hirsutum HOM05D005190 ORTHO05D006183 8.4e-54 213.8 138 77.5
Hma1.2p1_0013F.1_g007820 Hydrangea macrophylla HOM05D005190 ORTHO05D006183 1.1e-53 213.4 137 79.6
RcHm_v2.0_Chr4g0426821 Rosa chinensis HOM05D005190 ORTHO05D006183 1.1e-53 213.4 136 74.3
Thecc.06G136600 Theobroma cacao HOM05D005190 ORTHO05D006183 1.1e-53 213.4 136 75.7
GSVIVG01017602001 Vitis vinifera HOM05D005190 ORTHO05D006183 1.1e-53 213.4 136 76.5
Potri.012G045500 Populus trichocarpa HOM05D005190 ORTHO05D006183 3.2e-53 211.8 136 77.2
FAN07G0799 Fragaria x ananassa HOM05D005190 ORTHO05D006183 4.2e-53 211.5 136 74.3
SGA_v2.0_scaffold198G41066 Striga asiatica HOM05D005190 ORTHO05D006183 5.4e-53 211.1 136 75.0
TAR636G2254 Trochodendron aralioides HOM05D005190 ORTHO05D006183 5.4e-53 211.1 136 77.9
Ca_02362_v3 Cicer arietinum L. HOM05D005190 ORTHO05D006183 7.1e-53 210.7 137 75.9
Rhsim04G0247000 Rhododendron simsii HOM05D005190 ORTHO05D006183 7.1e-53 210.7 138 76.8
HPP92_019515 Vanilla planifolia HOM05D005190 ORTHO05D006183 7.1e-53 210.7 137 75.2
PGR044G0309 Punica granatum HOM05D005190 ORTHO05D006183 1.6e-52 209.5 137 78.1
FAN17G1108 Fragaria x ananassa HOM05D000385 ORTHO05D006183 2.1e-52 209.1 134 73.9
SalBow4G3050 Salvia bowleyana HOM05D005190 ORTHO05D006183 2.1e-52 209.1 136 74.3
Solyc08g082740.4 Solanum lycopersicum HOM05D005190 ORTHO05D006183 2.7e-52 208.8 136 75.7
Sopen08g030970 Solanum pennellii HOM05D005190 ORTHO05D006183 2.7e-52 208.8 136 75.7
MBI19_g06603_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 3.5e-52 208.4 136 75.0
Nitab4.5_0002793g0070 Nicotiana tabacum HOM05D005190 ORTHO05D006183 3.5e-52 208.4 136 75.7
Sabra12G0031600 Salix brachista HOM05D005190 ORTHO05D006183 3.5e-52 208.4 136 75.7
TAR629G3462 Trochodendron aralioides HOM05D005190 ORTHO05D006183 3.5e-52 208.4 138 73.9
FvH4_4g21210 Fragaria vesca HOM05D005190 ORTHO05D006183 4.6e-52 208.0 136 72.8
FAN12G1005 Fragaria x ananassa HOM05D005190 ORTHO05D006183 4.6e-52 208.0 136 72.8
Medtr7g096570 Medicago truncatula HOM05D005190 ORTHO05D006183 4.6e-52 208.0 139 75.5
Prupe.8G102200 Prunus persica HOM05D005190 ORTHO05D006183 4.6e-52 208.0 137 75.2
TPR.G12566 Trifolium pratense HOM05D005190 ORTHO05D006183 1.3e-51 206.5 139 74.8
ATR0730G183 Amborella trichopoda HOM05D005190 ORTHO05D006183 1.7e-51 206.1 137 75.9
Duzib192G0082 Durio zibethinus HOM05D005190 ORTHO05D006183 1.7e-51 206.1 137 73.7
Nitab4.5_0002367g0140 Nicotiana tabacum HOM05D005190 ORTHO05D006183 1.7e-51 206.1 136 75.0
arahy.Tifrunner.gnm1.ann1.JER3JH Arachis hypogaea HOM05D005190 ORTHO05D006183 2.3e-51 205.7 138 73.2
Glyma.16G146000 Glycine max HOM05D005190 ORTHO05D006183 5.1e-51 204.5 130 76.2
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 6.6e-51 204.1 138 73.9
TWI63G0483 Tripterygium wilfordii HOM05D005190 ORTHO05D006183 6.6e-51 204.1 138 75.4
arahy.Tifrunner.gnm1.ann1.CG6LTA Arachis hypogaea HOM05D005190 ORTHO05D006183 1.1e-50 203.4 138 73.2
Glyma.02G064900 Glycine max HOM05D005190 ORTHO05D006183 1.1e-50 203.4 138 73.2
Sc06g0001490 Simmondsia chinensis HOM05D005190 ORTHO05D006183 1.1e-50 203.4 136 74.3
Migut.N00575 Erythranthe guttata HOM05D005190 ORTHO05D006183 2.5e-50 202.2 143 71.3
MD13G1144000 Malus domestica HOM05D005190 ORTHO05D006183 2.5e-50 202.2 137 73.7
CAN.G567.34 Capsicum annuum HOM05D005190 ORTHO05D006183 3.3e-50 201.8 136 74.3
Lalb_Chr07g0181821 Lupinus albus HOM05D005190 ORTHO05D006183 3.3e-50 201.8 137 70.8
Lj4g0016109 Lotus japonicus HOM05D005190 ORTHO05D006183 4.3e-50 201.4 139 72.7
Lalb_Chr13g0298851 Lupinus albus HOM05D005190 ORTHO05D006183 4.3e-50 201.4 138 71.7
Cpa.g.sc146.40 Carica papaya HOM05D005190 ORTHO05D006183 7.3e-50 200.7 135 78.5
Phvul.004G071300 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 1.6e-49 199.5 133 73.7
arahy.Tifrunner.gnm1.ann1.R3ADAS Arachis hypogaea HOM05D005190 ORTHO05D006183 3.6e-49 198.4 131 74.0
Phvul.004G071200 Phaseolus vulgaris HOM05D005190 ORTHO05D006183 3.6e-49 198.4 130 75.4
Lsat_1_v5_gn_3_12780 Lactuca sativa HOM05D005190 ORTHO05D006183 4.8e-49 198.0 136 72.1
arahy.Tifrunner.gnm1.ann1.W6NXGM Arachis hypogaea HOM05D005190 ORTHO05D006183 6.2e-49 197.6 137 72.3
Psat0ss1196g0480 Pisum sativum HOM05D005190 ORTHO05D006183 6.2e-49 197.6 132 70.5
THA.LOC104800562 Tarenaya hassleriana HOM05D005190 ORTHO05D006183 1.1e-48 196.8 131 74.8
COL.COLO4_30940 Corchorus olitorius HOM05D005190 ORTHO05D006183 3.1e-48 195.3 147 69.4
BcaC05g27594 Brassica carinata HOM05D005190 ORTHO05D006183 6.9e-48 194.1 146 67.8
A05p21200 Brassica napus HOM05D005190 ORTHO05D006183 6.9e-48 194.1 146 67.8
C05p35790 Brassica napus HOM05D005190 ORTHO05D006183 6.9e-48 194.1 146 67.8
BraA05t21026Z Brassica rapa HOM05D005190 ORTHO05D006183 6.9e-48 194.1 146 67.8
SEGI_18361 Sequoiadendron giganteum HOM05D005190 ORTHO05D006183 9.0e-48 193.7 132 73.5
HanXRQChr06g0166421 Helianthus annuus HOM05D005190 ORTHO05D006183 2.6e-47 192.2 138 70.3
HanXRQChr17g0534691 Helianthus annuus HOM05D005190 ORTHO05D006183 2.6e-47 192.2 138 71.7
ECA246G1588 Erigeron canadensis HOM05D005190 ORTHO05D006183 3.4e-47 191.8 128 71.1
EL10Ac3g06230 Beta vulgaris HOM05D005190 ORTHO05D006183 7.6e-47 190.7 137 71.5
BcaB04g17462 Brassica carinata HOM05D005190 ORTHO05D006183 9.9e-47 190.3 115 74.8
Os06g0342100 Oryza sativa ssp. japonica HOM05D005190 ORTHO05D006183 1.3e-46 189.9 138 69.6
Aa31LG10G5580 Aethionema arabicum HOM05D005190 ORTHO05D006183 4.9e-46 188.0 114 76.3
Sp1g35120 Schrenkiella parvula HOM05D005190 ORTHO05D006183 6.4e-46 187.6 115 73.9
AUR62023660 Chenopodium quinoa HOM05D005190 ORTHO05D006183 1.1e-45 186.8 137 67.9
Thhalv10011800m.g Eutrema salsugineum HOM05D005190 ORTHO05D006183 1.9e-45 186.0 114 74.6
AT1G48160 Arabidopsis thaliana HOM05D005190 ORTHO05D006183 2.4e-45 185.7 115 73.9
Carub.0001s3725 Capsella rubella HOM05D005190 ORTHO05D006183 3.2e-45 185.3 114 74.6
AUR62002533 Chenopodium quinoa HOM05D005190 ORTHO05D006183 3.2e-45 185.3 137 67.9
AL8G32340 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 4.2e-45 184.9 115 73.0
Pp3c3_17800 Physcomitrium patens HOM05D005190 ORTHO05D006183 4.2e-45 184.9 143 66.4
CARHR037790 Cardamine hirsuta HOM05D005190 ORTHO05D006183 9.3e-45 183.7 108 76.9
Zm00001eb066670 Zea mays HOM05D005190 ORTHO05D006183 1.6e-44 183.0 129 69.0
Zm00001eb081370 Zea mays HOM05D005190 ORTHO05D006183 1.6e-44 183.0 129 69.0
AL1G54730 Arabidopsis lyrata HOM05D005190 ORTHO05D006183 3.5e-44 181.8 114 71.9
BcaC07g37169 Brassica carinata HOM05D005190 ORTHO05D006183 1.0e-43 180.3 107 75.7
C08p05420 Brassica napus HOM05D005190 ORTHO05D006183 1.0e-43 180.3 107 75.7
BolC8t47359H Brassica oleracea HOM05D005190 ORTHO05D006183 1.0e-43 180.3 107 75.7
Lsat_1_v5_gn_6_83381 Lactuca sativa HOM05D005190 ORTHO05D006183 1.0e-43 180.3 119 72.3
A08p05180 Brassica napus HOM05D005190 ORTHO05D006183 3.0e-43 178.7 107 74.8
BolC5t32295H Brassica oleracea HOM05D005190 ORTHO05D006183 3.0e-43 178.7 125 67.2
BraA08t32536Z Brassica rapa HOM05D005190 ORTHO05D006183 3.0e-43 178.7 107 74.8
TPR.G39662 Trifolium pratense HOM05D005190 ORTHO05D006183 6.7e-43 177.6 119 77.3
Mapoly0004s0269 Marchantia polymorpha HOM05D005190 ORTHO05D006183 1.3e-41 173.3 132 66.7
PSO782G1806 Papaver somniferum HOM05D005190 ORTHO05D006183 1.1e-40 170.2 120 67.5
PSO478G2609 Papaver somniferum HOM05D005190 ORTHO05D006183 9.0e-40 167.2 118 66.9
MD13G1143900 Malus domestica HOM05D005190 ORTHO05D006183 3.4e-39 165.2 113 74.3
TPR.G16114 Trifolium pratense HOM05D005190 ORTHO05D006183 1.8e-35 152.9 98 71.4
unitig_747.g21355 Utricularia gibba HOM05D001490 ORTHO05D001450 1.8e-35 152.9 137 62.8
Ah.07g203500 Amaranthus hybridus HOM05D005190 ORTHO05D006183 7.4e-34 147.5 93 72.0
BcaC08g43007 Brassica carinata HOM05D005190 ORTHO05D006183 2.1e-33 146.0 86 75.6
AagrBONN_evm.TU.Sc2ySwM_362.2360 Anthoceros agrestis HOM05D005190 ORTHO05D006183 8.2e-33 144.1 129 58.9
CBR_g39024 Chara braunii HOM05D005190 ORTHO05D006183 6.9e-32 141.0 128 60.9
arahy.Tifrunner.gnm1.ann1.AFL9DX Arachis hypogaea HOM05D005190 ORTHO05D006183 1.0e-30 137.1 118 65.3
C06p02560 Brassica napus HOM05D005190 ORTHO05D006183 3.2e-29 132.1 112 58.9
SMO352G0034 Selaginella moellendorffii HOM05D005190 ORTHO05D006183 1.5e-26 123.2 123 53.7
Dinv29526 Davidia involucrata HOM05D005190 ORTHO05D006183 4.8e-25 118.2 74 79.7
BcaC01g01495 Brassica carinata HOM05D005190 ORTHO05D006183 1.4e-24 116.7 136 52.9
MBI07_g26367_MAGBIO Magnolia biondii HOM05D005190 ORTHO05D006183 3.1e-24 115.5 126 48.4
vmacro08000 Vaccinium macrocarpon HOM05D005190 ORTHO05D006183 5.3e-24 114.8 81 75.3
Eucgr.G02037 Eucalyptus grandis HOM05D005190 ORTHO05D006183 2.6e-23 112.5 72 72.2
ClCG05G006830 Citrullus lanatus HOM05D005190 ORTHO05D006183 1.4e-21 106.7 59 83.1
Aqoxy2G01813 Aquilegia oxysepala HOM05D005190 ORTHO05D006183 1.2e-20 103.6 74 70.3
MCO01G268 Micromonas commoda HOM05D005190 ORTHO05D006183 6.1e-20 101.3 100 49.0
CDE05G0439 Ceratophyllum demersum HOM05D005190 ORTHO05D006183 1.0e-19 100.5 113 51.3
BolC6t35384H Brassica oleracea HOM05D005190 ORTHO05D006183 3.0e-19 99.0 59 71.2
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 4.3e-18 95.1 83 61.4
Haze_12814 Corylus avellana HOM05D000165 ORTHO05D001328 4.3e-18 95.1 70 62.9
Cre02.g095070 Chlamydomonas reinhardtii HOM05D005190 ORTHO05D006183 7.4e-18 94.4 115 42.6
Atru.chr4.92 Acer truncatum HOM05D005190 ORTHO05D006183 1.5e-15 86.7 56 75.0
EL10As1g23068 Beta vulgaris HOM05D005190 ORTHO05D006183 9.4e-13 77.4 80 51.2
Cfa023211 Carpinus fangiana HOM05D005190 ORTHO05D006183 2.1e-12 76.3 136 40.4
RcHm_v2.0_Chr7g0219311 Rosa chinensis HOM05D005190 ORTHO05D006183 4.7e-12 75.1 59 61.0
MELO3C033488.2 Cucumis melo HOM05D005190 ORTHO05D006183 7.9e-12 74.3 76 56.6
PRCOL_00001126 Prasinoderma coloniale HOM05D005190 ORTHO05D006183 1.8e-11 73.2 138 40.6
MD13G1001700 Malus domestica HOM05D005190 ORTHO05D006183 9.7e-10 67.4 80 45.0


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