Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 7.8e-91 337.0 162 100.0
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 5.5e-52 208.0 158 61.4
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 7.2e-52 207.6 114 77.2
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 4.6e-51 204.9 155 61.3
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 6.1e-51 204.5 155 61.9
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 1.8e-50 203.0 128 71.1
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 1.5e-49 199.9 154 59.7
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.9e-49 199.5 112 78.6
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 2.5e-49 199.1 163 64.4
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 3.3e-49 198.7 143 65.7
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 4.3e-49 198.4 162 60.5
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 9.7e-49 197.2 143 64.3
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 4.1e-47 191.8 118 72.9
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 4.1e-47 191.8 110 77.3
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 5.3e-47 191.4 118 72.0
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 6.9e-47 191.0 151 61.6
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 9.0e-47 190.7 110 79.1
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 1.5e-46 189.9 126 70.6
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 2.0e-46 189.5 162 62.3
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 2.0e-46 189.5 113 74.3
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 2.6e-46 189.1 126 69.8
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 3.4e-46 188.7 112 79.5
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 4.5e-46 188.3 110 79.1
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 7.7e-46 187.6 126 69.8
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 7.7e-46 187.6 110 76.4
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 2.2e-45 186.0 116 72.4
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 2.2e-45 186.0 131 66.4
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 2.2e-45 186.0 162 59.9
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 3.8e-45 185.3 110 76.4
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 5.0e-45 184.9 132 64.4
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 5.0e-45 184.9 110 73.6
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 1.1e-44 183.7 131 67.9
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 1.4e-44 183.3 110 73.6
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 1.4e-44 183.3 115 73.0
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 1.4e-44 183.3 110 73.6
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.9e-44 183.0 110 75.5
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 2.5e-44 182.6 110 72.7
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 3.2e-44 182.2 162 59.3
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 7.2e-44 181.0 133 65.4
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 9.4e-44 180.6 110 73.6
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 9.4e-44 180.6 110 73.6
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 9.4e-44 180.6 110 73.6
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 9.4e-44 180.6 135 63.0
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 1.2e-43 180.3 128 68.0
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 1.2e-43 180.3 110 72.7
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 1.6e-43 179.9 110 76.4
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 2.7e-43 179.1 112 73.2
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 3.6e-43 178.7 129 67.4
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 4.6e-43 178.3 110 74.5
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 4.6e-43 178.3 110 74.5
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 4.6e-43 178.3 112 73.2
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 4.6e-43 178.3 129 66.7
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 4.6e-43 178.3 129 66.7
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 4.6e-43 178.3 110 72.7
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 6.1e-43 177.9 143 62.9
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 7.9e-43 177.6 128 64.8
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 7.9e-43 177.6 110 74.5
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 7.9e-43 177.6 109 72.5
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 1.0e-42 177.2 110 71.8
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 1.4e-42 176.8 110 72.7
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 1.4e-42 176.8 109 73.4
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 1.8e-42 176.4 110 71.8
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 2.3e-42 176.0 146 60.3
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 2.3e-42 176.0 132 63.6
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 3.9e-42 175.3 113 68.1
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 3.9e-42 175.3 109 73.4
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 5.1e-42 174.9 112 71.4
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 6.7e-42 174.5 120 65.8
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 1.1e-41 173.7 109 73.4
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 1.1e-41 173.7 109 71.6
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 1.1e-41 173.7 109 72.5
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 1.1e-41 173.7 109 72.5
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 1.1e-41 173.7 112 69.6
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 1.1e-41 173.7 109 74.3
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 1.5e-41 173.3 110 71.8
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 2.0e-41 172.9 125 66.4
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 2.0e-41 172.9 125 66.4
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 2.0e-41 172.9 125 66.4
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 2.5e-41 172.6 134 61.2
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 4.3e-41 171.8 131 61.8
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 4.3e-41 171.8 125 64.8
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 1.3e-40 170.2 109 70.6
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 1.3e-40 170.2 113 68.1
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 1.3e-40 170.2 110 72.7
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 2.2e-40 169.5 121 66.1
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 2.2e-40 169.5 136 61.0
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 4.8e-40 168.3 109 70.6
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 6.3e-40 167.9 109 70.6
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 8.2e-40 167.5 151 55.0
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 8.2e-40 167.5 158 53.8
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 1.1e-39 167.2 109 69.7
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 1.5e-38 163.3 137 58.4
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 2.0e-38 162.9 104 73.1
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 7.2e-36 154.5 140 55.7
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 9.4e-36 154.1 98 70.4
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 2.7e-35 152.5 215 45.6
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 3.6e-35 152.1 133 56.4
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 7.9e-35 151.0 150 49.3
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 8.8e-34 147.5 136 52.2
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 3.3e-33 145.6 138 52.2
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 3.3e-33 145.6 97 68.0
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 3.3e-33 145.6 97 69.1
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 5.7e-33 144.8 128 53.1
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 7.0e-31 137.9 110 54.5
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 5.5e-28 128.3 105 57.1
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 4.0e-26 122.1 109 51.4
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 2.0e-25 119.8 98 56.1
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 2.2e-24 116.3 74 67.6
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 1.9e-20 103.2 51 94.1
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 9.4e-20 100.9 87 55.2
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 1.6e-19 100.1 50 94.0
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 2.3e-18 96.3 53 83.0
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 2.6e-17 92.8 53 77.4
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 3.4e-17 92.4 53 75.5
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 2.2e-16 89.7 91 53.8
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 2.8e-16 89.4 63 60.3
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 1.1e-15 87.4 100 44.0
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 4.1e-15 85.5 51 76.5
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 5.9e-14 81.6 48 75.0
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 7.2e-12 74.7 45 73.3
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 1.8e-10 70.1 49 59.2
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 2.2e-08 63.2 101 41.6
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 1.2e-06 57.4 70 38.6


User provided reference genes

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