Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g17780 Coffea canephora HOM05D005030 ORTHO05D006490 0.0e+00 2356.3 1245 100.0
Cc08_g02710 Coffea canephora HOM05D005030 ORTHO05D006490 0.0e+00 1473.0 1254 64.3
Dinv24313 Davidia involucrata HOM05D005030 ORTHO05D006490 0.0e+00 1311.2 1254 57.6
Actinidia06653 Actinidia chinensis HOM05D005030 ORTHO05D006490 0.0e+00 1242.3 1268 55.4
Oeu037792.2 Olea europaea HOM05D005030 ORTHO05D006490 0.0e+00 1238.0 1319 56.9
GSVIVG01026545001 Vitis vinifera HOM05D005030 ORTHO05D006490 0.0e+00 1218.0 1262 54.2
Dinv05712 Davidia involucrata HOM05D005030 ORTHO05D006490 0.0e+00 1213.4 1251 57.6
Ciclev10024723m.g Citrus clementina HOM05D005030 ORTHO05D006490 0.0e+00 1203.0 1250 54.4
Duzib147G1675 Durio zibethinus HOM05D005030 ORTHO05D006490 0.0e+00 1201.0 1267 53.0
Sopen11g001650 Solanum pennellii HOM05D005030 ORTHO05D006490 0.0e+00 1199.1 1268 53.5
Nitab4.5_0002909g0070 Nicotiana tabacum HOM05D005030 ORTHO05D006490 0.0e+00 1193.3 1253 54.7
Potri.007G110800 Populus trichocarpa HOM05D005030 ORTHO05D006490 0.0e+00 1191.0 1266 55.5
Atru.chr4.774 Acer truncatum HOM05D005030 ORTHO05D006490 0.0e+00 1190.3 1276 53.1
Thecc.01G124600 Theobroma cacao HOM05D005030 ORTHO05D006490 0.0e+00 1187.6 1269 52.9
Lj2A602G37 Lonicera japonica HOM05D005030 ORTHO05D006490 0.0e+00 1183.7 1311 52.3
Eucgr.H04934 Eucalyptus grandis HOM05D005030 ORTHO05D006490 0.0e+00 1178.7 1263 53.4
Migut.H01102 Erythranthe guttata HOM05D005030 ORTHO05D006490 0.0e+00 1177.9 1253 53.8
Gohir.D11G232200 Gossypium hirsutum HOM05D005030 ORTHO05D006490 0.0e+00 1172.1 1263 52.3
Gohir.A11G230400 Gossypium hirsutum HOM05D005030 ORTHO05D006490 0.0e+00 1171.8 1263 52.1
Cfa002838 Carpinus fangiana HOM05D005030 ORTHO05D006490 0.0e+00 1169.5 1271 52.9
Gorai.002G151400 Gossypium raimondii HOM05D005030 ORTHO05D006490 0.0e+00 1162.9 1264 52.2
CSS0019451 Camellia sinensis var. sinensis HOM05D005030 ORTHO05D006490 0.0e+00 1160.2 1377 50.3
Sabra07G0090700 Salix brachista HOM05D005030 ORTHO05D006490 0.0e+00 1151.7 1359 52.2
Nn5g28681 Nelumbo nucifera HOM05D005030 ORTHO05D006490 0.0e+00 1149.8 1274 52.2
TWI31G0652 Tripterygium wilfordii HOM05D005030 ORTHO05D006490 0.0e+00 1133.6 1251 51.9
DCAR_001349 Daucus carota HOM05D005030 ORTHO05D006490 0.0e+00 1127.5 1340 49.5
Prupe.3G147500 Prunus persica HOM05D005030 ORTHO05D006490 0.0e+00 1126.7 1261 50.9
Peaxi162Scf00012g02419 Petunia axillaris HOM05D005030 ORTHO05D006490 0.0e+00 1122.8 1316 49.9
QL06p030436 Quercus lobata HOM05D005030 ORTHO05D006490 0.0e+00 1112.1 1402 47.4
PGR102G2159 Punica granatum HOM05D005030 ORTHO05D006490 0.0e+00 1110.9 1257 51.0
Nitab4.5_0003048g0010 Nicotiana tabacum HOM05D005030 ORTHO05D006490 0.0e+00 1098.6 1267 51.3
Sc03g0005100 Simmondsia chinensis HOM05D005030 ORTHO05D006490 0.0e+00 1095.9 1251 49.2
Lsat_1_v5_gn_1_117161 Lactuca sativa HOM05D005030 ORTHO05D006490 0.0e+00 1090.9 1281 52.3
ClCG01G015590 Citrullus lanatus HOM05D005030 ORTHO05D006490 0.0e+00 1082.8 1264 52.2
CsaV3_6G041830 Cucumis sativus L. HOM05D005030 ORTHO05D006490 2.2e-310 1069.3 1266 50.6
Phvul.002G270100 Phaseolus vulgaris HOM05D005030 ORTHO05D006490 1.0e-307 1060.4 1261 50.0
VMungo0251G0340 Vigna mungo HOM05D005030 ORTHO05D006490 6.7e-307 1057.7 1263 47.7
RcHm_v2.0_Chr2g0120111 Rosa chinensis HOM05D005030 ORTHO05D006490 8.7e-307 1057.4 1258 48.7
arahy.Tifrunner.gnm1.ann1.CRY23I Arachis hypogaea HOM05D005030 ORTHO05D006490 4.8e-305 1051.6 1269 51.1
arahy.Tifrunner.gnm1.ann1.HR53B8 Arachis hypogaea HOM05D005030 ORTHO05D006490 1.5e-303 1046.6 1269 51.4
SGA_v2.0_scaffold137G35137 Striga asiatica HOM05D005030 ORTHO05D006490 2.6e-303 1045.8 1322 47.5
Glyma.08G147000 Glycine max HOM05D005030 ORTHO05D006490 5.8e-303 1044.6 1262 50.5
Glyma.05G189400 Glycine max HOM05D005030 ORTHO05D006490 2.2e-302 1042.7 1259 49.4
Sed0011527 Sechium edule HOM05D005030 ORTHO05D006490 1.9e-301 1039.6 1267 50.1
MBI18_g25945_MAGBIO Magnolia biondii HOM05D005030 ORTHO05D006490 5.5e-301 1038.1 1273 48.4
MELO3C008038.2 Cucumis melo HOM05D005030 ORTHO05D006490 1.3e-297 1026.9 1330 48.9
Ca_17653_v3 Cicer arietinum L. HOM05D005030 ORTHO05D006490 1.1e-296 1023.8 1264 47.6
Aqoxy5G02153 Aquilegia oxysepala HOM05D005030 ORTHO05D006490 1.8e-296 1023.1 1255 48.2
FvH4_1g23980 Fragaria vesca HOM05D005030 ORTHO05D006490 9.0e-296 1020.8 1270 47.6
Medtr8g093100 Medicago truncatula HOM05D005030 ORTHO05D006490 9.0e-296 1020.8 1262 48.7
Lalb_Chr13g0296501 Lupinus albus HOM05D005030 ORTHO05D006490 1.2e-295 1020.4 1258 49.9
Lalb_Chr12g0203281 Lupinus albus HOM05D005030 ORTHO05D006490 2.2e-294 1016.1 1267 49.3
PSO210G3052 Papaver somniferum HOM05D005030 ORTHO05D006490 3.8e-294 1015.4 1270 48.3
HanXRQChr02g0043651 Helianthus annuus HOM05D005030 ORTHO05D006490 2.1e-292 1009.6 1297 47.0
FAN26G2615 Fragaria x ananassa HOM05D005030 ORTHO05D006490 4.6e-292 1008.4 1271 47.3
FAN19G2772 Fragaria x ananassa HOM05D005030 ORTHO05D006490 6.1e-292 1008.1 1296 46.8
CiPaw.03G127500 Carya illinoinensis HOM05D005030 ORTHO05D006490 5.1e-291 1005.0 1297 49.7
FAN28G1848 Fragaria x ananassa HOM05D005030 ORTHO05D006490 8.2e-289 997.7 1296 46.5
CANSAT01G2434 Cannabis sativa HOM05D005030 ORTHO05D006490 4.1e-288 995.3 1250 49.8
FAN23G1259 Fragaria x ananassa HOM05D005030 ORTHO05D006490 1.0e-286 990.7 1295 45.9
Hund04465 Selenicereus undatus HOM05D005030 ORTHO05D006490 6.5e-286 988.0 1251 46.8
Psat7g048200 Pisum sativum HOM05D005030 ORTHO05D006490 1.4e-285 986.9 1263 45.3
COL.COLO4_13999 Corchorus olitorius HOM05D005030 ORTHO05D006490 1.6e-284 983.4 1274 48.8
TPR.G37387 Trifolium pratense HOM05D005030 ORTHO05D006490 1.4e-283 980.3 1290 45.8
THA.LOC104820424 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 4.4e-282 975.3 1278 47.0
THA.LOC104821859 Tarenaya hassleriana HOM05D005030 ORTHO05D006490 7.4e-282 974.5 1280 47.4
AUR62017924 Chenopodium quinoa HOM05D005030 ORTHO05D006490 4.8e-281 971.8 1246 46.2
PSO832G2315 Papaver somniferum HOM05D005030 ORTHO05D006490 4.1e-280 968.8 1277 47.1
BcaB06g25924 Brassica carinata HOM05D005030 ORTHO05D006490 2.0e-279 966.5 1267 46.0
AUR62003613 Chenopodium quinoa HOM05D005030 ORTHO05D006490 1.3e-278 963.8 1270 45.5
Aa31LG8G5540 Aethionema arabicum HOM05D005030 ORTHO05D006490 2.2e-278 963.0 1257 45.9
A05p30890 Brassica napus HOM05D005030 ORTHO05D006490 3.8e-278 962.2 1271 45.6
Thhalv10019906m.g Eutrema salsugineum HOM05D005030 ORTHO05D006490 6.5e-278 961.4 1263 46.0
Lj4g0022240 Lotus japonicus HOM05D005030 ORTHO05D006490 6.5e-278 961.4 1259 47.4
BraA05t21931Z Brassica rapa HOM05D005030 ORTHO05D006490 1.2e-276 957.2 1271 45.6
AT3G18730 Arabidopsis thaliana HOM05D005030 ORTHO05D006490 4.7e-276 955.3 1263 45.8
Ah.03g146670 Amaranthus hybridus HOM05D005030 ORTHO05D006490 7.9e-276 954.5 1240 45.6
Sp3g16780 Schrenkiella parvula HOM05D005030 ORTHO05D006490 6.3e-273 944.9 1269 45.4
BcaC05g28579 Brassica carinata HOM05D005030 ORTHO05D006490 8.2e-273 944.5 1276 45.2
C05p46820 Brassica napus HOM05D005030 ORTHO05D006490 8.2e-273 944.5 1276 45.2
BolC5t33412H Brassica oleracea HOM05D005030 ORTHO05D006490 8.2e-273 944.5 1276 45.2
AL3G32080 Arabidopsis lyrata HOM05D005030 ORTHO05D006490 1.2e-271 940.6 1270 45.0
CARHR094120 Cardamine hirsuta HOM05D005030 ORTHO05D006490 5.0e-270 935.3 1259 44.8
Os02g0782800 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 8.5e-270 934.5 1273 44.6
Carub.0003s1851 Capsella rubella HOM05D005030 ORTHO05D006490 3.6e-268 929.1 1253 47.3
ATR0772G104 Amborella trichopoda HOM05D005030 ORTHO05D006490 9.7e-266 921.0 1284 47.3
Rhsim10G0138800 Rhododendron simsii HOM05D005030 ORTHO05D006490 2.2e-262 909.8 1268 47.7
ECA240G4559 Erigeron canadensis HOM05D005030 ORTHO05D006490 1.0e-259 901.0 1243 45.0
unitig_0.g2514 Utricularia gibba HOM05D005030 ORTHO05D006490 7.0e-248 861.7 1250 43.4
Manes.12G152000 Manihot esculenta HOM05D005030 ORTHO05D006490 4.5e-247 859.0 966 50.9
CDE06G1651 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 8.0e-236 821.6 1253 41.9
Haze_25135 Corylus avellana HOM05D005030 ORTHO05D006490 2.4e-232 810.1 932 50.1
Zm00001eb192940 Zea mays HOM05D005030 ORTHO05D006490 9.2e-224 781.6 1030 45.5
MD00G1172700 Malus domestica HOM05D005030 ORTHO05D006490 6.4e-217 758.8 1284 38.8
TAR381G0402 Trochodendron aralioides HOM05D005030 ORTHO05D006490 2.3e-198 697.2 742 53.6
HPP92_005719 Vanilla planifolia HOM05D005030 ORTHO05D006490 4.0e-195 686.4 1215 39.7
CiPaw.03G127200 Carya illinoinensis HOM05D005030 ORTHO05D006490 1.2e-194 684.9 845 47.6
MSTRG.2677 Avicennia marina HOM05D005030 ORTHO05D006490 2.3e-190 670.6 609 59.4
Cpa.g.sc42.108 Carica papaya HOM05D005030 ORTHO05D006490 1.9e-184 651.0 684 52.6
MD09G1255500 Malus domestica HOM05D005030 ORTHO05D006490 6.7e-182 642.5 933 44.1
Solyc11g005690.3 Solanum lycopersicum HOM05D005030 ORTHO05D006490 1.3e-177 628.2 735 49.8
Hma1.2p1_0006F.1_g004750 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 3.8e-177 626.7 821 47.7
MSTRG.2678 Avicennia marina HOM05D005030 ORTHO05D006490 5.0e-153 546.6 608 53.0
CAN.G802.6 Capsicum annuum HOM05D005030 ORTHO05D006490 8.5e-153 545.8 508 57.9
Cpa.g.sc42.107 Carica papaya HOM05D005030 ORTHO05D006490 9.8e-141 505.8 528 60.8
SHI11439 Sapria himalayana HOM05D005030 ORTHO05D006490 1.0e-134 485.7 653 45.2
CiPaw.03G127600 Carya illinoinensis HOM05D005030 ORTHO05D006490 5.6e-120 436.8 370 68.9
CiPaw.03G127100 Carya illinoinensis HOM05D005030 ORTHO05D006490 1.2e-119 435.6 368 68.2
Pp3c6_6440 Physcomitrium patens HOM05D005030 ORTHO05D006490 2.1e-119 434.9 1342 28.1
Mapoly0047s0105 Marchantia polymorpha HOM05D005030 ORTHO05D006490 4.0e-118 430.6 1167 29.0
EL10Ac6g15267 Beta vulgaris HOM05D005030 ORTHO05D006490 6.2e-103 380.2 496 46.0
SEGI_08752 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 3.9e-97 360.9 679 34.5
AagrBONN_evm.TU.Sc2ySwM_228.5700 Anthoceros agrestis HOM05D005030 ORTHO05D006490 6.2e-87 327.0 1025 29.0
SMO203G0163 Selaginella moellendorffii HOM05D005030 ORTHO05D006490 5.3e-86 323.9 1235 24.9
SEGI_29284 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 4.2e-83 314.3 547 36.6
Os02g0784100 Oryza sativa ssp. japonica HOM05D005030 ORTHO05D006490 5.1e-81 307.4 242 62.8
vmacro12845 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 1.1e-72 279.6 316 50.0
Haze_25140 Corylus avellana HOM05D005030 ORTHO05D006490 5.1e-65 254.2 239 59.0
MD17G1248700 Malus domestica HOM05D005030 ORTHO05D000105 8.2e-63 246.9 237 58.2
Thecc.01G125300 Theobroma cacao HOM05D005030 ORTHO05D006490 1.3e-60 239.6 374 43.0
CDE08G0761 Ceratophyllum demersum HOM05D005030 ORTHO05D006490 3.6e-58 231.5 238 54.2
FAN23G1614 Fragaria x ananassa HOM05D005030 ORTHO05D006490 3.6e-58 231.5 354 42.4
vmacro12844 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 3.3e-56 224.9 342 40.6
TAR381G0325 Trochodendron aralioides HOM05D005030 ORTHO05D006490 2.8e-55 221.9 231 56.3
SEGI_07118 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 4.5e-53 214.5 294 39.8
SEGI_25247 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 4.5e-53 214.5 294 39.8
PGSC0003DMG400025561 Solanum tuberosum HOM05D005030 ORTHO05D006490 1.4e-51 209.5 271 45.4
vmacro12843 Vaccinium macrocarpon HOM05D005030 ORTHO05D006490 7.4e-40 170.6 212 48.6
ECA234G2315 Erigeron canadensis HOM05D005030 ORTHO05D006490 1.6e-34 152.9 328 30.2
MD17G1248600 Malus domestica HOM05D005030 ORTHO05D006490 1.6e-34 152.9 301 35.9
TAR625G0665 Trochodendron aralioides HOM05D005030 ORTHO05D006490 4.0e-25 121.7 121 57.0
BcaNung06136 Brassica carinata HOM05D005030 ORTHO05D006490 1.5e-24 119.8 215 39.5
SEGI_13201 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 5.9e-21 107.8 429 27.5
Hma1.2p1_0006F.1_g004730 Hydrangea macrophylla HOM05D005030 ORTHO05D006490 2.3e-20 105.9 161 38.5
CBR_g36665 Chara braunii HOM05D005030 ORTHO05D006490 7.2e-19 100.9 491 23.6
CBR_g61481 Chara braunii HOM05D005030 ORTHO05D001575 5.2e-17 94.7 319 25.7
SEGI_13008 Sequoiadendron giganteum HOM05D005030 ORTHO05D050943 9.8e-16 90.5 431 25.3
MBI11_g38367_MAGBIO Magnolia biondii HOM05D001642 ORTHO05D010488 5.9e-13 81.3 70 61.4
SEGI_37730 Sequoiadendron giganteum HOM05D005030 ORTHO05D006490 2.3e-12 79.3 286 25.9
ECA234G1901 Erigeron canadensis HOM05D005030 ORTHO05D006490 1.5e-11 76.6 160 30.6
Sc05g0004550 Simmondsia chinensis HOM05D005030 ORTHO05D006490 1.2e-10 73.6 86 51.2
Actinidia09824 Actinidia chinensis HOM05D005030 ORTHO05D001675 5.8e-08 64.7 56 55.4
CBR_g36663 Chara braunii HOM05D005030 ORTHO05D006490 5.8e-08 64.7 229 24.5
Sopen11g004310 Solanum pennellii HOM05D000399 ORTHO05D000304 1.1e-06 60.5 51 51.0


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