Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g10850 Coffea canephora HOM05D005631 ORTHO05D006765 3.0e-80 302.0 176 100.0
SGA_v2.0_scaffold20G09058 Striga asiatica HOM05D005631 ORTHO05D006765 5.9e-68 261.2 176 77.8
MSTRG.2645 Avicennia marina HOM05D005631 ORTHO05D006765 2.3e-67 259.2 176 81.8
Oeu059694.1 Olea europaea HOM05D005631 ORTHO05D006765 2.3e-67 259.2 176 79.0
SalBow1G1570 Salvia bowleyana HOM05D005631 ORTHO05D006765 6.5e-67 257.7 176 81.2
SGA_v2.0_scaffold18G08260 Striga asiatica HOM05D005631 ORTHO05D006765 7.2e-66 254.2 176 77.3
CSS0000896 Camellia sinensis var. sinensis HOM05D005631 ORTHO05D006765 9.5e-66 253.8 176 76.1
Eucgr.B04002 Eucalyptus grandis HOM05D005631 ORTHO05D006765 8.0e-65 250.8 176 81.8
Gohir.A03G025600 Gossypium hirsutum HOM05D005631 ORTHO05D006765 1.2e-63 246.9 176 73.3
Gohir.D03G142900 Gossypium hirsutum HOM05D005631 ORTHO05D006765 1.2e-63 246.9 176 73.3
Gorai.003G150100 Gossypium raimondii HOM05D005631 ORTHO05D006765 1.2e-63 246.9 176 73.3
Actinidia23857 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.6e-63 245.7 176 73.9
Manes.02G211700 Manihot esculenta HOM05D005631 ORTHO05D006765 2.6e-63 245.7 176 73.9
Hma1.2p1_1586F.1_g292190 Hydrangea macrophylla HOM05D005631 ORTHO05D006765 4.4e-63 245.0 176 73.9
Lsat_1_v5_gn_6_47101 Lactuca sativa HOM05D005631 ORTHO05D006765 7.5e-63 244.2 176 73.3
Thecc.09G357600 Theobroma cacao HOM05D005631 ORTHO05D006765 7.5e-63 244.2 176 73.3
Cfa011776 Carpinus fangiana HOM05D005631 ORTHO05D006765 9.8e-63 243.8 176 73.3
Cpa.g.sc2.358 Carica papaya HOM05D005631 ORTHO05D006765 1.7e-62 243.0 176 74.4
Rhsim01G0240900 Rhododendron simsii HOM05D005631 ORTHO05D006765 1.7e-62 243.0 178 74.2
Glyma.18G057300 Glycine max HOM05D005631 ORTHO05D006765 2.2e-62 242.7 176 74.4
TAR633G1157 Trochodendron aralioides HOM05D005631 ORTHO05D006765 2.8e-62 242.3 176 78.4
Migut.H00695 Erythranthe guttata HOM05D005631 ORTHO05D006765 4.9e-62 241.5 176 72.2
PGR102G0278 Punica granatum HOM05D005631 ORTHO05D006765 4.9e-62 241.5 176 76.7
HanXRQChr10g0284941 Helianthus annuus HOM05D005631 ORTHO05D006765 8.3e-62 240.7 176 73.3
ClCG02G019260 Citrullus lanatus HOM05D005631 ORTHO05D006765 1.1e-61 240.4 176 72.2
CsaV3_6G015890 Cucumis sativus L. HOM05D005631 ORTHO05D006765 1.1e-61 240.4 176 72.2
Hund18954 Selenicereus undatus HOM05D000127 ORTHO05D006765 1.4e-61 240.0 176 72.7
Ca_15010_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 2.4e-61 239.2 176 73.3
MELO3C025697.2 Cucumis melo HOM05D005631 ORTHO05D006765 4.1e-61 238.4 176 71.6
Potri.013G152600 Populus trichocarpa HOM05D005631 ORTHO05D006765 5.4e-61 238.0 176 71.6
Ciclev10029319m.g Citrus clementina HOM05D005631 ORTHO05D006765 7.0e-61 237.7 167 76.6
QL01p026260 Quercus lobata HOM05D005631 ORTHO05D006765 7.0e-61 237.7 176 71.6
DCAR_004046 Daucus carota HOM05D005631 ORTHO05D006765 9.2e-61 237.3 176 72.2
Glyma.11G164100 Glycine max HOM05D005631 ORTHO05D006765 9.2e-61 237.3 176 73.3
Sabra13G0122700 Salix brachista HOM05D005631 ORTHO05D006765 1.2e-60 236.9 176 71.6
vmacro14621 Vaccinium macrocarpon HOM05D005631 ORTHO05D006765 1.6e-60 236.5 179 72.1
GSVIVG01033331001 Vitis vinifera HOM05D005631 ORTHO05D006765 1.6e-60 236.5 174 72.4
Nitab4.5_0003548g0030 Nicotiana tabacum HOM05D005631 ORTHO05D006765 2.7e-60 235.7 176 73.3
Sed0015217 Sechium edule HOM05D005631 ORTHO05D006765 3.5e-60 235.3 176 71.0
Lalb_Chr15g0083281 Lupinus albus HOM05D005631 ORTHO05D006765 4.5e-60 235.0 176 72.7
Nitab4.5_0000438g0150 Nicotiana tabacum HOM05D005631 ORTHO05D006765 4.5e-60 235.0 176 76.1
Atru.chr3.4122 Acer truncatum HOM05D005631 ORTHO05D006765 5.9e-60 234.6 176 73.3
CAN.G354.39 Capsicum annuum HOM05D005631 ORTHO05D006765 1.3e-59 233.4 176 72.2
ECA248G0403 Erigeron canadensis HOM05D005631 ORTHO05D006765 1.3e-59 233.4 168 81.0
arahy.Tifrunner.gnm1.ann1.I7JS5F Arachis hypogaea HOM05D005631 ORTHO05D006765 1.7e-59 233.0 177 74.0
Medtr3g465690 Medicago truncatula HOM05D005631 ORTHO05D006765 1.7e-59 233.0 176 72.2
arahy.Tifrunner.gnm1.ann1.7E53FC Arachis hypogaea HOM05D005631 ORTHO05D006765 3.8e-59 231.9 184 69.0
MD03G1056300 Malus domestica HOM05D005631 ORTHO05D006765 5.0e-59 231.5 176 72.2
PGSC0003DMG400022531 Solanum tuberosum HOM05D005631 ORTHO05D006765 1.5e-58 229.9 176 72.2
Solyc03g033480.4 Solanum lycopersicum HOM05D005631 ORTHO05D006765 1.9e-58 229.6 176 72.2
Prupe.6G048500 Prunus persica HOM05D005631 ORTHO05D006765 3.3e-58 228.8 176 71.0
unitig_899.g14680 Utricularia gibba HOM05D005631 ORTHO05D006765 5.6e-58 228.0 176 78.4
Nn1g05206 Nelumbo nucifera HOM05D005631 ORTHO05D006765 1.6e-57 226.5 176 71.0
ATR0304G021 Amborella trichopoda HOM05D005631 ORTHO05D006765 2.1e-57 226.1 176 70.5
CANSAT54G1076 Cannabis sativa HOM05D005631 ORTHO05D006765 2.8e-57 225.7 176 69.9
RcHm_v2.0_Chr5g0071621 Rosa chinensis HOM05D005631 ORTHO05D006765 3.6e-57 225.3 176 71.0
Sopen03g006230 Solanum pennellii HOM05D005631 ORTHO05D006765 8.0e-57 224.2 176 71.0
MD11G1057500 Malus domestica HOM05D005631 ORTHO05D006765 1.0e-56 223.8 176 69.3
FAN11G1428 Fragaria x ananassa HOM05D005631 ORTHO05D006765 3.0e-56 222.2 176 70.5
FAN16G0042 Fragaria x ananassa HOM05D005631 ORTHO05D006765 3.0e-56 222.2 176 70.5
Lj6g0005877 Lotus japonicus HOM05D005631 ORTHO05D006765 5.2e-56 221.5 177 71.2
FAN21G1424 Fragaria x ananassa HOM05D005631 ORTHO05D006765 6.8e-56 221.1 176 70.5
Aqoxy1G01288 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 8.9e-56 220.7 169 76.9
FvH4_3g39740 Fragaria vesca HOM05D005631 ORTHO05D006765 8.9e-56 220.7 176 69.9
HPP92_019076 Vanilla planifolia HOM05D005631 ORTHO05D006765 1.5e-55 219.9 176 66.5
PSO349G0142 Papaver somniferum HOM05D005631 ORTHO05D006765 4.4e-55 218.4 177 67.8
FAN25G2299 Fragaria x ananassa HOM05D005631 ORTHO05D006765 1.2e-52 210.3 176 67.0
THA.LOC104810692 Tarenaya hassleriana HOM05D005631 ORTHO05D006765 1.2e-52 210.3 176 67.6
VMungo1383G2760 Vigna mungo HOM05D005631 ORTHO05D006765 2.7e-52 209.1 154 73.4
A03p12230 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-51 206.8 176 65.9
C03p14340 Brassica napus HOM05D005631 ORTHO05D006765 1.3e-51 206.8 176 65.9
BraA03t10534Z Brassica rapa HOM05D005631 ORTHO05D006765 1.3e-51 206.8 176 65.9
C09p50330 Brassica napus HOM05D005631 ORTHO05D006765 2.3e-51 206.1 176 65.3
A10p15820 Brassica napus HOM05D005631 ORTHO05D006765 3.0e-51 205.7 176 65.3
BolC3t13878H Brassica oleracea HOM05D005631 ORTHO05D006765 3.0e-51 205.7 176 64.8
BraA10t43643Z Brassica rapa HOM05D005631 ORTHO05D006765 3.0e-51 205.7 176 65.3
AL7G45820 Arabidopsis lyrata HOM05D005631 ORTHO05D006765 3.9e-51 205.3 176 65.9
Os03g0367800 Oryza sativa ssp. japonica HOM05D005631 ORTHO05D006765 6.6e-51 204.5 175 63.4
BcaB08g36180 Brassica carinata HOM05D005631 ORTHO05D006765 8.6e-51 204.1 176 64.8
BcaC04g19866 Brassica carinata HOM05D005631 ORTHO05D006765 8.6e-51 204.1 176 64.8
BolC9t57889H Brassica oleracea HOM05D005631 ORTHO05D006765 8.6e-51 204.1 176 64.8
AT5G37055 Arabidopsis thaliana HOM05D005631 ORTHO05D006765 1.5e-50 203.4 176 64.8
Carub.0007s3232 Capsella rubella HOM05D005631 ORTHO05D006765 3.3e-50 202.2 176 63.6
Aa31LG11G240 Aethionema arabicum HOM05D000127 ORTHO05D007184 4.3e-50 201.8 176 61.4
CARHR272280 Cardamine hirsuta HOM05D005631 ORTHO05D006765 4.3e-50 201.8 176 63.1
Thhalv10014837m.g Eutrema salsugineum HOM05D005631 ORTHO05D006765 1.2e-49 200.3 176 64.8
Oeu059678.1 Olea europaea HOM05D005631 ORTHO05D006765 4.7e-49 198.4 154 72.1
COL.COLO4_11152 Corchorus olitorius HOM05D005631 ORTHO05D006765 8.0e-49 197.6 141 74.5
Ca_15008_v3 Cicer arietinum L. HOM05D005631 ORTHO05D006765 6.8e-48 194.5 152 71.7
Zm00001eb195120 Zea mays HOM05D005631 ORTHO05D006765 2.0e-47 193.0 175 60.6
Phvul.006G073900 Phaseolus vulgaris HOM05D005631 ORTHO05D006765 5.8e-47 191.4 154 68.8
SEGI_31870 Sequoiadendron giganteum HOM05D005631 ORTHO05D006765 1.4e-45 186.8 142 69.7
Peaxi162Scf00635g00621 Petunia axillaris HOM05D005631 ORTHO05D006765 7.8e-44 181.0 176 66.5
Mapoly0066s0110 Marchantia polymorpha HOM05D005631 ORTHO05D006765 3.0e-43 179.1 178 55.6
Atru.chr3.4121 Acer truncatum HOM05D005631 ORTHO05D006765 2.5e-42 176.0 168 65.5
EL10Ac7g15917 Beta vulgaris HOM05D005631 ORTHO05D006765 4.3e-42 175.3 180 56.1
Pp3c4_18980 Physcomitrium patens HOM05D005631 ORTHO05D006765 5.6e-42 174.9 180 57.2
Sabra06G0125700 Salix brachista HOM05D005631 ORTHO05D006765 6.2e-41 171.4 156 62.8
SMO134G0149 Selaginella moellendorffii HOM05D005631 ORTHO05D006765 6.8e-40 167.9 180 53.9
Psat5g026160 Pisum sativum HOM05D005631 ORTHO05D006765 2.6e-39 166.0 139 74.1
TPR.G25706 Trifolium pratense HOM05D005631 ORTHO05D006765 2.9e-38 162.5 139 69.1
AUR62009671 Chenopodium quinoa HOM05D005631 ORTHO05D006765 2.5e-34 149.4 139 66.9
AUR62001872 Chenopodium quinoa HOM05D005631 ORTHO05D006765 2.1e-33 146.4 139 64.7
VMungo0540G1856 Vigna mungo HOM05D005631 ORTHO05D006765 1.4e-32 143.7 118 67.8
BcaB01g04521 Brassica carinata HOM05D005631 ORTHO05D006765 9.2e-29 131.0 156 53.8
AagrBONN_evm.TU.Sc2ySwM_117.69 Anthoceros agrestis HOM05D005631 ORTHO05D006765 1.5e-26 123.6 176 41.5
Duzib150G1412 Durio zibethinus HOM05D005631 ORTHO05D006765 4.3e-26 122.1 117 61.5
Sc21g0005270 Simmondsia chinensis HOM05D005631 ORTHO05D006765 2.6e-23 112.8 108 75.0
Actinidia34479 Actinidia chinensis HOM05D005631 ORTHO05D006765 2.9e-22 109.4 111 61.3
MCO05G013 Micromonas commoda HOM05D005631 ORTHO05D006765 2.9e-22 109.4 167 49.1
CiPaw.13G069500 Carya illinoinensis HOM05D005631 ORTHO05D006765 8.4e-22 107.8 108 59.3
CDE09G1253 Ceratophyllum demersum HOM05D001009 ORTHO05D000829 3.5e-20 102.4 114 57.9
Cc05_g02510 Coffea canephora HOM05D005631 ORTHO05D006765 8.7e-19 97.8 110 69.1
Oeu008095.1 Olea europaea HOM05D005631 ORTHO05D006765 1.2e-15 87.4 58 82.8
Sp6g20150 Schrenkiella parvula HOM05D000127 ORTHO05D007184 1.2e-15 87.4 107 55.1
CDE02G1786 Ceratophyllum demersum HOM05D005631 ORTHO05D006765 3.5e-12 75.9 124 45.2
Oeu008088.1 Olea europaea HOM05D005631 ORTHO05D006765 4.6e-12 75.5 68 60.3
Sabra19G0122200 Salix brachista HOM05D005631 ORTHO05D006765 1.5e-10 70.5 93 49.5
Sabra16G0029400 Salix brachista HOM05D005631 ORTHO05D006765 2.8e-09 66.2 100 44.0
MBI18_g07568_MAGBIO Magnolia biondii HOM05D005631 ORTHO05D006765 6.2e-09 65.1 55 61.8
BcaC09g51457 Brassica carinata HOM05D005631 ORTHO05D006765 6.9e-08 61.6 49 67.3
A08p25520 Brassica napus HOM05D005631 ORTHO05D006765 6.9e-08 61.6 49 67.3
Aqoxy1G01289 Aquilegia oxysepala HOM05D005631 ORTHO05D006765 2.0e-07 60.1 46 69.6
BcaC05g26847 Brassica carinata HOM05D005631 ORTHO05D006765 2.0e-07 60.1 49 65.3
C01p12950 Brassica napus HOM05D005631 ORTHO05D006765 2.6e-07 59.7 43 72.1
Sabra19G0131600 Salix brachista HOM05D005631 ORTHO05D006765 2.6e-07 59.7 97 46.4
BcaC09g51408 Brassica carinata HOM05D005631 ORTHO05D006765 9.9e-07 57.8 45 66.7
C01p13430 Brassica napus HOM05D005631 ORTHO05D006765 9.9e-07 57.8 43 69.8
BcaC08g44597 Brassica carinata HOM05D005631 ORTHO05D006765 1.7e-06 57.0 50 66.0
BolC1t05347H Brassica oleracea HOM05D005631 ORTHO05D006765 2.2e-06 56.6 49 61.2
A07p13430 Brassica napus HOM05D005631 ORTHO05D006765 3.8e-06 55.8 49 67.3
C04p57300 Brassica napus HOM05D005631 ORTHO05D006765 3.8e-06 55.8 43 67.4
Sabra07G0096200 Salix brachista HOM05D005274 ORTHO05D006765 3.8e-06 55.8 92 44.6


User provided reference genes

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