Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g06700 Coffea canephora HOM05D004966 ORTHO05D006199 0.0e+00 1579.3 1059 100.0
Actinidia32817 Actinidia chinensis HOM05D004966 ORTHO05D006199 0.0e+00 1128.6 1063 78.9
Nitab4.5_0000868g0040 Nicotiana tabacum HOM05D004966 ORTHO05D006199 0.0e+00 1083.9 1068 75.9
Oeu013276.1 Olea europaea HOM05D004966 ORTHO05D006199 9.3e-310 1067.0 1061 65.6
Sopen02g037320 Solanum pennellii HOM05D004966 ORTHO05D006199 5.1e-308 1061.2 1067 74.7
Solyc02g092780.3 Solanum lycopersicum HOM05D004966 ORTHO05D006199 3.4e-304 1048.5 1067 74.2
Prupe.6G225100 Prunus persica HOM05D004966 ORTHO05D006199 3.2e-302 1042.0 1064 74.6
Hma1.2p1_0017F.1_g012040 Hydrangea macrophylla HOM05D004966 ORTHO05D006199 3.9e-300 1035.0 1061 74.6
Rhsim08G0096300 Rhododendron simsii HOM05D004966 ORTHO05D006199 2.4e-297 1025.8 1093 72.9
Migut.H00376 Erythranthe guttata HOM05D004966 ORTHO05D006199 6.9e-297 1024.2 1056 75.6
MSTRG.23699 Avicennia marina HOM05D004966 ORTHO05D006199 1.5e-296 1023.1 1066 73.9
MD02G1181200 Malus domestica HOM05D004966 ORTHO05D006199 1.5e-296 1023.1 1065 73.2
Glyma.17G164600 Glycine max HOM05D004966 ORTHO05D006199 2.6e-296 1022.3 1058 73.3
Duzib147G1627 Durio zibethinus HOM05D004966 ORTHO05D006199 3.8e-295 1018.5 1121 70.3
Gorai.007G220700 Gossypium raimondii HOM05D004966 ORTHO05D006199 1.4e-294 1016.5 1126 71.0
Gohir.D11G205500 Gossypium hirsutum HOM05D004966 ORTHO05D006199 2.5e-294 1015.8 1124 71.3
CSS0024631 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.2e-294 1015.4 1081 74.4
Gohir.A11G217900 Gossypium hirsutum HOM05D004966 ORTHO05D006199 3.2e-294 1015.4 1125 71.3
Ca_24712_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 2.7e-293 1012.3 1066 73.6
Ca_24727_v3 Cicer arietinum L. HOM05D004966 ORTHO05D006199 2.7e-293 1012.3 1066 73.6
Lj2g0010110 Lotus japonicus HOM05D004966 ORTHO05D006199 2.3e-292 1009.2 1075 72.6
RcHm_v2.0_Chr2g0107271 Rosa chinensis HOM05D004966 ORTHO05D006199 2.6e-291 1005.7 1087 72.7
Ciclev10024760m.g Citrus clementina HOM05D004966 ORTHO05D006199 3.7e-290 1001.9 1123 70.6
CANSAT01G2710 Cannabis sativa HOM05D004966 ORTHO05D006199 1.1e-289 1000.3 1062 73.5
Thecc.01G067600 Theobroma cacao HOM05D004966 ORTHO05D006199 1.1e-289 1000.3 1106 70.7
Potri.007G052200 Populus trichocarpa HOM05D004966 ORTHO05D006199 1.8e-289 999.6 1108 71.4
Hund16378 Selenicereus undatus HOM05D004966 ORTHO05D006199 5.3e-289 998.0 1068 71.5
Atru.chr3.210 Acer truncatum HOM05D004966 ORTHO05D006199 1.2e-288 996.9 1119 70.3
VMungo0251G2147 Vigna mungo HOM05D004966 ORTHO05D006199 1.2e-288 996.9 1065 72.0
Glyma.05G102400 Glycine max HOM05D004966 ORTHO05D006199 4.5e-288 995.0 1057 71.9
Glyma.01G191100 Glycine max HOM05D004966 ORTHO05D006199 1.0e-287 993.8 1079 72.4
Manes.12G112800 Manihot esculenta HOM05D004966 ORTHO05D006199 1.5e-286 989.9 1113 69.7
Phvul.003G238000 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.9e-286 989.6 1057 72.4
ECA238G2979 Erigeron canadensis HOM05D004966 ORTHO05D006199 4.7e-285 984.9 1070 72.2
PGR004G2163 Punica granatum HOM05D004966 ORTHO05D006199 2.3e-284 982.6 1054 73.0
TPR.G20946 Trifolium pratense HOM05D004966 ORTHO05D006199 4.0e-284 981.9 1068 72.4
Medtr5g016190 Medicago truncatula HOM05D004966 ORTHO05D006199 8.8e-284 980.7 1066 72.1
Cfa004090 Carpinus fangiana HOM05D004966 ORTHO05D006199 1.2e-283 980.3 1060 72.6
Sed0025120 Sechium edule HOM05D004966 ORTHO05D006199 4.4e-283 978.4 1061 70.9
COL.COLO4_11522 Corchorus olitorius HOM05D004966 ORTHO05D006199 7.5e-283 977.6 1140 68.2
arahy.Tifrunner.gnm1.ann1.138YHT Arachis hypogaea HOM05D004966 ORTHO05D006199 2.8e-282 975.7 1061 70.9
Sabra07G0045800 Salix brachista HOM05D004966 ORTHO05D006199 1.6e-280 969.9 1110 70.1
Eucgr.I00728 Eucalyptus grandis HOM05D004966 ORTHO05D006199 3.5e-280 968.8 1075 71.3
Sc16g0004960 Simmondsia chinensis HOM05D004966 ORTHO05D006199 1.3e-279 966.8 1064 72.2
CsaV3_6G043790 Cucumis sativus L. HOM05D004966 ORTHO05D006199 1.6e-277 959.9 1063 70.2
SGA_v2.0_scaffold15G07400 Striga asiatica HOM05D004966 ORTHO05D006199 4.0e-276 955.3 1151 50.4
Lj4g0015306 Lotus japonicus HOM05D004966 ORTHO05D006199 4.4e-275 951.8 1059 71.6
EL10Ac6g15665 Beta vulgaris HOM05D004966 ORTHO05D006199 1.7e-274 949.9 1063 70.8
Nitab4.5_0001439g0170 Nicotiana tabacum HOM05D004966 ORTHO05D006199 3.7e-274 948.7 1067 70.9
Haze_15324 Corylus avellana HOM05D004966 ORTHO05D006199 3.1e-273 945.7 1060 71.5
FAN19G1580 Fragaria x ananassa HOM05D004966 ORTHO05D006199 4.1e-273 945.3 1082 70.9
FvH4_1g17100 Fragaria vesca HOM05D004966 ORTHO05D006199 1.6e-272 943.3 1082 70.8
THA.LOC104807611 Tarenaya hassleriana HOM05D004966 ORTHO05D006199 1.6e-272 943.3 1082 68.3
Aqoxy6G02774 Aquilegia oxysepala HOM05D004966 ORTHO05D006199 7.7e-272 941.0 1060 71.6
TWI73G0630 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 1.7e-271 939.9 1121 67.2
DCAR_010836 Daucus carota HOM05D004966 ORTHO05D006199 3.8e-271 938.7 1099 68.5
TWI09G0336 Tripterygium wilfordii HOM05D004966 ORTHO05D006199 3.2e-270 935.6 1110 67.6
TAR625G0217 Trochodendron aralioides HOM05D004966 ORTHO05D006199 9.5e-270 934.1 1060 72.1
arahy.Tifrunner.gnm1.ann1.EHFU3U Arachis hypogaea HOM05D004966 ORTHO05D006199 2.8e-269 932.6 1077 69.5
vmacro17983 Vaccinium macrocarpon HOM05D004966 ORTHO05D006199 3.0e-268 929.1 1213 50.1
arahy.Tifrunner.gnm1.ann1.E3XCDG Arachis hypogaea HOM05D004966 ORTHO05D006199 5.2e-268 928.3 1077 69.3
Duzib187G0681 Durio zibethinus HOM05D004966 ORTHO05D006199 5.2e-268 928.3 1109 68.4
HanXRQChr14g0441841 Helianthus annuus HOM05D004966 ORTHO05D006199 3.4e-267 925.6 1064 70.0
GSVIVG01000163001 Vitis vinifera HOM05D004966 ORTHO05D006199 3.7e-266 922.2 1062 70.5
Lsat_1_v5_gn_2_83581 Lactuca sativa HOM05D004966 ORTHO05D006199 4.1e-265 918.7 1057 69.3
Nn5g30492 Nelumbo nucifera HOM05D004966 ORTHO05D006199 3.5e-264 915.6 1060 69.9
AL7G13330 Arabidopsis lyrata HOM05D004966 ORTHO05D006199 4.5e-264 915.2 1069 66.3
Carub.0007s0282 Capsella rubella HOM05D004966 ORTHO05D006199 1.3e-263 913.7 1097 65.4
FAN26G1585 Fragaria x ananassa HOM05D004966 ORTHO05D006199 2.9e-263 912.5 1071 69.9
FAN28G1348 Fragaria x ananassa HOM05D004966 ORTHO05D006199 3.8e-263 912.1 1074 70.0
BcaNung05081 Brassica carinata HOM05D004966 ORTHO05D006199 3.3e-262 909.1 1072 65.7
Lalb_Chr05g0226061 Lupinus albus HOM05D004966 ORTHO05D006199 2.8e-261 906.0 1063 69.8
Lj4C159G2 Lonicera japonica HOM05D004966 ORTHO05D006199 6.1e-261 904.8 1062 68.9
C01p01650 Brassica napus HOM05D004966 ORTHO05D006199 8.9e-260 901.0 1076 65.4
BolC1t00159H Brassica oleracea HOM05D004966 ORTHO05D006199 1.3e-258 897.1 1077 65.2
A01p01480 Brassica napus HOM05D004966 ORTHO05D006199 8.3e-258 894.4 1067 65.6
BraA01t00142Z Brassica rapa HOM05D004966 ORTHO05D006199 1.2e-256 890.6 1074 62.0
arahy.Tifrunner.gnm1.ann1.E99DR7 Arachis hypogaea HOM05D004966 ORTHO05D006199 1.5e-254 883.6 1061 67.6
PSO541G4192 Papaver somniferum HOM05D004966 ORTHO05D006199 1.5e-254 883.6 1059 68.3
AUR62038275 Chenopodium quinoa HOM05D004966 ORTHO05D006199 8.0e-253 877.9 1069 67.1
PSO675G4881 Papaver somniferum HOM05D004966 ORTHO05D006199 4.0e-252 875.5 1059 67.9
MELO3C007603.2 Cucumis melo HOM05D004966 ORTHO05D006199 6.8e-252 874.8 1073 62.2
AT4G37460 Arabidopsis thaliana HOM05D004966 ORTHO05D006199 1.5e-251 873.6 1078 64.9
AUR62003963 Chenopodium quinoa HOM05D004966 ORTHO05D006199 9.8e-251 870.9 1061 68.3
Aa31LG6G14330 Aethionema arabicum HOM05D004966 ORTHO05D006199 8.3e-250 867.8 1103 63.8
CARHR245860 Cardamine hirsuta HOM05D004966 ORTHO05D006199 8.1e-245 851.3 1073 64.0
BcaNung03662 Brassica carinata HOM05D004966 ORTHO05D006199 2.7e-240 836.3 1036 65.0
Dinv30059 Davidia involucrata HOM05D004966 ORTHO05D006199 3.6e-237 825.9 926 75.8
Peaxi162Scf00264g00044 Petunia axillaris HOM05D004966 ORTHO05D006199 1.5e-235 820.5 990 63.1
Psat2g169880 Pisum sativum HOM05D004966 ORTHO05D006199 1.5e-235 820.5 910 74.6
CAN.G1075.3 Capsicum annuum HOM05D004966 ORTHO05D006199 4.1e-233 812.4 487 79.5
ClCG01G017250 Citrullus lanatus HOM05D004966 ORTHO05D006199 3.0e-231 806.2 1063 65.7
CiPaw.01G008200 Carya illinoinensis HOM05D004966 ORTHO05D006199 1.8e-228 797.0 485 78.4
MD15G1292200 Malus domestica HOM05D004966 ORTHO05D006199 3.1e-220 769.6 488 74.2
Phvul.002G013932 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 1.3e-218 764.2 489 75.7
CSS0020625 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.9e-218 762.3 827 65.5
Os07g0113700 Oryza sativa ssp. japonica HOM05D004966 ORTHO05D006199 3.3e-214 749.6 1062 58.6
Zm00001eb118220 Zea mays HOM05D004966 ORTHO05D006199 7.4e-214 748.4 1058 55.4
MBI16_g06665_MAGBIO Magnolia biondii HOM05D004966 ORTHO05D006199 3.9e-207 726.1 488 71.9
SEGI_23316 Sequoiadendron giganteum HOM05D004966 ORTHO05D006199 4.9e-202 709.1 1056 60.1
unitig_62.g23418 Utricularia gibba HOM05D004966 ORTHO05D006199 1.5e-187 661.0 989 58.3
Thhalv10024286m.g Eutrema salsugineum HOM05D004966 ORTHO05D006199 4.1e-180 636.3 934 63.7
ATR0661G243 Amborella trichopoda HOM05D004966 ORTHO05D006199 5.9e-179 632.5 482 64.7
TAR381G1622 Trochodendron aralioides HOM05D004966 ORTHO05D006199 2.2e-165 587.4 858 69.2
Pp3c2_36070 Physcomitrium patens HOM05D004966 ORTHO05D006199 5.6e-145 519.6 1046 46.0
Ah.03g146320 Amaranthus hybridus HOM05D004966 ORTHO05D006199 1.4e-143 515.0 443 59.8
Lalb_Chr16g0389071 Lupinus albus HOM05D004966 ORTHO05D006199 4.9e-141 506.5 795 69.3
Mapoly0153s0004 Marchantia polymorpha HOM05D004966 ORTHO05D006199 1.1e-132 478.8 1048 46.3
Lalb_Chr16g0389061 Lupinus albus HOM05D004966 ORTHO05D006199 6.4e-109 399.8 253 73.1
CBR_g36368 Chara braunii HOM05D004966 ORTHO05D006199 1.4e-100 372.1 537 39.5
BolC7t46655H Brassica oleracea HOM05D004966 ORTHO05D006199 5.4e-100 370.2 900 35.3
Sp7g35120 Schrenkiella parvula HOM05D004966 ORTHO05D006199 6.7e-98 363.2 715 58.0
CAN.G1075.4 Capsicum annuum HOM05D004966 ORTHO05D006199 3.5e-91 340.9 355 54.9
Dinv26891 Davidia involucrata HOM05D004966 ORTHO05D006199 7.9e-91 339.7 296 60.1
MD15G1292300 Malus domestica HOM05D004966 ORTHO05D006199 1.0e-90 339.3 354 55.9
Cpa.g.sc1082.1 Carica papaya HOM05D004966 ORTHO05D006199 1.8e-87 328.6 201 75.6
Cre01.g021450 Chlamydomonas reinhardtii HOM05D004966 ORTHO05D006199 2.0e-73 282.0 452 38.7
FAN23G2362 Fragaria x ananassa HOM05D004966 ORTHO05D006199 6.9e-71 273.5 353 48.7
C07p62400 Brassica napus HOM05D004966 ORTHO05D006199 1.9e-68 265.4 899 30.4
BcaNung02943 Brassica carinata HOM05D004966 ORTHO05D006199 1.1e-65 256.1 167 73.1
Duzib264G0118 Durio zibethinus HOM05D004966 ORTHO05D006199 5.3e-63 247.3 265 52.8
CiPaw.01G008100 Carya illinoinensis HOM05D004966 ORTHO05D006199 5.0e-61 240.7 316 51.9
Cpa.g.sc6.59 Carica papaya HOM05D004966 ORTHO05D006199 4.7e-51 207.6 198 56.6
Cpa.g.sc6.60 Carica papaya HOM05D004966 ORTHO05D006199 2.8e-40 171.8 99 78.8
CSS0040429 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 4.8e-40 171.0 93 91.4
A03p65150 Brassica napus HOM05D004966 ORTHO05D006199 1.8e-39 169.1 130 64.6
BraA03t15573Z Brassica rapa HOM05D004966 ORTHO05D006199 1.8e-39 169.1 130 64.6
BcaNung02944 Brassica carinata HOM05D004966 ORTHO05D006199 3.1e-39 168.3 136 57.4
CSS0022043 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.0e-37 163.3 112 73.2
Glyma.11G051067 Glycine max HOM05D004966 ORTHO05D006199 2.1e-35 155.6 123 65.9
Ah.03g146310 Amaranthus hybridus HOM05D004966 ORTHO05D006199 8.0e-35 153.7 93 78.5
Glyma.11G051133 Glycine max HOM05D004966 ORTHO05D006199 5.2e-34 151.0 180 46.7
Phvul.002G013866 Phaseolus vulgaris HOM05D004966 ORTHO05D006199 2.2e-32 145.6 210 43.8
BcaNung02945 Brassica carinata HOM05D004966 ORTHO05D006199 4.5e-30 137.9 93 71.0
CSS0006661 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 3.6e-27 128.3 74 74.3
RcHm_v2.0_Chr1g0315291 Rosa chinensis HOM05D004966 ORTHO05D006199 1.0e-26 126.7 83 73.5
BcaNung02055 Brassica carinata HOM05D004966 ORTHO05D006199 1.9e-23 115.9 105 59.0
Oeu011609.3 Olea europaea HOM05D004966 ORTHO05D006199 5.4e-23 114.4 142 45.1
ATR0030G036 Amborella trichopoda HOM05D004966 ORTHO05D006199 9.2e-15 87.0 120 40.0
CBR_g36362 Chara braunii HOM05D004966 ORTHO05D006199 5.1e-13 81.3 195 31.3
CSS0042095 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.5e-12 79.7 45 84.4
Lsat_1_v5_gn_8_118440 Lactuca sativa HOM05D004966 ORTHO05D231273 1.7e-08 66.2 49 53.1
CSS0029353 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 6.4e-08 64.3 193 35.2
CSS0024681 Camellia sinensis var. sinensis HOM05D004966 ORTHO05D006199 1.2e-06 60.1 40 70.0
HanXRQChr06g0176501 Helianthus annuus HOM05D004966 ORTHO05D006199 1.6e-06 59.7 39 71.8


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