Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g02630 Coffea canephora HOM05D005035 ORTHO05D006141 1.9e-83 312.4 150 100.0
MSTRG.3309 Avicennia marina HOM05D005035 ORTHO05D006141 3.2e-70 268.5 147 85.0
Migut.H00159 Erythranthe guttata HOM05D005035 ORTHO05D006141 2.7e-69 265.4 149 84.6
Nitab4.5_0001952g0210 Nicotiana tabacum HOM05D005035 ORTHO05D006141 3.9e-68 261.5 146 83.6
Nitab4.5_0007185g0060 Nicotiana tabacum HOM05D005035 ORTHO05D006141 1.5e-67 259.6 148 82.4
CAN.G206.60 Capsicum annuum HOM05D005035 ORTHO05D006141 9.5e-67 256.9 146 80.8
Solyc02g087230.3 Solanum lycopersicum HOM05D005035 ORTHO05D006141 2.1e-66 255.8 147 82.3
Sopen02g031970 Solanum pennellii HOM05D005035 ORTHO05D006141 2.1e-66 255.8 147 82.3
Migut.K01356 Erythranthe guttata HOM05D005035 ORTHO05D006141 2.3e-65 252.3 147 81.6
Lsat_1_v5_gn_0_16560 Lactuca sativa HOM05D005035 ORTHO05D006141 5.2e-65 251.1 147 80.3
Peaxi162Scf00129g00821 Petunia axillaris HOM05D005035 ORTHO05D006141 2.0e-64 249.2 146 80.8
vmacro05790 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 5.8e-64 247.7 146 78.8
SalBow1G8037 Salvia bowleyana HOM05D005035 ORTHO05D006141 7.5e-64 247.3 156 79.5
MSTRG.23981 Avicennia marina HOM05D005035 ORTHO05D006141 1.7e-63 246.1 147 81.0
SGA_v2.0_scaffold30G12503 Striga asiatica HOM05D005035 ORTHO05D006141 1.7e-63 246.1 147 78.9
CSS0048749 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.9e-63 245.4 148 78.4
Cfa007472 Carpinus fangiana HOM05D005035 ORTHO05D006141 3.7e-63 245.0 150 78.0
HanXRQChr17g0548081 Helianthus annuus HOM05D005035 ORTHO05D006141 6.4e-63 244.2 148 77.7
Actinidia06042 Actinidia chinensis HOM05D005035 ORTHO05D006141 1.4e-62 243.0 148 77.7
CiPaw.03G034300 Carya illinoinensis HOM05D005035 ORTHO05D006141 4.1e-62 241.5 150 76.7
Prupe.3G278500 Prunus persica HOM05D005035 ORTHO05D006141 5.4e-62 241.1 150 78.7
Gohir.A07G217600 Gossypium hirsutum HOM05D005035 ORTHO05D006141 9.2e-62 240.4 143 79.0
GSVIVG01032540001 Vitis vinifera HOM05D005035 ORTHO05D006141 1.2e-61 240.0 147 76.9
Actinidia33975 Actinidia chinensis HOM05D005035 ORTHO05D006141 2.1e-61 239.2 150 78.0
Gohir.A09G024500 Gossypium hirsutum HOM05D005035 ORTHO05D006141 2.7e-61 238.8 135 80.7
Gohir.D07G224700 Gossypium hirsutum HOM05D005035 ORTHO05D006141 2.7e-61 238.8 143 78.3
Rhsim10G0028700 Rhododendron simsii HOM05D005035 ORTHO05D006141 2.7e-61 238.8 158 74.1
Nn4g22913 Nelumbo nucifera HOM05D005035 ORTHO05D006141 6.0e-61 237.7 140 80.0
Sc06g0002600 Simmondsia chinensis HOM05D005035 ORTHO05D006141 6.0e-61 237.7 147 77.6
TWI56G1217 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 7.8e-61 237.3 148 77.0
DCAR_011194 Daucus carota HOM05D005035 ORTHO05D006141 1.0e-60 236.9 152 75.0
MELO3C021510.2 Cucumis melo HOM05D005035 ORTHO05D006141 1.3e-60 236.5 124 87.1
CsaV3_5G037480 Cucumis sativus L. HOM05D005035 ORTHO05D006141 1.3e-60 236.5 124 87.1
RcHm_v2.0_Chr2g0170331 Rosa chinensis HOM05D005035 ORTHO05D006141 1.7e-60 236.1 150 75.3
Duzib147G0557 Durio zibethinus HOM05D005035 ORTHO05D006141 2.3e-60 235.7 148 77.0
MD17G1040500 Malus domestica HOM05D005035 ORTHO05D006141 2.3e-60 235.7 150 74.7
Manes.17G120300 Manihot esculenta HOM05D005035 ORTHO05D006141 2.3e-60 235.7 152 76.3
TWI36G0797 Tripterygium wilfordii HOM05D005035 ORTHO05D006141 2.3e-60 235.7 150 74.0
ECA246G3539 Erigeron canadensis HOM05D005035 ORTHO05D006141 3.0e-60 235.3 148 76.4
Rhsim10G0028000 Rhododendron simsii HOM05D005035 ORTHO05D006141 3.0e-60 235.3 167 70.1
PGR083G2790 Punica granatum HOM05D005035 ORTHO05D006141 3.9e-60 235.0 146 78.1
TAR484G0003 Trochodendron aralioides HOM05D005035 ORTHO05D006141 3.9e-60 235.0 146 78.8
TAR629G3150 Trochodendron aralioides HOM05D005035 ORTHO05D006141 3.9e-60 235.0 146 78.8
MD09G1039900 Malus domestica HOM05D005035 ORTHO05D006141 5.1e-60 234.6 150 76.0
CANSAT21G0423 Cannabis sativa HOM05D005035 ORTHO05D006141 8.6e-60 233.8 146 75.3
FvH4_6g50060 Fragaria vesca HOM05D005035 ORTHO05D006141 8.6e-60 233.8 150 75.3
FAN05G0554 Fragaria x ananassa HOM05D005035 ORTHO05D006141 8.6e-60 233.8 149 75.2
Lj2g0024232 Lotus japonicus HOM05D005035 ORTHO05D006141 8.6e-60 233.8 144 77.8
Thecc.04G003200 Theobroma cacao HOM05D005035 ORTHO05D006141 1.1e-59 233.4 143 76.9
Glyma.19G013800 Glycine max HOM05D005035 ORTHO05D006141 1.5e-59 233.0 150 76.0
Glyma.13G069100 Glycine max HOM05D005035 ORTHO05D006141 1.9e-59 232.6 150 76.0
Potri.001G350900 Populus trichocarpa HOM05D005035 ORTHO05D006141 5.6e-59 231.1 151 71.5
Ca_04227_v3 Cicer arietinum L. HOM05D005035 ORTHO05D006141 7.3e-59 230.7 150 74.7
Lsat_1_v5_gn_4_180660 Lactuca sativa HOM05D005035 ORTHO05D006141 9.5e-59 230.3 161 73.3
Manes.15G180500 Manihot esculenta HOM05D005035 ORTHO05D006141 1.6e-58 229.6 151 75.5
Eucgr.J02172 Eucalyptus grandis HOM05D005035 ORTHO05D006141 2.1e-58 229.2 146 76.0
Aqoxy3G00882 Aquilegia oxysepala HOM05D005035 ORTHO05D006141 3.6e-58 228.4 127 81.9
EL10Ac7g18004 Beta vulgaris HOM05D005035 ORTHO05D006141 3.6e-58 228.4 147 73.5
TPR.G31460 Trifolium pratense HOM05D005035 ORTHO05D006141 4.7e-58 228.0 145 73.8
Medtr6g008220 Medicago truncatula HOM05D005035 ORTHO05D006141 8.1e-58 227.3 145 74.5
Aa31LG9G1530 Aethionema arabicum HOM05D005035 ORTHO05D006141 1.1e-57 226.9 144 75.0
Ciclev10013034m.g Citrus clementina HOM05D005035 ORTHO05D006141 1.8e-57 226.1 141 76.6
MBI14_g12780_MAGBIO Magnolia biondii HOM05D005035 ORTHO05D006141 1.8e-57 226.1 147 74.8
Phvul.004G020500 Phaseolus vulgaris HOM05D005035 ORTHO05D006141 3.1e-57 225.3 150 73.3
TAR371G0568 Trochodendron aralioides HOM05D005035 ORTHO05D006141 3.1e-57 225.3 146 75.3
THA.LOC104805419 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 4.0e-57 224.9 126 81.0
Lalb_Chr02g0159811 Lupinus albus HOM05D005035 ORTHO05D006141 5.2e-57 224.6 150 74.0
Lalb_Chr21g0319261 Lupinus albus HOM05D005035 ORTHO05D006141 8.9e-57 223.8 149 73.2
AL3G42320 Arabidopsis lyrata HOM05D005035 ORTHO05D006141 1.2e-56 223.4 143 72.7
PSO591G0214 Papaver somniferum HOM05D005035 ORTHO05D006141 1.2e-56 223.4 146 72.6
AT2G04700 Arabidopsis thaliana HOM05D005035 ORTHO05D006141 1.5e-56 223.0 143 72.7
Carub.0003s2630 Capsella rubella HOM05D005035 ORTHO05D006141 1.5e-56 223.0 143 72.0
PSO832G3976 Papaver somniferum HOM05D005035 ORTHO05D006141 1.5e-56 223.0 140 73.6
Sp2g17120 Schrenkiella parvula HOM05D005035 ORTHO05D006141 1.5e-56 223.0 123 80.5
unitig_52.g17602 Utricularia gibba HOM05D005035 ORTHO05D006141 2.0e-56 222.6 133 80.5
Hund20034 Selenicereus undatus HOM05D005035 ORTHO05D006141 3.4e-56 221.9 136 77.9
Thhalv10027982m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 5.8e-56 221.1 143 73.4
Sp7g01920 Schrenkiella parvula HOM05D005035 ORTHO05D006141 5.8e-56 221.1 143 72.7
AagrBONN_evm.TU.Sc2ySwM_340.374 Anthoceros agrestis HOM05D005035 ORTHO05D006141 7.6e-56 220.7 118 83.1
Lalb_Chr06g0176451 Lupinus albus HOM05D005035 ORTHO05D006141 1.3e-55 219.9 146 71.2
Sabra16G0230300 Salix brachista HOM05D005035 ORTHO05D006141 1.3e-55 219.9 156 68.6
A04p12970 Brassica napus HOM05D005035 ORTHO05D006141 1.7e-55 219.5 129 77.5
Duzib264G0892 Durio zibethinus HOM05D005035 ORTHO05D006141 1.7e-55 219.5 132 77.3
BcaB06g27429 Brassica carinata HOM05D005035 ORTHO05D006141 2.2e-55 219.2 129 76.7
BolC4t26254H Brassica oleracea HOM05D005035 ORTHO05D006141 2.2e-55 219.2 129 76.7
BraA04t16958Z Brassica rapa HOM05D005035 ORTHO05D006141 2.2e-55 219.2 129 76.7
ClCG00G001700 Citrullus lanatus HOM05D005035 ORTHO05D006141 2.2e-55 219.2 172 64.0
ClCG09G018640 Citrullus lanatus HOM05D005035 ORTHO05D006141 2.2e-55 219.2 172 64.0
Thhalv10005082m.g Eutrema salsugineum HOM05D005035 ORTHO05D006141 2.9e-55 218.8 147 72.8
Mapoly0037s0068 Marchantia polymorpha HOM05D005035 ORTHO05D006141 2.9e-55 218.8 117 82.1
unitig_62.g23432 Utricularia gibba HOM05D005035 ORTHO05D006141 3.8e-55 218.4 136 78.7
COL.COLO4_06152 Corchorus olitorius HOM05D005035 ORTHO05D006141 6.4e-55 217.6 132 76.5
QL93p0205_0142 Quercus lobata HOM05D005035 ORTHO05D006141 6.4e-55 217.6 160 65.6
Gorai.001G259100 Gossypium raimondii HOM05D005035 ORTHO05D006141 1.1e-54 216.9 128 78.1
CDE04G0448 Ceratophyllum demersum HOM05D005035 ORTHO05D006141 2.4e-54 215.7 128 75.8
Hma1.2p1_0375F.1_g139040 Hydrangea macrophylla HOM05D005035 ORTHO05D006141 3.2e-54 215.3 141 71.6
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 4.1e-54 214.9 141 72.3
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 4.1e-54 214.9 141 72.3
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 5.4e-54 214.5 141 72.3
HPP92_003737 Vanilla planifolia HOM05D005035 ORTHO05D006141 9.2e-54 213.8 139 71.2
Psat1g079560 Pisum sativum HOM05D005035 ORTHO05D006141 6.0e-53 211.1 137 70.8
SMO147G0038 Selaginella moellendorffii HOM05D005035 ORTHO05D006141 3.9e-52 208.4 112 82.1
ATR1101G065 Amborella trichopoda HOM05D005035 ORTHO05D006141 2.5e-51 205.7 142 72.5
Pp3c4_19340 Physcomitrium patens HOM05D005035 ORTHO05D006141 5.6e-51 204.5 114 78.9
VMungo0464G2121 Vigna mungo HOM05D005035 ORTHO05D006141 1.2e-50 203.4 159 62.9
AUR62041855 Chenopodium quinoa HOM05D005035 ORTHO05D006141 2.1e-50 202.6 172 60.5
Sed0002098 Sechium edule HOM05D005035 ORTHO05D006141 2.1e-50 202.6 119 79.0
Zm00001eb373700 Zea mays HOM05D005035 ORTHO05D006141 3.6e-50 201.8 154 64.3
Pp3c3_28450 Physcomitrium patens HOM05D005035 ORTHO05D006141 1.4e-49 199.9 114 77.2
Os09g0249900 Oryza sativa ssp. japonica HOM05D005035 ORTHO05D006141 2.4e-49 199.1 138 66.7
MCO16G017 Micromonas commoda HOM05D005035 ORTHO05D006141 3.1e-49 198.7 125 71.2
THA.LOC104822811 Tarenaya hassleriana HOM05D005035 ORTHO05D006141 4.4e-48 194.9 105 82.9
Haze_14625 Corylus avellana HOM05D005035 ORTHO05D006141 5.8e-48 194.5 155 66.5
Cre03.g193950 Chlamydomonas reinhardtii HOM05D005035 ORTHO05D006141 1.3e-47 193.4 149 63.8
AUR62022118 Chenopodium quinoa HOM05D005035 ORTHO05D006141 1.7e-47 193.0 104 80.8
AUR62001211 Chenopodium quinoa HOM05D005035 ORTHO05D006141 4.9e-47 191.4 104 79.8
CSS0001095 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.1e-46 190.3 153 64.7
PRCOL_00001533 Prasinoderma coloniale HOM05D005035 ORTHO05D006141 1.9e-46 189.5 122 69.7
CSS0000898 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.7e-45 185.7 157 62.4
arahy.Tifrunner.gnm1.ann1.JZED56 Arachis hypogaea HOM05D005035 ORTHO05D006141 4.6e-45 184.9 150 63.3
Gorai.006G028000 Gossypium raimondii HOM05D005035 ORTHO05D006141 8.7e-44 180.6 100 82.0
CBR_g4436 Chara braunii HOM05D005035 ORTHO05D006141 3.6e-42 175.3 91 81.3
arahy.Tifrunner.gnm1.ann1.IKM8ZR Arachis hypogaea HOM05D005035 ORTHO05D006141 4.5e-40 168.3 109 74.3
SEGI_15320 Sequoiadendron giganteum HOM05D005035 ORTHO05D006141 9.9e-40 167.2 116 72.4
CARHR102650 Cardamine hirsuta HOM05D005035 ORTHO05D006141 1.7e-39 166.4 108 71.3
AUR62032082 Chenopodium quinoa HOM05D005035 ORTHO05D006141 1.2e-37 160.2 112 68.8
Atru.chr8.2413 Acer truncatum HOM05D005035 ORTHO05D006141 1.5e-35 153.3 150 54.7
QL02p078168 Quercus lobata HOM05D005035 ORTHO05D006141 5.6e-35 151.4 78 82.1
Nn3g17009 Nelumbo nucifera HOM05D005035 ORTHO05D006141 7.1e-30 134.4 100 69.0
Oeu031509.1 Olea europaea HOM05D005035 ORTHO05D006141 4.6e-29 131.7 309 31.4
Gohir.D09G023800 Gossypium hirsutum HOM05D005035 ORTHO05D006141 1.9e-27 126.3 75 78.7
AUR62026990 Chenopodium quinoa HOM05D005035 ORTHO05D006141 5.6e-27 124.8 104 58.7
Rhsim08G0061500 Rhododendron simsii HOM05D005035 ORTHO05D006141 6.2e-26 121.3 149 47.0
C04p46660 Brassica napus HOM05D005035 ORTHO05D006141 1.3e-23 113.6 61 77.0
BcaB02g11482 Brassica carinata HOM05D005035 ORTHO05D006141 2.5e-19 99.4 82 54.9
vmacro18227 Vaccinium macrocarpon HOM05D005035 ORTHO05D006141 4.3e-19 98.6 75 69.3
BcaC04g21225 Brassica carinata HOM05D005035 ORTHO05D006141 7.4e-19 97.8 109 50.5
QL02p078176 Quercus lobata HOM05D005035 ORTHO05D006141 3.8e-15 85.5 65 64.6
CSS0035672 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 2.7e-13 79.3 52 63.5
Nn1g06334 Nelumbo nucifera HOM05D005035 ORTHO05D006141 1.7e-10 70.1 43 76.7
CSS0020716 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.1e-09 67.4 40 65.0
CSS0048463 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 1.2e-08 63.9 49 59.2
CARHR102660 Cardamine hirsuta HOM05D005035 ORTHO05D006141 2.0e-08 63.2 42 66.7
Dinv33674 Davidia involucrata HOM05D005035 ORTHO05D006141 2.0e-08 63.2 44 68.2
CSS0011814 Camellia sinensis var. sinensis HOM05D005035 ORTHO05D006141 5.5e-06 55.1 30 70.0


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