Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc07_g00220 Coffea canephora HOM05D006844 ORTHO05D008504 1.2e-309 1066.2 773 100.0
Cfa007302 Carpinus fangiana HOM05D006844 ORTHO05D008504 1.8e-153 547.4 770 58.3
MSTRG.24057 Avicennia marina HOM05D006844 ORTHO05D008504 2.1e-149 533.9 781 67.7
Haze_14791 Corylus avellana HOM05D006844 ORTHO05D008504 4.3e-147 526.2 774 57.4
PGSC0003DMG400012620 Solanum tuberosum HOM05D006844 ORTHO05D008504 9.7e-147 525.0 764 68.8
Dinv33400 Davidia involucrata HOM05D006844 ORTHO05D008504 1.3e-146 524.6 461 59.4
CAN.G473.42 Capsicum annuum HOM05D006844 ORTHO05D008504 2.2e-146 523.9 769 62.4
Nitab4.5_0001031g0200 Nicotiana tabacum HOM05D006844 ORTHO05D008504 8.2e-146 521.9 763 67.4
Sopen02g038250 Solanum pennellii HOM05D006844 ORTHO05D008504 1.1e-142 511.5 766 68.7
TWI12G0359 Tripterygium wilfordii HOM05D006844 ORTHO05D008504 1.9e-142 510.8 767 57.0
Manes.17G108800 Manihot esculenta HOM05D006844 ORTHO05D008504 3.2e-142 510.0 762 65.1
CSS0042583 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 6.1e-141 505.8 549 58.5
CiPaw.03G048400 Carya illinoinensis HOM05D006844 ORTHO05D008504 1.0e-140 505.0 782 65.7
Peaxi162Scf00420g00214 Petunia axillaris HOM05D006844 ORTHO05D008504 2.3e-140 503.8 677 72.2
Migut.H00039 Erythranthe guttata HOM05D006844 ORTHO05D008504 3.0e-140 503.4 767 67.3
CSS0048025 Camellia sinensis var. sinensis HOM05D006844 ORTHO05D008504 5.1e-140 502.7 549 58.1
Prupe.2G095300 Prunus persica HOM05D006844 ORTHO05D008504 1.1e-139 501.5 549 49.4
SalBow1G4663 Salvia bowleyana HOM05D006844 ORTHO05D008504 5.7e-139 499.2 683 70.7
Nitab4.5_0000935g0090 Nicotiana tabacum HOM05D006844 ORTHO05D008504 1.4e-137 494.6 771 61.0
SGA_v2.0_scaffold135G34928 Striga asiatica HOM05D006844 ORTHO05D008504 2.6e-136 490.3 777 57.0
TAR622G0321 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.7e-135 487.6 783 62.8
Rhsim10G0012800 Rhododendron simsii HOM05D006844 ORTHO05D008504 5.0e-135 486.1 776 66.5
Nn4g22496 Nelumbo nucifera HOM05D006844 ORTHO05D008504 1.9e-134 484.2 775 66.1
Hma1.2p1_1484F.1_g286470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.5e-134 483.8 779 45.7
Hma1.2p1_1484F.1_g286476 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.5e-134 483.8 779 45.7
Thecc.04G024500 Theobroma cacao HOM05D006844 ORTHO05D008504 9.4e-134 481.9 768 63.9
Hma1.2p1_1484F.1_g286480 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.2e-133 481.5 792 59.1
Ciclev10014357m.g Citrus clementina HOM05D006844 ORTHO05D008504 3.6e-133 479.9 779 65.6
Potri.017G070800 Populus trichocarpa HOM05D006844 ORTHO05D008504 1.4e-132 478.0 773 65.1
MD09G1019500 Malus domestica HOM05D006844 ORTHO05D008504 1.8e-132 477.6 542 56.3
vmacro05904 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 3.9e-132 476.5 783 63.9
QL02p073443 Quercus lobata HOM05D006844 ORTHO05D008504 6.7e-132 475.7 543 57.1
Sabra17G0063000 Salix brachista HOM05D006844 ORTHO05D008504 1.1e-131 474.9 772 63.3
Sabra06G0144800 Salix brachista HOM05D006844 ORTHO05D008504 2.0e-131 474.2 772 63.3
Gohir.D04G080600 Gossypium hirsutum HOM05D006844 ORTHO05D008504 9.7e-131 471.9 769 65.0
TAR374G0379 Trochodendron aralioides HOM05D006844 ORTHO05D008504 1.3e-130 471.5 465 63.0
Hma1.2p1_0818F.1_g223470 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 2.2e-130 470.7 364 74.7
Duzib147G1239 Durio zibethinus HOM05D006844 ORTHO05D008504 6.3e-130 469.2 769 63.6
Eucgr.J02268 Eucalyptus grandis HOM05D006844 ORTHO05D008504 6.3e-130 469.2 523 57.6
Gorai.012G091600 Gossypium raimondii HOM05D006844 ORTHO05D008504 6.3e-130 469.2 769 65.0
MD17G1020100 Malus domestica HOM05D006844 ORTHO05D008504 5.3e-129 466.1 543 56.0
Atru.chr6.2466 Acer truncatum HOM05D006844 ORTHO05D008504 7.0e-129 465.7 772 63.0
vmacro05902 Vaccinium macrocarpon HOM05D006844 ORTHO05D008504 2.6e-128 463.8 458 62.9
RcHm_v2.0_Chr1g0336521 Rosa chinensis HOM05D006844 ORTHO05D008504 8.5e-127 458.8 536 56.5
Sc07g0004300 Simmondsia chinensis HOM05D006844 ORTHO05D008504 1.4e-126 458.0 783 58.1
AUR62035998 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.9e-126 457.6 555 54.2
PSO017G3485 Papaver somniferum HOM05D006844 ORTHO05D008504 4.2e-126 456.4 693 64.8
ClCG05G013040 Citrullus lanatus HOM05D006844 ORTHO05D008504 1.2e-125 454.9 507 59.4
PSO478G2097 Papaver somniferum HOM05D006844 ORTHO05D008504 3.6e-125 453.4 693 64.8
PGR083G0468 Punica granatum HOM05D006844 ORTHO05D008504 6.1e-125 452.6 390 69.0
DCAR_011279 Daucus carota HOM05D006844 ORTHO05D008504 8.0e-125 452.2 616 74.8
Solyc02g093620.2 Solanum lycopersicum HOM05D006844 ORTHO05D008504 1.0e-124 451.8 548 82.8
HanXRQChr07g0199131 Helianthus annuus HOM05D006844 ORTHO05D008504 5.2e-124 449.5 417 66.9
MBI13_g29568_MAGBIO Magnolia biondii HOM05D006844 ORTHO05D008504 6.7e-124 449.1 537 55.9
CANSAT64G2991 Cannabis sativa HOM05D006844 ORTHO05D008504 7.4e-123 445.7 535 54.8
ECA238G2031 Erigeron canadensis HOM05D004726 ORTHO05D005986 1.7e-122 444.5 367 71.1
Aqoxy3G01340 Aquilegia oxysepala HOM05D006844 ORTHO05D008504 1.1e-121 441.8 773 60.9
Actinidia36147 Actinidia chinensis HOM05D006844 ORTHO05D008504 2.4e-121 440.7 677 67.9
Sed0025706 Sechium edule HOM05D006844 ORTHO05D008504 3.1e-121 440.3 352 73.0
Lj7P604T32 Lonicera japonica HOM05D006844 ORTHO05D008504 4.1e-121 439.9 533 82.2
Lj1g0000789 Lotus japonicus HOM05D006844 ORTHO05D008504 4.1e-121 439.9 637 68.8
arahy.Tifrunner.gnm1.ann1.QHJM8I Arachis hypogaea HOM05D006844 ORTHO05D008504 7.0e-121 439.1 778 60.5
Ah.10g033120 Amaranthus hybridus HOM05D001127 ORTHO05D002230 1.2e-120 438.3 550 54.5
MELO3C014826.2 Cucumis melo HOM05D006844 ORTHO05D008504 3.5e-120 436.8 365 71.0
COL.COLO4_29236 Corchorus olitorius HOM05D006844 ORTHO05D008504 1.0e-119 435.3 777 61.9
Sp6g29690 Schrenkiella parvula HOM05D006844 ORTHO05D008504 1.7e-119 434.5 534 53.7
CARHR198970 Cardamine hirsuta HOM05D006844 ORTHO05D008504 2.9e-119 433.7 534 53.6
FvH4_7g06820 Fragaria vesca HOM05D006844 ORTHO05D008504 2.9e-119 433.7 532 50.6
FAN01G2612 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.9e-118 431.0 373 66.5
Thhalv10015672m.g Eutrema salsugineum HOM05D006844 ORTHO05D008504 4.2e-118 429.9 529 54.4
THA.LOC104821106 Tarenaya hassleriana HOM05D006844 ORTHO05D008504 4.2e-118 429.9 470 58.7
FAN03G0177 Fragaria x ananassa HOM05D006844 ORTHO05D008504 1.6e-117 427.9 352 71.3
AUR62041622 Chenopodium quinoa HOM05D006844 ORTHO05D008504 2.1e-117 427.6 554 52.7
Aa31LG11G15140 Aethionema arabicum HOM05D006844 ORTHO05D008504 1.8e-116 424.5 529 53.3
Hund11892 Selenicereus undatus HOM05D006844 ORTHO05D008504 3.0e-116 423.7 544 53.7
CsaV3_3G027490 Cucumis sativus L. HOM05D006844 ORTHO05D008504 1.2e-115 421.8 337 74.2
FAN10G3353 Fragaria x ananassa HOM05D006844 ORTHO05D008504 2.6e-115 420.6 352 70.2
Carub.0005s1288 Capsella rubella HOM05D006844 ORTHO05D008504 7.5e-115 419.1 532 53.2
Glyma.16G066300 Glycine max HOM05D006844 ORTHO05D008504 3.7e-114 416.8 817 58.0
Ca_03833_v3 Cicer arietinum L. HOM05D006844 ORTHO05D008504 1.8e-113 414.5 450 57.8
Lsat_1_v5_gn_2_93460 Lactuca sativa HOM05D006844 ORTHO05D008504 5.3e-113 412.9 329 73.9
Lalb_Chr14g0362981 Lupinus albus HOM05D006844 ORTHO05D008504 1.6e-112 411.4 547 50.5
AL6G25060 Arabidopsis lyrata HOM05D006844 ORTHO05D008504 2.7e-112 410.6 527 48.8
Phvul.008G145600 Phaseolus vulgaris HOM05D006844 ORTHO05D008504 1.7e-111 407.9 542 50.4
BcaB01g06378 Brassica carinata HOM05D006844 ORTHO05D008504 3.8e-111 406.8 379 67.0
AT3G46610 Arabidopsis thaliana HOM05D006844 ORTHO05D008504 5.0e-111 406.4 379 59.4
VMungo1080G0705 Vigna mungo HOM05D006844 ORTHO05D008504 6.5e-111 406.0 772 59.7
Gohir.A05G342700 Gossypium hirsutum HOM05D006844 ORTHO05D008504 8.5e-111 405.6 556 77.7
Glyma.19G080500 Glycine max HOM05D006844 ORTHO05D008504 4.1e-105 386.7 592 70.8
Psat3g169440 Pisum sativum HOM05D006844 ORTHO05D008504 9.1e-105 385.6 366 62.8
HPP92_010824 Vanilla planifolia HOM05D006844 ORTHO05D008504 3.5e-104 383.6 411 56.4
ATR0824G256 Amborella trichopoda HOM05D006844 ORTHO05D008504 1.3e-103 381.7 449 54.8
BcaB01g05117 Brassica carinata HOM05D006844 ORTHO05D008504 2.3e-103 380.9 367 65.7
C03p07580 Brassica napus HOM05D006844 ORTHO05D008504 2.3e-103 380.9 367 65.7
TPR.G1077 Trifolium pratense HOM05D006844 ORTHO05D008504 8.6e-103 379.0 356 62.6
BraA03t09988Z Brassica rapa HOM05D006844 ORTHO05D008504 1.9e-102 377.9 371 65.0
A03p06560 Brassica napus HOM05D006844 ORTHO05D008504 2.1e-101 374.4 371 64.7
BolC3t13259H Brassica oleracea HOM05D006844 ORTHO05D008504 4.7e-101 373.2 367 65.1
CDE02G4692 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 8.9e-100 369.0 452 56.4
CDE09G1288 Ceratophyllum demersum HOM05D006844 ORTHO05D008504 1.5e-99 368.2 455 56.0
Os12g0283900 Oryza sativa ssp. japonica HOM05D006844 ORTHO05D008504 4.9e-98 363.2 373 60.3
Oeu023834.1 Olea europaea HOM05D006844 ORTHO05D008504 4.6e-80 303.5 524 47.1
BcaB01g06331 Brassica carinata HOM05D006844 ORTHO05D008504 9.2e-73 279.3 367 44.7
Zm00001eb273000 Zea mays HOM05D006844 ORTHO05D008504 5.1e-71 273.5 200 63.5
Hma1.2p1_0818F.1_g223460 Hydrangea macrophylla HOM05D006844 ORTHO05D008504 1.7e-63 248.4 216 57.9
GSVIVG01003980001 Vitis vinifera HOM05D006844 ORTHO05D008504 1.3e-58 232.3 543 34.3
AagrBONN_evm.TU.Sc2ySwM_117.3382 Anthoceros agrestis HOM05D006844 ORTHO05D008504 9.6e-46 189.5 377 42.2
Pp3c26_10760 Physcomitrium patens HOM05D006844 ORTHO05D008504 1.2e-43 182.6 364 35.7
Mapoly0038s0061 Marchantia polymorpha HOM05D006844 ORTHO05D008504 3.1e-36 157.9 383 38.6
EL10Ac2g03526 Beta vulgaris HOM05D006844 ORTHO05D008504 1.8e-28 132.1 217 54.8
SMO367G0130 Selaginella moellendorffii HOM05D006844 ORTHO05D008504 3.0e-23 114.8 145 40.0
BcaB01g05118 Brassica carinata HOM05D006844 ORTHO05D008504 2.0e-22 112.1 141 44.7
AUR62025550 Chenopodium quinoa HOM05D006844 ORTHO05D008504 1.1e-20 106.3 60 78.3
SalBow1G4926 Salvia bowleyana HOM05D006844 ORTHO05D008504 2.6e-14 85.1 59 64.4


User provided reference genes

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