Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g22820 Coffea canephora HOM05D006173 ORTHO05D007685 2.4e-278 961.4 467 100.0
Actinidia17973 Actinidia chinensis HOM05D006173 ORTHO05D007685 4.6e-192 674.9 470 70.2
Oeu060754.2 Olea europaea HOM05D006173 ORTHO05D007685 4.4e-187 658.3 495 66.9
Hma1.2p1_0044F.1_g026020 Hydrangea macrophylla HOM05D006173 ORTHO05D007685 5.8e-187 657.9 477 66.5
Ciclev10011725m.g Citrus clementina HOM05D006173 ORTHO05D007685 2.1e-184 649.4 468 67.1
Dinv10196 Davidia involucrata HOM05D006173 ORTHO05D007685 5.1e-183 644.8 468 68.4
PGSC0003DMG400017881 Solanum tuberosum HOM05D006173 ORTHO05D007685 2.5e-182 642.5 464 68.5
Cpa.g.sc33.197 Carica papaya HOM05D006173 ORTHO05D007685 9.5e-182 640.6 468 66.0
Migut.K00169 Erythranthe guttata HOM05D006173 ORTHO05D007685 1.6e-181 639.8 459 69.3
Prupe.7G021600 Prunus persica HOM05D006173 ORTHO05D007685 6.2e-181 637.9 471 67.5
Potri.016G030400 Populus trichocarpa HOM05D006173 ORTHO05D007685 1.1e-180 637.1 472 66.1
Sopen08g011280 Solanum pennellii HOM05D006173 ORTHO05D007685 2.0e-179 632.9 464 67.9
Solyc08g016801.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 5.8e-179 631.3 464 67.5
Gorai.007G351000 Gossypium raimondii HOM05D006173 ORTHO05D007685 7.5e-179 630.9 463 67.6
Gohir.D11G320800 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.3e-178 630.2 463 67.4
Thecc.05G131000 Theobroma cacao HOM05D006173 ORTHO05D007685 2.9e-178 629.0 463 66.5
Manes.10G077600 Manihot esculenta HOM05D006173 ORTHO05D007685 6.4e-178 627.9 470 66.8
MSTRG.10773 Avicennia marina HOM05D006173 ORTHO05D007685 1.1e-177 627.1 459 66.4
Gohir.A11G305400 Gossypium hirsutum HOM05D006173 ORTHO05D007685 1.1e-177 627.1 463 67.2
Peaxi162Scf00937g00117 Petunia axillaris HOM05D006173 ORTHO05D007685 1.6e-176 623.2 443 69.3
Cfa019941 Carpinus fangiana HOM05D006173 ORTHO05D007685 3.5e-176 622.1 475 65.5
Atru.chr1.1516 Acer truncatum HOM05D006173 ORTHO05D007685 4.6e-176 621.7 473 65.5
Haze_20298 Corylus avellana HOM05D006173 ORTHO05D007685 1.0e-175 620.5 482 64.5
TWI74G0774 Tripterygium wilfordii HOM05D006173 ORTHO05D007685 1.3e-175 620.2 475 64.8
ClCG10G016510 Citrullus lanatus HOM05D006173 ORTHO05D007685 3.9e-175 618.6 493 63.7
Sabra16G0033900 Salix brachista HOM05D006173 ORTHO05D007685 3.9e-175 618.6 498 63.5
Duzib106G1718 Durio zibethinus HOM05D006173 ORTHO05D007685 1.8e-172 609.8 461 65.7
CiPaw.10G124100 Carya illinoinensis HOM05D006173 ORTHO05D007685 6.8e-172 607.8 475 64.6
EL10Ac3g07343 Beta vulgaris HOM05D006173 ORTHO05D007685 4.4e-171 605.1 469 62.9
Lj1g0020171 Lotus japonicus HOM05D006173 ORTHO05D007685 9.9e-171 604.0 473 64.1
Thhalv10005968m.g Eutrema salsugineum HOM05D006173 ORTHO05D007685 4.2e-169 598.6 470 63.2
FAN10G0117 Fragaria x ananassa HOM05D006173 ORTHO05D007685 4.2e-169 598.6 474 63.3
Medtr7g088540 Medicago truncatula HOM05D006173 ORTHO05D007685 9.3e-169 597.4 476 62.2
BcaC07g40109 Brassica carinata HOM05D006173 ORTHO05D007685 2.7e-168 595.9 468 62.4
MD12G1112000 Malus domestica HOM05D006173 ORTHO05D007685 1.0e-167 594.0 540 57.6
PSO541G4485 Papaver somniferum HOM05D006173 ORTHO05D007685 1.0e-167 594.0 466 62.7
PGR142G0634 Punica granatum HOM05D006173 ORTHO05D007685 1.3e-167 593.6 477 62.7
A09p49770 Brassica napus HOM05D006173 ORTHO05D007685 1.7e-167 593.2 464 62.3
BraA09t40430Z Brassica rapa HOM05D006173 ORTHO05D007685 1.7e-167 593.2 464 62.3
C08p32150 Brassica napus HOM05D006173 ORTHO05D007685 5.1e-167 591.7 464 62.5
BolC8t50833H Brassica oleracea HOM05D006173 ORTHO05D007685 1.1e-166 590.5 464 62.3
FvH4_7g04320 Fragaria vesca HOM05D006173 ORTHO05D007685 1.1e-166 590.5 465 63.7
arahy.Tifrunner.gnm1.ann1.NS6SL1 Arachis hypogaea HOM05D006173 ORTHO05D007685 1.9e-166 589.7 486 61.7
Aa31LG10G11760 Aethionema arabicum HOM05D006173 ORTHO05D007685 4.3e-166 588.6 525 57.3
PSO675G1003 Papaver somniferum HOM05D006173 ORTHO05D007685 4.3e-166 588.6 466 63.1
Glyma.19G125000 Glycine max HOM05D006173 ORTHO05D007685 1.6e-165 586.6 472 62.3
THA.LOC104814894 Tarenaya hassleriana HOM05D006173 ORTHO05D007685 1.6e-165 586.6 469 61.2
CsaV3_3G039830 Cucumis sativus L. HOM05D006173 ORTHO05D007685 2.1e-165 586.3 473 62.6
ECA247G0085 Erigeron canadensis HOM05D006173 ORTHO05D007685 2.8e-165 585.9 464 62.7
Glyma.03G120400 Glycine max HOM05D006173 ORTHO05D007685 2.8e-165 585.9 471 61.6
FAN01G1644 Fragaria x ananassa HOM05D006173 ORTHO05D007685 1.8e-164 583.2 547 56.9
Phvul.001G116600 Phaseolus vulgaris HOM05D006173 ORTHO05D007685 9.0e-164 580.9 473 61.1
Sed0007984 Sechium edule HOM05D006173 ORTHO05D007685 9.0e-164 580.9 475 62.5
MELO3C009724.2 Cucumis melo HOM05D006173 ORTHO05D007685 7.6e-163 577.8 473 61.9
AT3G56900 Arabidopsis thaliana HOM05D006173 ORTHO05D007685 3.8e-162 575.5 470 61.9
arahy.Tifrunner.gnm1.ann1.TSE1DU Arachis hypogaea HOM05D006173 ORTHO05D007685 3.8e-162 575.5 497 59.8
BcaC07g40002 Brassica carinata HOM05D006173 ORTHO05D007685 6.4e-162 574.7 464 61.0
Carub.0005s2364 Capsella rubella HOM05D006173 ORTHO05D007685 6.4e-162 574.7 473 61.7
CARHR167050 Cardamine hirsuta HOM05D006173 ORTHO05D007685 1.4e-161 573.5 473 61.7
VMungo0331G1996 Vigna mungo HOM05D006173 ORTHO05D007685 1.4e-161 573.5 471 60.1
AL5G38300 Arabidopsis lyrata HOM05D006173 ORTHO05D007685 2.4e-161 572.8 470 61.5
Zm00001eb405260 Zea mays HOM05D006173 ORTHO05D007685 1.6e-160 570.1 464 58.2
CSS0033436 Camellia sinensis var. sinensis HOM05D006173 ORTHO05D007685 4.6e-160 568.5 449 64.4
Lsat_1_v5_gn_9_32341 Lactuca sativa HOM05D006173 ORTHO05D007685 7.8e-160 567.8 463 60.3
Eucgr.K01689 Eucalyptus grandis HOM05D006173 ORTHO05D007685 3.0e-159 565.8 479 58.2
Sp5g05690 Schrenkiella parvula HOM05D006173 ORTHO05D007685 3.0e-159 565.8 472 61.0
Os12g0129400 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 9.6e-158 560.8 464 57.1
Os11g0132700 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 3.6e-157 558.9 464 56.2
HanXRQChr14g0457301 Helianthus annuus HOM05D006173 ORTHO05D007685 1.1e-156 557.4 461 60.1
FAN06G1001 Fragaria x ananassa HOM05D006173 ORTHO05D007685 4.5e-155 552.0 465 60.9
AUR62020996 Chenopodium quinoa HOM05D006173 ORTHO05D007685 8.4e-154 547.7 445 61.8
vmacro07758 Vaccinium macrocarpon HOM05D006173 ORTHO05D007685 3.5e-152 542.3 487 58.9
TPR.G27968 Trifolium pratense HOM05D006173 ORTHO05D007685 1.3e-151 540.4 435 63.0
SalBow1G0987 Salvia bowleyana HOM05D006173 ORTHO05D007685 6.9e-148 528.1 490 57.6
Hund19061 Selenicereus undatus HOM05D006173 ORTHO05D007685 6.5e-146 521.5 445 59.3
TAR623G0939 Trochodendron aralioides HOM05D006173 ORTHO05D007685 1.4e-145 520.4 432 62.0
SEGI_22413 Sequoiadendron giganteum HOM05D006173 ORTHO05D007685 3.2e-145 519.2 487 54.8
CDE02G3082 Ceratophyllum demersum HOM05D006173 ORTHO05D007685 4.3e-142 508.8 464 55.4
Sc19g0007880 Simmondsia chinensis HOM05D006173 ORTHO05D007685 2.0e-139 500.0 420 59.8
Aqoxy3G01734 Aquilegia oxysepala HOM05D006173 ORTHO05D007685 3.8e-138 495.7 355 65.6
SGA_v2.0_scaffold106G30556 Striga asiatica HOM05D006173 ORTHO05D007685 3.8e-138 495.7 478 55.4
AUR62018437 Chenopodium quinoa HOM05D006173 ORTHO05D007685 2.2e-130 469.9 426 56.6
Mapoly0010s0124 Marchantia polymorpha HOM05D006173 ORTHO05D007685 3.0e-119 433.0 497 44.5
RhsimUnG0020600 Rhododendron simsii HOM05D006173 ORTHO05D007685 4.8e-117 425.6 434 53.9
Psat3g082320 Pisum sativum HOM05D006173 ORTHO05D007685 7.0e-116 421.8 376 58.8
SMO116G0186 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 1.5e-110 404.1 483 42.9
SMO133G0039 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 2.0e-110 403.7 483 42.9
MBI19_g25019_MAGBIO Magnolia biondii HOM05D006173 ORTHO05D007685 5.7e-110 402.1 412 53.4
Nitab4.5_0003840g0020 Nicotiana tabacum HOM05D006173 ORTHO05D007685 3.8e-106 389.4 304 64.1
GSVIVG01025850001 Vitis vinifera HOM05D006173 ORTHO05D007685 1.5e-105 387.5 210 82.9
Nitab4.5_0000211g0120 Nicotiana tabacum HOM05D006173 ORTHO05D007685 3.2e-105 386.3 264 70.5
Solyc08g016808.1 Solanum lycopersicum HOM05D006173 ORTHO05D007685 4.2e-105 386.0 350 56.0
Pp3c11_18220 Physcomitrium patens HOM05D006173 ORTHO05D007685 1.0e-103 381.3 478 41.0
MD14G1101100 Malus domestica HOM05D006173 ORTHO05D007685 4.1e-100 369.4 217 77.0
RcHm_v2.0_Chr1g0329271 Rosa chinensis HOM05D006173 ORTHO05D007685 8.0e-96 355.1 201 80.1
Ca_08352_v3 Cicer arietinum L. HOM05D006173 ORTHO05D007685 5.2e-95 352.4 322 56.5
Lalb_Chr22g0358001 Lupinus albus HOM05D006173 ORTHO05D007685 3.4e-94 349.7 201 77.6
VMungo1383G1641 Vigna mungo HOM05D006173 ORTHO05D007685 2.4e-92 343.6 443 46.5
ATR0307G134 Amborella trichopoda HOM05D006173 ORTHO05D007685 2.9e-90 336.7 200 74.0
QL07p014498 Quercus lobata HOM05D006173 ORTHO05D007685 3.8e-90 336.3 187 80.7
SMO069G0001 Selaginella moellendorffii HOM05D006173 ORTHO05D007685 3.2e-76 290.0 251 52.2
Lj1A24G67 Lonicera japonica HOM05D006173 ORTHO05D007685 5.0e-74 282.7 260 59.2
HPP92_002170 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.9e-73 280.8 168 73.8
Lj1A24G66 Lonicera japonica HOM05D006173 ORTHO05D007685 3.6e-72 276.6 151 84.8
Solyc08g036600.3 Solanum lycopersicum HOM05D006173 ORTHO05D007685 2.0e-70 270.8 201 69.7
RcHm_v2.0_Chr1g0329281 Rosa chinensis HOM05D006173 ORTHO05D007685 3.4e-70 270.0 223 60.5
unitig_46.g18486 Utricularia gibba HOM05D006173 ORTHO05D007685 4.4e-70 269.6 201 63.2
FAN03G1994 Fragaria x ananassa HOM05D006173 ORTHO05D007685 4.1e-68 263.1 232 59.5
MD14G1101000 Malus domestica HOM05D006173 ORTHO05D007685 5.6e-65 252.7 287 49.8
Lalb_Chr22g0357991 Lupinus albus HOM05D006173 ORTHO05D007685 1.1e-63 248.4 235 56.6
CANSAT64G0701 Cannabis sativa HOM05D006173 ORTHO05D007685 2.2e-61 240.7 138 79.0
ATR0307G100 Amborella trichopoda HOM05D006173 ORTHO05D007685 1.0e-58 231.9 231 48.9
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 5.6e-57 226.1 214 55.1
DCAR_020632 Daucus carota HOM05D002466 ORTHO05D002668 2.8e-56 223.8 188 58.5
CBR_g54315 Chara braunii HOM05D006173 ORTHO05D007685 1.5e-54 218.0 359 35.9
QL07p014493 Quercus lobata HOM05D006173 ORTHO05D007685 9.6e-49 198.7 164 59.1
GSVIVG01025851001 Vitis vinifera HOM05D006173 ORTHO05D007685 1.3e-45 188.3 180 53.3
TAR623G0990 Trochodendron aralioides HOM05D006173 ORTHO05D007685 1.3e-40 171.8 108 77.8
Lj2A730T36 Lonicera japonica HOM05D006173 ORTHO05D007685 1.1e-39 168.7 243 41.2
Nitab4.5_0000275g0010 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.2e-37 161.0 87 80.5
SGA_v2.0_scaffold106G30559 Striga asiatica HOM05D000268 ORTHO05D000261 2.9e-37 160.6 291 37.5
PRCOL_00002577 Prasinoderma coloniale HOM05D006173 ORTHO05D007685 9.6e-33 145.6 296 28.7
Nitab4.5_0000211g0140 Nicotiana tabacum HOM05D006173 ORTHO05D007685 6.2e-32 142.9 87 75.9
Nitab4.5_0003840g0030 Nicotiana tabacum HOM05D006173 ORTHO05D007685 2.7e-27 127.5 70 80.0
MCO12G281 Micromonas commoda HOM05D006173 ORTHO05D007685 4.3e-17 93.6 248 27.0
Lj2A730T35 Lonicera japonica HOM05D006173 ORTHO05D007685 5.3e-15 86.7 57 73.7
Lsat_1_v5_gn_4_93961 Lactuca sativa HOM05D006173 ORTHO05D007685 1.2e-14 85.5 52 73.1
Os12g0131300 Oryza sativa ssp. japonica HOM05D006173 ORTHO05D007685 3.6e-11 73.9 62 51.6


User provided reference genes

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