Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g16120 Coffea canephora HOM05D006341 ORTHO05D000377 1.7e-301 1038.5 507 100.0
Dinv04950 Davidia involucrata HOM05D006341 ORTHO05D000377 4.5e-209 731.5 500 72.2
Oeu006673.1 Olea europaea HOM05D006341 ORTHO05D000377 6.0e-206 721.1 512 70.5
CSS0004411 Camellia sinensis var. sinensis HOM05D006341 ORTHO05D000377 1.6e-198 696.4 511 69.1
Hma1.2p1_0032F.1_g019570 Hydrangea macrophylla HOM05D006341 ORTHO05D000377 1.3e-197 693.3 501 68.7
Sopen01g042030 Solanum pennellii HOM05D006341 ORTHO05D000377 6.2e-195 684.5 500 68.2
Solyc01g098460.4 Solanum lycopersicum HOM05D006341 ORTHO05D000377 3.1e-194 682.2 500 67.8
Actinidia00608 Actinidia chinensis HOM05D006341 ORTHO05D000377 1.7e-192 676.4 470 69.6
Duzib132G0346 Durio zibethinus HOM05D006341 ORTHO05D000377 1.1e-191 673.7 499 66.9
CAN.G134.236 Capsicum annuum HOM05D006341 ORTHO05D000377 1.9e-191 672.9 499 67.9
Ciclev10028267m.g Citrus clementina HOM05D006341 ORTHO05D000377 4.2e-191 671.8 493 66.1
Peaxi162Scf00434g00625 Petunia axillaris HOM05D006341 ORTHO05D000377 1.2e-190 670.2 495 67.1
Thecc.02G064100 Theobroma cacao HOM05D006341 ORTHO05D000377 7.9e-190 667.5 504 65.9
TAR381G0106 Trochodendron aralioides HOM05D006341 ORTHO05D000377 3.9e-189 665.2 508 64.6
COL.COLO4_17298 Corchorus olitorius HOM05D006341 ORTHO05D000377 1.5e-188 663.3 498 65.9
Sabra04G0114400 Salix brachista HOM05D006341 ORTHO05D000377 6.3e-187 657.9 500 65.8
Prupe.8G162700 Prunus persica HOM05D006341 ORTHO05D000377 2.4e-186 656.0 493 67.1
Gorai.008G034900 Gossypium raimondii HOM05D006341 ORTHO05D000377 2.0e-185 652.9 497 66.2
Potri.004G172100 Populus trichocarpa HOM05D006341 ORTHO05D000377 2.6e-185 652.5 500 66.4
Gohir.A12G038400 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.0e-184 650.6 497 65.6
Gohir.D12G033900 Gossypium hirsutum HOM05D006341 ORTHO05D000377 1.7e-184 649.8 497 65.8
COL.COLO4_17179 Corchorus olitorius HOM05D006341 ORTHO05D000377 2.9e-184 649.0 471 67.7
CANSAT25G3024 Cannabis sativa HOM05D006341 ORTHO05D000377 3.8e-184 648.7 496 64.9
vmacro02264 Vaccinium macrocarpon HOM05D006341 ORTHO05D000377 3.8e-184 648.7 548 62.0
TWI53G1223 Tripterygium wilfordii HOM05D006341 ORTHO05D000377 4.2e-183 645.2 492 65.0
Manes.11G082657 Manihot esculenta HOM05D006341 ORTHO05D000377 5.5e-183 644.8 500 66.6
Nitab4.5_0001423g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 9.4e-183 644.0 471 67.1
Nn7g37263 Nelumbo nucifera HOM05D006341 ORTHO05D000377 4.6e-182 641.7 502 64.1
Atru.chr5.3271 Acer truncatum HOM05D006341 ORTHO05D000377 5.1e-181 638.3 490 65.3
TPR.G31245 Trifolium pratense HOM05D006341 ORTHO05D000377 5.1e-181 638.3 496 65.5
QL11p049167 Quercus lobata HOM05D006341 ORTHO05D000377 2.5e-180 636.0 481 65.5
FvH4_2g01620 Fragaria vesca HOM05D006341 ORTHO05D000377 5.7e-180 634.8 496 63.7
Haze_02181 Corylus avellana HOM05D006341 ORTHO05D000377 7.4e-180 634.4 475 65.9
MD05G1118100 Malus domestica HOM05D006341 ORTHO05D000377 9.7e-180 634.0 495 64.8
CsaV3_7G000880 Cucumis sativus L. HOM05D006341 ORTHO05D000377 8.2e-179 630.9 493 63.9
Haze_02174 Corylus avellana HOM05D006341 ORTHO05D000377 1.4e-178 630.2 475 65.5
RcHm_v2.0_Chr6g0244411 Rosa chinensis HOM05D006341 ORTHO05D000377 2.4e-178 629.4 492 63.8
RcHm_v2.0_Chr6g0244441 Rosa chinensis HOM05D006341 ORTHO05D000377 5.9e-177 624.8 496 63.7
Migut.B00102 Erythranthe guttata HOM05D006341 ORTHO05D000377 3.2e-175 619.0 495 63.4
MSTRG.16892 Avicennia marina HOM05D006341 ORTHO05D000377 5.5e-175 618.2 507 62.9
PGR042G0052 Punica granatum HOM05D006341 ORTHO05D000377 5.5e-175 618.2 497 62.6
Lj4g0012983 Lotus japonicus HOM05D006341 ORTHO05D000377 1.6e-174 616.7 495 63.0
Nitab4.5_0001903g0070 Nicotiana tabacum HOM05D006341 ORTHO05D000377 1.6e-174 616.7 422 70.1
THA.LOC104807791 Tarenaya hassleriana HOM05D006341 ORTHO05D000377 1.6e-174 616.7 506 62.1
Psat7g085760 Pisum sativum HOM05D006341 ORTHO05D000377 2.1e-174 616.3 495 64.4
Lj5A183G92 Lonicera japonica HOM05D006341 ORTHO05D000377 3.6e-174 615.5 462 67.7
Lsat_1_v5_gn_8_124961 Lactuca sativa HOM05D006341 ORTHO05D000377 6.1e-174 614.8 495 62.2
Aqoxy5G01641 Aquilegia oxysepala HOM05D006341 ORTHO05D000377 2.3e-173 612.8 485 63.3
Rhsim11G0190600 Rhododendron simsii HOM05D006341 ORTHO05D000377 1.5e-172 610.1 508 62.6
Hund06416 Selenicereus undatus HOM05D006341 ORTHO05D000377 5.7e-172 608.2 517 60.9
SGA_v2.0_scaffold58G20406 Striga asiatica HOM05D006341 ORTHO05D000377 4.8e-171 605.1 499 61.7
Sc08g0003080 Simmondsia chinensis HOM05D006341 ORTHO05D000377 8.2e-171 604.4 516 60.7
SalBow1G4312 Salvia bowleyana HOM05D006341 ORTHO05D000377 3.1e-170 602.4 494 61.3
HanXRQChr17g0553851 Helianthus annuus HOM05D006341 ORTHO05D000377 2.0e-169 599.7 504 60.3
Thhalv10000146m.g Eutrema salsugineum HOM05D006341 ORTHO05D000377 3.5e-169 599.0 482 62.7
Ca_18243_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.0e-168 597.4 471 63.9
Atru.chr5.3277 Acer truncatum HOM05D006341 ORTHO05D000377 3.8e-168 595.5 496 62.1
EL10Ac9g21414 Beta vulgaris HOM05D006341 ORTHO05D000377 1.1e-167 594.0 512 59.0
AUR62010072 Chenopodium quinoa HOM05D006341 ORTHO05D000377 1.2e-166 590.5 510 59.4
Sp4g00210 Schrenkiella parvula HOM05D006341 ORTHO05D000377 1.8e-165 586.6 494 60.9
AT2G21070 Arabidopsis thaliana HOM05D006341 ORTHO05D000377 3.9e-165 585.5 499 59.7
FAN20G2467 Fragaria x ananassa HOM05D006341 ORTHO05D000377 5.2e-165 585.1 450 64.0
Eucgr.G01768 Eucalyptus grandis HOM05D006341 ORTHO05D000377 1.1e-164 583.9 501 60.9
Carub.0003s3491 Capsella rubella HOM05D006341 ORTHO05D000377 1.5e-164 583.6 494 60.3
Sed0009186 Sechium edule HOM05D006341 ORTHO05D000377 3.3e-164 582.4 455 62.9
Dinv39489 Davidia involucrata HOM05D006341 ORTHO05D000377 4.4e-164 582.0 498 61.2
FAN24G0408 Fragaria x ananassa HOM05D006341 ORTHO05D000377 4.4e-164 582.0 450 63.6
ECA233G1460 Erigeron canadensis HOM05D006341 ORTHO05D000377 5.7e-164 581.6 469 62.3
AL4G10160 Arabidopsis lyrata HOM05D006341 ORTHO05D000377 1.3e-163 580.5 495 59.6
GSVIVG01024058001 Vitis vinifera HOM05D006341 ORTHO05D000377 2.8e-163 579.3 499 60.5
arahy.Tifrunner.gnm1.ann1.UN7M5W Arachis hypogaea HOM05D006341 ORTHO05D000377 1.1e-162 577.4 506 59.5
CARHR111910 Cardamine hirsuta HOM05D006341 ORTHO05D000377 1.1e-162 577.4 493 59.4
MELO3C013369.2 Cucumis melo HOM05D006341 ORTHO05D000377 3.1e-162 575.9 454 62.8
Glyma.08G087700 Glycine max HOM05D006341 ORTHO05D000377 7.0e-162 574.7 495 60.6
arahy.Tifrunner.gnm1.ann1.MR7L4V Arachis hypogaea HOM05D006341 ORTHO05D000377 5.9e-161 571.6 496 59.7
Aa31LG7G15600 Aethionema arabicum HOM05D006341 ORTHO05D000377 1.0e-160 570.9 469 60.1
Lalb_Chr13g0293551 Lupinus albus HOM05D006341 ORTHO05D000377 1.3e-160 570.5 517 56.5
BraA04t17219Z Brassica rapa HOM05D006341 ORTHO05D000377 1.7e-160 570.1 494 59.5
BcaB06g27766 Brassica carinata HOM05D006341 ORTHO05D000377 2.2e-160 569.7 494 59.9
unitig_60.g25823 Utricularia gibba HOM05D006341 ORTHO05D000377 3.8e-160 568.9 496 58.1
A04p15870 Brassica napus HOM05D006341 ORTHO05D000377 5.5e-159 565.1 494 59.1
C04p50300 Brassica napus HOM05D006341 ORTHO05D000377 9.4e-159 564.3 494 58.7
BolC4t26628H Brassica oleracea HOM05D006341 ORTHO05D000377 9.4e-159 564.3 494 58.7
MBI02_g27965_MAGBIO Magnolia biondii HOM05D006341 ORTHO05D000377 1.2e-158 563.9 499 60.5
ClCG02G004230 Citrullus lanatus HOM05D006341 ORTHO05D000377 1.1e-154 550.8 514 58.2
Glyma.05G133200 Glycine max HOM05D006341 ORTHO05D000377 1.1e-154 550.8 497 58.4
CDE05G1540 Ceratophyllum demersum HOM05D006341 ORTHO05D000377 3.1e-154 549.3 520 55.6
Os02g0121200 Oryza sativa ssp. japonica HOM05D006341 ORTHO05D000377 7.7e-153 544.7 487 56.3
ATR0810G159 Amborella trichopoda HOM05D006341 ORTHO05D000377 4.2e-151 538.9 504 54.0
VMungo0251G3227 Vigna mungo HOM05D006341 ORTHO05D000377 2.7e-150 536.2 454 60.6
Ah.01g008830 Amaranthus hybridus HOM05D006341 ORTHO05D000377 2.0e-148 530.0 493 56.4
HPP92_014019 Vanilla planifolia HOM05D006341 ORTHO05D000377 8.3e-147 524.6 492 55.7
SEGI_13829 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.0e-141 506.1 494 53.0
SEGI_22420 Sequoiadendron giganteum HOM05D006341 ORTHO05D000377 3.0e-141 506.1 494 53.0
SHI05717 Sapria himalayana HOM05D006341 ORTHO05D000377 7.5e-140 501.5 509 51.1
QL11p048584 Quercus lobata HOM05D006341 ORTHO05D000377 4.0e-133 479.2 432 57.9
Phvul.002G189600 Phaseolus vulgaris HOM05D006341 ORTHO05D000377 2.0e-132 476.9 492 53.0
Potri.009G131700 Populus trichocarpa HOM05D006341 ORTHO05D000377 4.3e-127 459.1 315 71.1
Cpa.g.sc37.173 Carica papaya HOM05D006341 ORTHO05D000377 2.2e-123 446.8 496 49.2
AagrBONN_evm.TU.Sc2ySwM_228.2682 Anthoceros agrestis HOM05D006341 ORTHO05D000377 1.4e-122 444.1 496 48.4
Pp3c8_21040 Physcomitrium patens HOM05D006341 ORTHO05D000377 2.4e-122 443.4 546 44.5
Mapoly0085s0033 Marchantia polymorpha HOM05D006341 ORTHO05D000377 1.2e-121 441.0 552 46.2
Zm00001eb208320 Zea mays HOM05D006341 ORTHO05D000377 4.7e-118 429.1 413 54.2
Nitab4.5_0008354g0020 Nicotiana tabacum HOM05D006341 ORTHO05D000377 2.6e-116 423.3 321 64.8
CiPaw.06G124100 Carya illinoinensis HOM05D006341 ORTHO05D000377 1.9e-111 407.1 351 59.8
Ca_18241_v3 Cicer arietinum L. HOM05D006341 ORTHO05D000377 1.5e-108 397.5 398 53.5
Atru.chr5.3221 Acer truncatum HOM05D006341 ORTHO05D000377 6.4e-107 392.1 275 70.9
SMO169G0079 Selaginella moellendorffii HOM05D006341 ORTHO05D000377 4.2e-106 389.4 494 45.3
Carub.0004s0010 Capsella rubella HOM05D006341 ORTHO05D000377 1.2e-97 361.3 493 43.6
FAN22G0308 Fragaria x ananassa HOM05D003409 ORTHO05D004015 9.0e-85 318.5 292 57.2
Sabra09G0102100 Salix brachista HOM05D006341 ORTHO05D000377 1.3e-67 261.5 307 48.9
PGSC0003DMG401028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 6.1e-65 252.7 145 82.1
Cre01.g044150 Chlamydomonas reinhardtii HOM05D006341 ORTHO05D000377 1.8e-61 241.1 400 36.0
MCO01G168 Micromonas commoda HOM05D006341 ORTHO05D000377 3.1e-61 240.4 464 33.0
CBR_g23939 Chara braunii HOM05D006341 ORTHO05D000377 5.0e-51 206.5 811 25.2
PGSC0003DMG402028564 Solanum tuberosum HOM05D006341 ORTHO05D000377 3.0e-40 170.6 132 64.4
PRCOL_00006207 Prasinoderma coloniale HOM05D006341 ORTHO05D000377 4.0e-40 170.2 334 32.0
FAN07G1625 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.7e-38 164.9 111 70.3
Actinidia20497 Actinidia chinensis HOM05D006341 ORTHO05D000377 6.6e-27 126.3 74 78.4
Oeu063293.1 Olea europaea HOM05D006341 ORTHO05D000377 3.3e-26 124.0 128 53.1
FAN07G2354 Fragaria x ananassa HOM05D006341 ORTHO05D000377 1.8e-16 91.7 145 41.4
Atru.chr5.3222 Acer truncatum HOM05D006341 ORTHO05D000377 1.7e-11 75.1 60 60.0


User provided reference genes

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