Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 0.0e+00 1446.4 723 100.0
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 2.2e-225 786.2 734 57.5
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.8e-225 785.0 725 57.7
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 7.0e-224 781.2 725 57.5
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 1.7e-217 760.0 725 56.6
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 3.8e-214 748.8 728 55.2
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 1.1e-213 747.3 728 56.2
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 3.3e-213 745.7 659 59.6
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 3.6e-212 742.3 802 51.0
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 4.0e-211 738.8 657 59.1
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 6.8e-211 738.0 659 58.9
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 6.4e-209 731.5 626 62.0
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 1.6e-207 726.9 661 57.8
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 1.5e-205 720.3 654 57.8
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 6.2e-204 714.9 724 55.0
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.1e-200 704.1 736 53.3
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 6.0e-199 698.4 660 55.2
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 1.3e-198 697.2 685 54.7
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 1.3e-198 697.2 727 53.0
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 3.9e-198 695.7 722 52.1
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 1.1e-197 694.1 725 51.4
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.3e-197 692.6 627 58.4
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 7.3e-197 691.4 725 51.6
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 9.5e-197 691.0 725 51.3
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 9.5e-197 691.0 727 52.3
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.6e-196 690.3 725 51.4
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 2.1e-196 689.9 729 51.9
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.4e-195 687.2 734 51.6
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 4.4e-194 682.2 674 53.4
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 4.4e-194 682.2 725 51.0
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 9.8e-194 681.0 681 52.9
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 2.9e-193 679.5 698 52.1
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 8.3e-193 677.9 733 51.7
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 1.9e-192 676.8 729 51.7
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 2.4e-192 676.4 695 52.8
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 7.1e-192 674.9 648 53.4
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 2.7e-191 672.9 727 50.8
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 7.8e-191 671.4 723 51.0
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 1.1e-189 667.5 655 55.0
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 2.5e-189 666.4 680 52.6
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 1.2e-188 664.1 669 53.2
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 2.1e-188 663.3 669 52.9
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 3.1e-187 659.4 656 53.8
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 5.2e-187 658.7 725 49.5
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.2e-186 657.5 666 53.5
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 2.6e-186 656.4 726 50.8
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 4.4e-186 655.6 732 51.4
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 7.6e-186 654.8 732 50.5
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.4e-184 650.6 675 50.5
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 1.9e-184 650.2 729 50.2
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 3.2e-184 649.4 697 50.5
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 4.1e-184 649.0 729 50.3
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 3.5e-183 646.0 658 52.7
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 5.1e-182 642.1 730 49.0
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 7.3e-181 638.3 721 50.1
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 2.1e-180 636.7 676 52.4
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 1.8e-179 633.6 688 51.0
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 1.2e-178 630.9 724 48.9
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 1.2e-178 630.9 724 48.9
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 2.0e-178 630.2 732 48.5
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 9.9e-178 627.9 722 48.6
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.3e-177 627.5 669 51.9
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 6.4e-177 625.2 652 51.2
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 1.4e-176 624.0 644 52.5
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 9.3e-176 621.3 729 48.4
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 3.5e-175 619.4 723 48.5
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 7.8e-175 618.2 722 48.1
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 1.7e-174 617.1 627 53.7
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 1.7e-174 617.1 736 48.4
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 6.6e-174 615.1 722 47.6
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 9.6e-173 611.3 732 47.3
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.8e-172 609.8 644 51.7
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 1.4e-171 607.4 694 48.4
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.5e-170 604.0 744 46.8
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 3.8e-169 599.4 699 48.1
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 9.6e-165 584.7 634 50.5
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 9.6e-157 558.1 740 45.5
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 1.4e-155 554.3 562 52.7
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 1.4e-152 544.3 478 59.2
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 1.2e-151 541.2 690 44.6
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 2.1e-151 540.4 653 47.2
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 8.7e-150 535.0 492 56.9
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 3.3e-149 533.1 497 55.9
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 1.3e-148 531.2 707 46.4
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 8.7e-142 508.4 537 51.4
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 1.9e-141 507.3 615 48.5
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 4.5e-138 496.1 537 49.9
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 3.3e-133 479.9 615 47.8
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 5.0e-129 466.1 359 65.2
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 8.5e-129 465.3 511 49.5
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.2e-127 461.5 386 61.9
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 8.0e-119 432.2 312 69.2
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 2.2e-116 424.1 352 62.2
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 9.1e-115 418.7 670 39.0
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 1.4e-110 404.8 318 63.8
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 1.8e-110 404.4 347 62.2
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.8e-103 380.6 414 52.7
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 2.5e-96 357.5 664 34.8
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.1e-95 354.4 308 59.1
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 3.4e-93 347.1 382 48.7
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 7.8e-90 335.9 704 32.7
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 5.6e-88 329.7 379 48.0
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 7.8e-74 282.7 564 33.3
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 3.9e-73 280.4 653 32.3
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 4.9e-68 263.5 325 48.3
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 1.1e-64 252.3 625 30.7
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 7.3e-64 249.6 407 40.3
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 1.8e-62 245.0 333 41.7
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 9.3e-51 206.1 159 60.4
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.1e-47 194.9 342 37.4
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 1.4e-43 182.2 211 44.5
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 1.9e-43 181.8 163 58.9
Nitab4.5_0004070g0110 Nicotiana tabacum HOM05D006226 ORTHO05D007738 4.2e-43 180.6 245 41.6
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 1.7e-36 158.7 124 62.9
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 1.7e-36 158.7 130 60.8
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 2.2e-36 158.3 191 46.1
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 4.6e-34 150.6 244 37.7
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 1.3e-28 132.5 137 46.0
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 7.2e-27 126.7 310 31.0
HanXRQChr00c0062g0571541 Helianthus annuus HOM05D006226 ORTHO05D007738 2.2e-23 115.2 172 40.1
Lsat_1_v5_gn_4_168221 Lactuca sativa HOM05D006226 ORTHO05D007738 6.9e-22 110.2 128 48.4
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 2.7e-18 98.2 78 60.3
CDE04G0435 Ceratophyllum demersum HOM05D006226 ORTHO05D007738 1.1e-14 86.3 155 37.4
Pp3c24_3750 Physcomitrium patens HOM05D028917 ORTHO05D023487 2.4e-14 85.1 361 24.1
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 2.4e-14 85.1 80 51.2
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 2.0e-13 82.0 117 41.9
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 1.1e-11 76.3 215 28.4
Mapoly0061s0136 Marchantia polymorpha HOM05D028917 ORTHO05D023487 4.2e-11 74.3 280 25.0
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 1.0e-09 69.7 72 47.2
PRCOL_00000419 Prasinoderma coloniale HOM05D006226 ORTHO05D023487 3.3e-08 64.7 225 26.7
AagrBONN_evm.TU.Sc2ySwM_362.2567 Anthoceros agrestis HOM05D028917 ORTHO05D023487 7.0e-06 57.0 149 30.2


User provided reference genes

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