Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g15990 Coffea canephora HOM05D006918 ORTHO05D008525 6.3e-79 299.3 569 100.0
CSS0032788 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.8e-42 177.6 119 72.3
Dinv19625 Davidia involucrata HOM05D006918 ORTHO05D008525 4.7e-42 176.8 119 72.3
CSS0007445 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 1.4e-41 175.3 120 70.8
CSS0011318 Camellia sinensis var. sinensis HOM05D006918 ORTHO05D008525 2.0e-40 171.4 120 69.2
Potri.011G144300 Populus trichocarpa HOM05D006918 ORTHO05D008525 2.7e-37 161.0 120 64.2
DCAR_016820 Daucus carota HOM05D006918 ORTHO05D008525 3.5e-37 160.6 119 67.2
Oeu056983.1 Olea europaea HOM05D006918 ORTHO05D008525 3.5e-37 160.6 416 78.1
Haze_08532 Corylus avellana HOM05D006918 ORTHO05D008525 4.6e-37 160.2 120 65.0
Sabra11G0128500 Salix brachista HOM05D006918 ORTHO05D008525 4.6e-37 160.2 120 64.2
Cfa019430 Carpinus fangiana HOM05D006918 ORTHO05D008525 1.3e-36 158.7 120 64.2
Thecc.07G154400 Theobroma cacao HOM05D006918 ORTHO05D008525 6.6e-36 156.4 120 59.2
Lsat_1_v5_gn_7_72161 Lactuca sativa HOM05D006918 ORTHO05D008525 1.1e-35 155.6 119 66.4
TAR627G0890 Trochodendron aralioides HOM05D006918 ORTHO05D008525 1.5e-35 155.2 413 82.8
CiPaw.12G045100 Carya illinoinensis HOM05D006918 ORTHO05D008525 2.5e-35 154.5 121 64.5
Nn7g37872 Nelumbo nucifera HOM05D006918 ORTHO05D008525 2.5e-35 154.5 120 60.8
CANSAT56G0998 Cannabis sativa HOM05D006918 ORTHO05D008525 9.6e-35 152.5 119 64.7
MD10G1198700 Malus domestica HOM05D006918 ORTHO05D008525 9.6e-35 152.5 120 62.5
Manes.14G015600 Manihot esculenta HOM05D006918 ORTHO05D008525 2.1e-34 151.4 120 60.0
ClCG11G016340 Citrullus lanatus HOM05D006918 ORTHO05D008525 8.1e-34 149.4 120 59.2
Migut.M01563 Erythranthe guttata HOM05D006918 ORTHO05D008525 8.1e-34 149.4 121 60.3
Duzib187G0932 Durio zibethinus HOM05D006918 ORTHO05D008525 1.1e-33 149.1 119 57.1
Duzib187G1351 Durio zibethinus HOM05D006918 ORTHO05D008525 1.1e-33 149.1 119 57.1
Prupe.4G143000 Prunus persica HOM05D006918 ORTHO05D008525 1.4e-33 148.7 120 60.8
Lj3g0009186 Lotus japonicus HOM05D006918 ORTHO05D008525 2.4e-33 147.9 122 63.1
PGSC0003DMG400022129 Solanum tuberosum HOM05D006918 ORTHO05D008525 4.0e-33 147.1 128 61.7
DCAR_013746 Daucus carota HOM05D006918 ORTHO05D008525 5.3e-33 146.7 113 62.8
Potri.001G457300 Populus trichocarpa HOM05D006918 ORTHO05D008525 5.3e-33 146.7 120 59.2
QL04p074473 Quercus lobata HOM05D006918 ORTHO05D008525 5.3e-33 146.7 121 62.8
Eucgr.F03183 Eucalyptus grandis HOM05D006918 ORTHO05D008525 2.0e-32 144.8 119 58.8
Sabra16G0310000 Salix brachista HOM05D006918 ORTHO05D008525 2.0e-32 144.8 120 58.3
Sed0019951 Sechium edule HOM05D006918 ORTHO05D008525 2.0e-32 144.8 120 57.5
Atru.chr12.2189 Acer truncatum HOM05D006918 ORTHO05D008525 2.6e-32 144.4 119 56.3
MD05G1216400 Malus domestica HOM05D006918 ORTHO05D008525 2.6e-32 144.4 120 59.2
PSO541G4556 Papaver somniferum HOM05D006918 ORTHO05D008525 2.6e-32 144.4 117 57.3
PSO675G9078 Papaver somniferum HOM05D006918 ORTHO05D008525 2.6e-32 144.4 117 57.3
Peaxi162Scf00452g00086 Petunia axillaris HOM05D006918 ORTHO05D008525 2.6e-32 144.4 428 75.7
Cpa.g.sc10.35 Carica papaya HOM05D006918 ORTHO05D008525 3.4e-32 144.1 121 61.2
Gohir.D05G330400 Gossypium hirsutum HOM05D006918 ORTHO05D008525 3.4e-32 144.1 120 54.2
Gorai.009G354800 Gossypium raimondii HOM05D006918 ORTHO05D008525 3.4e-32 144.1 120 54.2
Sc03g0007940 Simmondsia chinensis HOM05D006918 ORTHO05D008525 3.4e-32 144.1 120 57.5
MSTRG.7057 Avicennia marina HOM05D006918 ORTHO05D008525 5.8e-32 143.3 420 75.5
Phvul.005G056300 Phaseolus vulgaris HOM05D006918 ORTHO05D008525 5.8e-32 143.3 122 61.5
Solyc07g066390.1 Solanum lycopersicum HOM05D006918 ORTHO05D008525 5.8e-32 143.3 428 82.0
Sopen07g034560 Solanum pennellii HOM05D006918 ORTHO05D008525 5.8e-32 143.3 428 82.0
Lalb_Chr01g0007081 Lupinus albus HOM05D006918 ORTHO05D008525 7.6e-32 142.9 122 60.7
RcHm_v2.0_Chr5g0026921 Rosa chinensis HOM05D006918 ORTHO05D008525 7.6e-32 142.9 120 59.2
CsaV3_4G031810 Cucumis sativus L. HOM05D006918 ORTHO05D008525 1.3e-31 142.1 119 58.0
FAN21G2086 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.2e-31 141.4 119 59.7
FAN21G2559 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.2e-31 141.4 119 59.7
TWI39G1081 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 3.8e-31 140.6 113 59.3
FvH4_3g15990 Fragaria vesca HOM05D006918 ORTHO05D008525 4.9e-31 140.2 119 59.7
FAN11G3197 Fragaria x ananassa HOM05D006918 ORTHO05D008525 4.9e-31 140.2 119 59.7
Lalb_Chr25g0285091 Lupinus albus HOM05D006918 ORTHO05D008525 6.4e-31 139.8 119 60.5
VMungo1080G0996 Vigna mungo HOM05D006918 ORTHO05D008525 6.4e-31 139.8 122 59.8
FAN25G3485 Fragaria x ananassa HOM05D006918 ORTHO05D008525 8.4e-31 139.4 120 58.3
Nitab4.5_0001749g0050 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.1e-30 139.0 127 58.3
Nitab4.5_0008437g0030 Nicotiana tabacum HOM05D006918 ORTHO05D008525 1.9e-30 138.3 121 61.2
Glyma.15G254900 Glycine max HOM05D006918 ORTHO05D008525 4.2e-30 137.1 122 59.0
MELO3C010560.2 Cucumis melo HOM05D006918 ORTHO05D008525 7.1e-30 136.3 119 55.5
Lalb_Chr19g0133401 Lupinus albus HOM05D006918 ORTHO05D008525 7.1e-30 136.3 121 58.7
Glyma.08G172400 Glycine max HOM05D006918 ORTHO05D008525 1.6e-29 135.2 122 59.0
Ah.04g163440 Amaranthus hybridus HOM05D006918 ORTHO05D008525 2.1e-29 134.8 113 58.4
EL10Ac4g08564 Beta vulgaris HOM05D006918 ORTHO05D008525 3.5e-29 134.0 113 57.5
AUR62043059 Chenopodium quinoa HOM05D006918 ORTHO05D008525 4.6e-29 133.7 113 57.5
AUR62044624 Chenopodium quinoa HOM05D006918 ORTHO05D008525 4.6e-29 133.7 113 57.5
Lj5A202T40 Lonicera japonica HOM05D006918 ORTHO05D008525 2.3e-28 131.3 124 56.5
HanXRQChr05g0161001 Helianthus annuus HOM05D006918 ORTHO05D008525 8.7e-28 129.4 125 58.4
CAN.G943.32 Capsicum annuum HOM05D006918 ORTHO05D008525 2.5e-27 127.9 134 54.5
Ciclev10019503m.g Citrus clementina HOM05D006918 ORTHO05D008525 3.3e-27 127.5 116 56.9
Lj5C202T5 Lonicera japonica HOM05D006918 ORTHO05D008525 3.3e-27 127.5 126 54.8
Ca_03688_v3 Cicer arietinum L. HOM05D006918 ORTHO05D008525 4.3e-27 127.1 129 53.5
TAR636G1403 Trochodendron aralioides HOM05D006918 ORTHO05D008525 2.1e-26 124.8 85 67.1
Rhsim04G0005900 Rhododendron simsii HOM05D006918 ORTHO05D008525 2.8e-26 124.4 122 52.5
TWI38G1170 Tripterygium wilfordii HOM05D006918 ORTHO05D008525 3.7e-26 124.0 115 53.0
Dinv42519 Davidia involucrata HOM05D006918 ORTHO05D008525 1.1e-25 122.5 65 86.2
Aqoxy6G01201 Aquilegia oxysepala HOM05D006918 ORTHO05D008525 3.1e-25 120.9 121 48.8
TPR.G9758 Trifolium pratense HOM05D006918 ORTHO05D008525 6.9e-25 119.8 123 55.3
Medtr2g069680 Medicago truncatula HOM05D006918 ORTHO05D008525 2.0e-24 118.2 126 52.4
PGR031G3805 Punica granatum HOM05D006918 ORTHO05D008525 3.8e-23 114.0 132 51.5
TPR.G9735 Trifolium pratense HOM05D006918 ORTHO05D008525 4.9e-23 113.6 123 49.6
CDE04G0465 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 3.2e-22 110.9 70 70.0
TPR.G9740 Trifolium pratense HOM05D006918 ORTHO05D008525 2.1e-21 108.2 117 49.6
THA.LOC104808118 Tarenaya hassleriana HOM05D006918 ORTHO05D008525 4.6e-21 107.1 118 51.7
Psat1g002800 Pisum sativum HOM05D006918 ORTHO05D008525 1.0e-20 105.9 124 48.4
SGA_v2.0_scaffold7G03576 Striga asiatica HOM05D006918 ORTHO05D008525 8.7e-20 102.8 103 53.4
Carub.0002s2595 Capsella rubella HOM05D006918 ORTHO05D008525 2.4e-17 94.7 128 45.3
Thhalv10018334m.g Eutrema salsugineum HOM05D006918 ORTHO05D008525 1.2e-16 92.4 133 43.6
AL2G39540 Arabidopsis lyrata HOM05D006918 ORTHO05D008525 1.5e-16 92.0 132 44.7
CARHR072750 Cardamine hirsuta HOM05D006918 ORTHO05D008525 4.5e-16 90.5 135 41.5
AT1G79080 Arabidopsis thaliana HOM05D006918 ORTHO05D008525 7.6e-16 89.7 130 41.5
Aa31LG4G1910 Aethionema arabicum HOM05D001696 ORTHO05D001746 1.3e-15 89.0 130 42.3
Sp5g34130 Schrenkiella parvula HOM05D006918 ORTHO05D008525 1.3e-15 89.0 133 42.9
BcaC08g47472 Brassica carinata HOM05D006918 ORTHO05D008525 2.9e-15 87.8 88 48.9
C06p52950 Brassica napus HOM05D006918 ORTHO05D008525 2.9e-15 87.8 88 48.9
BolC6t40313H Brassica oleracea HOM05D006918 ORTHO05D008525 3.8e-15 87.4 127 42.5
A07p44220 Brassica napus HOM05D006918 ORTHO05D008525 2.1e-13 81.6 88 46.6
BraA07t31930Z Brassica rapa HOM05D006918 ORTHO05D008525 2.7e-13 81.3 88 46.6
HPP92_013913 Vanilla planifolia HOM05D006918 ORTHO05D008525 7.9e-13 79.7 122 38.5
HPP92_013983 Vanilla planifolia HOM05D006918 ORTHO05D008525 1.0e-12 79.3 122 38.5
SalBow8G1439 Salvia bowleyana HOM05D006918 ORTHO05D008525 1.3e-12 79.0 50 72.0
ATR1098G023 Amborella trichopoda HOM05D006918 ORTHO05D008525 3.0e-12 77.8 43 81.4
Cfa019933 Carpinus fangiana HOM05D006918 ORTHO05D008525 6.7e-12 76.6 49 71.4
CDE12G0330 Ceratophyllum demersum HOM05D006918 ORTHO05D008525 1.6e-10 72.0 52 63.5
BcaNung04908 Brassica carinata HOM05D006918 ORTHO05D008525 6.3e-10 70.1 83 41.0
BcaB02g08665 Brassica carinata HOM05D006918 ORTHO05D008525 8.2e-10 69.7 123 36.6
BcaC08g47471 Brassica carinata HOM05D006918 ORTHO05D008525 2.6e-08 64.7 56 55.4
FAN16G1729 Fragaria x ananassa HOM05D006918 ORTHO05D008525 2.9e-07 61.2 39 66.7


User provided reference genes

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