Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g08110 Coffea canephora HOM05D008991 ORTHO05D010442 5.2e-128 461.8 402 100.0
TWI59G0499 Tripterygium wilfordii HOM05D012920 ORTHO05D012188 5.0e-14 83.2 152 41.4
Dinv15461 Davidia involucrata HOM05D008991 ORTHO05D010442 4.7e-12 76.6 127 49.6
BcaB01g03456 Brassica carinata HOM05D008991 ORTHO05D010442 5.2e-11 73.2 121 46.3
Actinidia30443 Actinidia chinensis HOM05D008991 ORTHO05D010442 1.5e-10 71.6 133 45.1
Lsat_1_v5_gn_8_139801 Lactuca sativa HOM05D008991 ORTHO05D010442 1.5e-10 71.6 133 43.6
Migut.H02156 Erythranthe guttata HOM05D008991 ORTHO05D010442 4.4e-10 70.1 122 45.9
Oeu036098.1 Olea europaea HOM05D008991 ORTHO05D010442 5.8e-10 69.7 184 38.6
BolC4t28480H Brassica oleracea HOM05D008991 ORTHO05D010442 2.9e-09 67.4 136 40.4
BcaC02g07231 Brassica carinata HOM05D008991 ORTHO05D010442 6.4e-09 66.2 135 40.0
AT2G42560 Arabidopsis thaliana HOM05D008991 ORTHO05D010442 1.1e-08 65.5 145 40.7
TAR626G0119 Trochodendron aralioides HOM05D008991 ORTHO05D038496 1.1e-08 65.5 108 44.4
A04p32280 Brassica napus HOM05D008991 ORTHO05D010442 1.4e-08 65.1 135 40.7
BraA04t18682Z Brassica rapa HOM05D008991 ORTHO05D010442 1.4e-08 65.1 135 40.7
CARHR137700 Cardamine hirsuta HOM05D008991 ORTHO05D010442 1.4e-08 65.1 138 41.3
Sp4g24690 Schrenkiella parvula HOM05D008991 ORTHO05D010442 1.4e-08 65.1 143 40.6
CAN.G1360.5 Capsicum annuum HOM05D011296 ORTHO05D013264 1.9e-08 64.7 195 34.4
SGA_v2.0_scaffold322G48604 Striga asiatica HOM05D008991 ORTHO05D010442 3.2e-08 63.9 402 26.4
BcaB06g29254 Brassica carinata HOM05D008991 ORTHO05D010442 4.1e-08 63.5 136 41.2
Lj1A689G19 Lonicera japonica HOM05D011296 ORTHO05D010442 4.1e-08 63.5 98 48.0
C04p69790 Brassica napus HOM05D008991 ORTHO05D010442 5.4e-08 63.2 135 39.3
Peaxi162Scf00469g00010 Petunia axillaris HOM05D011296 ORTHO05D010442 5.4e-08 63.2 204 31.4
AL4G41110 Arabidopsis lyrata HOM05D008991 ORTHO05D010442 7.1e-08 62.8 142 38.7
Carub.0004s2501 Capsella rubella HOM05D008991 ORTHO05D010442 1.6e-07 61.6 142 39.4
PGR142G1329 Punica granatum HOM05D008991 ORTHO05D010442 2.1e-07 61.2 137 38.7
PGSC0003DMG400019976 Solanum tuberosum HOM05D011296 ORTHO05D013264 2.7e-07 60.8 153 39.2
DCAR_009769 Daucus carota HOM05D008991 ORTHO05D010442 4.6e-07 60.1 144 38.2
Hma1.2p1_0178F.1_g079010 Hydrangea macrophylla HOM05D011296 ORTHO05D013264 4.6e-07 60.1 166 37.3
Potri.019G090300 Populus trichocarpa HOM05D026498 ORTHO05D010442 4.6e-07 60.1 157 35.7
Sopen07g027330 Solanum pennellii HOM05D011296 ORTHO05D013264 6.0e-07 59.7 157 36.9
Aa31LG1G24360 Aethionema arabicum HOM05D008991 ORTHO05D010442 7.8e-07 59.3 131 38.9
BcaNung03228 Brassica carinata HOM05D008991 ORTHO05D010442 1.0e-06 58.9 123 40.7
Manes.13G139000 Manihot esculenta HOM05D012920 ORTHO05D012188 1.0e-06 58.9 169 36.7
Sabra19G0100600 Salix brachista HOM05D026498 ORTHO05D010442 1.0e-06 58.9 128 38.3
CiPaw.04G131500 Carya illinoinensis HOM05D008991 ORTHO05D010442 1.3e-06 58.5 179 33.5
Nitab4.5_0000822g0060 Nicotiana tabacum HOM05D022155 ORTHO05D018888 1.7e-06 58.2 106 42.5
Sabra19G0104000 Salix brachista HOM05D026498 ORTHO05D010442 1.7e-06 58.2 114 40.4
Ca_01464_v3 Cicer arietinum L. HOM05D012920 ORTHO05D012188 2.3e-06 57.8 162 33.3
Solyc07g053360.4 Solanum lycopersicum HOM05D011296 ORTHO05D013264 2.3e-06 57.8 154 36.4
CAN.G782.7 Capsicum annuum HOM05D022155 ORTHO05D018888 3.9e-06 57.0 88 45.5
Cfa014713 Carpinus fangiana HOM05D008991 ORTHO05D010442 6.6e-06 56.2 202 30.2
PGR142G3325 Punica granatum HOM05D020995 ORTHO05D010442 6.6e-06 56.2 80 51.2
Cpa.g.sc209.19 Carica papaya HOM05D008991 ORTHO05D010442 8.6e-06 55.8 158 36.1
VMungo1127G0688 Vigna mungo HOM05D012920 ORTHO05D012188 8.6e-06 55.8 149 32.2


User provided reference genes

Program Settings