Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g02700 Coffea canephora HOM05D004392 ORTHO05D004846 5.4e-113 411.0 207 100.0
Cc02_g39950 Coffea canephora HOM05D004392 ORTHO05D004846 1.7e-85 319.7 181 89.0
Cc06_g21290 Coffea canephora HOM05D004392 ORTHO05D004846 1.5e-62 243.4 207 66.7
Migut.B01921 Erythranthe guttata HOM05D004392 ORTHO05D004846 4.8e-53 211.8 181 59.7
Dinv34257 Davidia involucrata HOM05D004392 ORTHO05D004846 1.8e-52 209.9 164 65.2
Oeu028215.3 Olea europaea HOM05D004392 ORTHO05D004846 3.1e-52 209.1 183 58.5
Hma1.2p1_0074F.1_g038710 Hydrangea macrophylla HOM05D004392 ORTHO05D004846 7.0e-52 208.0 190 54.7
SalBow3G1181 Salvia bowleyana HOM05D004392 ORTHO05D004846 5.9e-51 204.9 180 55.6
SalBow3G3735 Salvia bowleyana HOM05D004392 ORTHO05D004846 5.9e-51 204.9 180 55.6
TAR636G2848 Trochodendron aralioides HOM05D004392 ORTHO05D004846 5.9e-51 204.9 172 59.9
Actinidia08006 Actinidia chinensis HOM05D004392 ORTHO05D004846 1.0e-50 204.1 175 57.1
GSVIVG01027438001 Vitis vinifera HOM05D004392 ORTHO05D004846 1.0e-50 204.1 174 58.6
CSS0004566 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 5.0e-50 201.8 175 56.6
CSS0009785 Camellia sinensis var. sinensis HOM05D004392 ORTHO05D004846 1.5e-49 200.3 175 56.0
Cfa003736 Carpinus fangiana HOM05D004392 ORTHO05D004846 1.9e-49 199.9 181 59.1
Rhsim07G0000300 Rhododendron simsii HOM05D004392 ORTHO05D004846 2.5e-49 199.5 175 56.0
Lj9C607G8 Lonicera japonica HOM05D004392 ORTHO05D004846 4.2e-49 198.7 175 61.1
Nn3g18803 Nelumbo nucifera HOM05D004392 ORTHO05D004846 1.6e-48 196.8 170 58.2
TAR629G2483 Trochodendron aralioides HOM05D004392 ORTHO05D004846 2.1e-48 196.4 170 59.4
Haze_15733 Corylus avellana HOM05D004392 ORTHO05D004846 3.0e-47 192.6 175 58.9
Sabra14G0077700 Salix brachista HOM05D004392 ORTHO05D004846 3.4e-46 189.1 159 57.9
QL08p047226 Quercus lobata HOM05D004392 ORTHO05D004846 9.8e-46 187.6 182 56.0
Gohir.A12G116600 Gossypium hirsutum HOM05D004392 ORTHO05D004846 1.3e-45 187.2 195 51.8
MD07G1159400 Malus domestica HOM05D004392 ORTHO05D004846 1.3e-45 187.2 182 53.8
Duzib138G1478 Durio zibethinus HOM05D004392 ORTHO05D004846 2.2e-45 186.4 192 51.0
Ciclev10018449m.g Citrus clementina HOM05D004392 ORTHO05D004846 4.9e-45 185.3 192 52.6
Prupe.2G197500 Prunus persica HOM05D004392 ORTHO05D004846 8.3e-45 184.5 195 49.7
Hund27149 Selenicereus undatus HOM05D004392 ORTHO05D004846 1.4e-44 183.7 169 54.4
Atru.chr5.766 Acer truncatum HOM05D004392 ORTHO05D004846 2.4e-44 183.0 192 50.5
MBI12_g11801_MAGBIO Magnolia biondii HOM05D004392 ORTHO05D004846 2.4e-44 183.0 160 57.5
Potri.014G105601 Populus trichocarpa HOM05D004392 ORTHO05D004846 2.4e-44 183.0 165 55.2
Gorai.008G130800 Gossypium raimondii HOM05D004392 ORTHO05D004846 3.1e-44 182.6 195 50.3
Thecc.01G333400 Theobroma cacao HOM05D004392 ORTHO05D004846 3.1e-44 182.6 192 51.0
Nitab4.5_0000006g0150 Nicotiana tabacum HOM05D004392 ORTHO05D004846 4.1e-44 182.2 199 49.2
Sc01g0002200 Simmondsia chinensis HOM05D004392 ORTHO05D004846 5.4e-44 181.8 176 52.8
FAN10G3859 Fragaria x ananassa HOM05D004392 ORTHO05D004846 7.0e-44 181.4 195 49.7
Nitab4.5_0011074g0010 Nicotiana tabacum HOM05D004392 ORTHO05D004846 9.2e-44 181.0 199 49.2
Cpa.g.sc193.10 Carica papaya HOM05D004392 ORTHO05D004846 1.2e-43 180.6 174 52.9
RcHm_v2.0_Chr1g0361071 Rosa chinensis HOM05D004392 ORTHO05D004846 1.2e-43 180.6 195 50.3
AUR62004560 Chenopodium quinoa HOM05D004392 ORTHO05D004846 1.6e-43 180.3 170 55.3
AUR62022676 Chenopodium quinoa HOM05D004392 ORTHO05D004846 1.6e-43 180.3 169 54.4
FAN01G0919 Fragaria x ananassa HOM05D004392 ORTHO05D004846 2.0e-43 179.9 174 55.2
Manes.01G240000 Manihot esculenta HOM05D004392 ORTHO05D004846 2.0e-43 179.9 175 53.7
FvH4_7g17640 Fragaria vesca HOM05D004392 ORTHO05D004846 2.7e-43 179.5 174 54.6
FAN06G0139 Fragaria x ananassa HOM05D004392 ORTHO05D004846 2.7e-43 179.5 174 54.6
FAN06G0296 Fragaria x ananassa HOM05D004392 ORTHO05D004846 2.7e-43 179.5 174 54.6
Gohir.D12G120100 Gossypium hirsutum HOM05D004392 ORTHO05D004846 7.8e-43 177.9 195 49.7
COL.COLO4_23048 Corchorus olitorius HOM05D004392 ORTHO05D004846 1.3e-42 177.2 165 54.5
Peaxi162Scf00462g00512 Petunia axillaris HOM05D004392 ORTHO05D004846 2.9e-42 176.0 181 49.7
CiPaw.01G082300 Carya illinoinensis HOM05D004392 ORTHO05D004846 3.8e-42 175.6 161 56.5
Ah.05g178970 Amaranthus hybridus HOM05D004392 ORTHO05D004846 5.0e-42 175.3 170 54.7
FAN10G1489 Fragaria x ananassa HOM05D004392 ORTHO05D004846 6.6e-42 174.9 195 47.7
CAN.G929.34 Capsicum annuum HOM05D004392 ORTHO05D004846 8.6e-42 174.5 181 49.7
QL10p065016 Quercus lobata HOM05D004392 ORTHO05D004846 2.5e-41 172.9 190 51.6
TWI59G0442 Tripterygium wilfordii HOM05D004392 ORTHO05D004846 2.5e-41 172.9 174 52.3
FAN03G2506 Fragaria x ananassa HOM05D004392 ORTHO05D004846 3.3e-41 172.6 174 53.4
vmacro00027 Vaccinium macrocarpon HOM05D004392 ORTHO05D004846 3.3e-41 172.6 136 62.5
MSTRG.17382 Avicennia marina HOM05D004392 ORTHO05D004846 7.3e-41 171.4 183 51.4
EL10Ac1g00187 Beta vulgaris HOM05D004392 ORTHO05D004846 7.3e-41 171.4 170 52.9
Aqoxy5G04345 Aquilegia oxysepala HOM05D004392 ORTHO05D004846 1.2e-40 170.6 192 46.4
Sopen05g026910 Solanum pennellii HOM05D004392 ORTHO05D004846 1.2e-40 170.6 181 48.1
Glyma.16G018400 Glycine max HOM05D004392 ORTHO05D004846 1.6e-40 170.2 191 47.6
Solyc05g044610.3 Solanum lycopersicum HOM05D004392 ORTHO05D004846 1.6e-40 170.2 181 48.1
SGA_v2.0_scaffold98G29423 Striga asiatica HOM05D004392 ORTHO05D004846 2.1e-40 169.9 167 50.9
Lj3g0000602 Lotus japonicus HOM05D004392 ORTHO05D004846 3.6e-40 169.1 188 48.4
Ca_26063_v3 Cicer arietinum L. HOM05D004392 ORTHO05D004846 4.7e-40 168.7 164 54.9
Glyma.07G049700 Glycine max HOM05D004392 ORTHO05D004846 4.7e-40 168.7 169 51.5
arahy.Tifrunner.gnm1.ann1.9PW2R5 Arachis hypogaea HOM05D004392 ORTHO05D004846 8.0e-40 167.9 195 47.2
DCAR_013954 Daucus carota HOM05D004392 ORTHO05D004846 1.4e-39 167.2 172 51.2
Lsat_1_v5_gn_3_140700 Lactuca sativa HOM05D004392 ORTHO05D004846 8.9e-39 164.5 164 49.4
arahy.Tifrunner.gnm1.ann1.H04KSL Arachis hypogaea HOM05D004392 ORTHO05D004846 1.2e-38 164.1 195 47.7
TPR.G19826 Trifolium pratense HOM05D004392 ORTHO05D004846 2.6e-38 162.9 170 51.2
Medtr8g024320 Medicago truncatula HOM05D004392 ORTHO05D004846 3.4e-38 162.5 170 52.4
Lalb_Chr10g0100861 Lupinus albus HOM05D004392 ORTHO05D004846 4.4e-38 162.2 191 46.6
unitig_736.g22806 Utricularia gibba HOM05D004392 ORTHO05D004846 5.8e-38 161.8 169 50.3
ATR0304G014 Amborella trichopoda HOM05D004392 ORTHO05D004846 9.8e-38 161.0 170 49.4
Phvul.010G119400 Phaseolus vulgaris HOM05D004392 ORTHO05D004846 1.3e-37 160.6 186 47.3
CDE02G2120 Ceratophyllum demersum HOM05D004392 ORTHO05D004846 2.2e-37 159.8 177 48.6
Psat4g164000 Pisum sativum HOM05D004392 ORTHO05D004846 1.1e-36 157.5 170 50.6
PSO063G6286 Papaver somniferum HOM05D004392 ORTHO05D004846 1.9e-36 156.8 167 47.9
ECA233G3878 Erigeron canadensis HOM05D004392 ORTHO05D004846 3.2e-36 156.0 168 48.2
PGR031G1055 Punica granatum HOM05D004392 ORTHO05D004846 3.2e-36 156.0 167 46.1
VMungo0331G0990 Vigna mungo HOM05D004392 ORTHO05D004846 3.2e-36 156.0 168 49.4
THA.LOC104801349 Tarenaya hassleriana HOM05D004392 ORTHO05D004846 1.2e-35 154.1 186 44.1
Aa31LG5G1150 Aethionema arabicum HOM05D004392 ORTHO05D004846 1.0e-34 151.0 181 42.5
PSO782G2296 Papaver somniferum HOM05D004392 ORTHO05D004846 1.0e-34 151.0 167 46.7
AT4G00800 Arabidopsis thaliana HOM05D004392 ORTHO05D004846 1.7e-34 150.2 176 44.3
AL6G52660 Arabidopsis lyrata HOM05D004392 ORTHO05D004846 5.0e-34 148.7 191 40.3
Eucgr.D02650 Eucalyptus grandis HOM05D004392 ORTHO05D004846 6.6e-34 148.3 199 43.2
BcaC04g24098 Brassica carinata HOM05D004392 ORTHO05D004846 8.6e-34 147.9 202 37.6
CARHR249530 Cardamine hirsuta HOM05D004392 ORTHO05D004846 1.9e-33 146.7 185 42.2
Carub.0006s3583 Capsella rubella HOM05D004392 ORTHO05D004846 2.5e-33 146.4 188 42.0
C09p01080 Brassica napus HOM05D004392 ORTHO05D004846 3.3e-33 146.0 202 37.1
BolC9t53041H Brassica oleracea HOM05D004392 ORTHO05D004846 3.3e-33 146.0 197 38.1
BraA09t35770Z Brassica rapa HOM05D004392 ORTHO05D004846 4.3e-33 145.6 202 37.6
MELO3C005953.2 Cucumis melo HOM05D004392 ORTHO05D004846 5.6e-33 145.2 193 40.9
A09p00990 Brassica napus HOM05D004392 ORTHO05D004846 7.3e-33 144.8 202 37.1
BcaB01g02315 Brassica carinata HOM05D004392 ORTHO05D004846 2.8e-32 142.9 192 37.5
Thhalv10028358m.g Eutrema salsugineum HOM05D004392 ORTHO05D004846 4.7e-32 142.1 200 38.5
Sed0010760 Sechium edule HOM05D004392 ORTHO05D004846 8.0e-32 141.4 187 44.4
Sp6g01320 Schrenkiella parvula HOM05D004392 ORTHO05D004846 1.1e-31 141.0 177 40.7
HanXRQChr11g0352941 Helianthus annuus HOM05D004392 ORTHO05D004846 1.4e-31 140.6 158 47.5
HanXRQChr11g0352951 Helianthus annuus HOM05D004392 ORTHO05D004846 1.4e-31 140.6 158 47.5
CsaV3_3G007340 Cucumis sativus L. HOM05D004392 ORTHO05D004846 4.0e-31 139.0 176 42.0
SEGI_29076 Sequoiadendron giganteum HOM05D004392 ORTHO05D004846 2.9e-29 132.9 186 40.9
HPP92_014635 Vanilla planifolia HOM05D004392 ORTHO05D004846 2.4e-28 129.8 180 38.9
Psat3g193680 Pisum sativum HOM05D003463 ORTHO05D030491 3.6e-24 115.9 103 54.4
Zm00001eb230740 Zea mays HOM05D004392 ORTHO05D004846 4.7e-24 115.5 161 36.6
SHI29617 Sapria himalayana HOM05D004392 ORTHO05D004846 1.7e-21 107.1 150 40.0
ClCG05G000190 Citrullus lanatus HOM05D004392 ORTHO05D004846 1.9e-20 103.6 178 37.1
AagrBONN_evm.TU.Sc2ySwM_368.256 Anthoceros agrestis HOM05D004392 ORTHO05D004846 1.2e-16 90.9 173 36.4
Mapoly0063s0095 Marchantia polymorpha HOM05D004392 ORTHO05D004846 4.7e-16 89.0 170 33.5
CAN.G929.33 Capsicum annuum HOM05D004392 ORTHO05D004846 2.6e-14 83.2 99 46.5
Lsat_1_v5_gn_7_90420 Lactuca sativa HOM05D004392 ORTHO05D004846 3.5e-11 72.8 77 46.8
Pp3c17_2710 Physcomitrium patens HOM05D004392 ORTHO05D004846 1.0e-10 71.2 174 31.6
Pp3c7_20800 Physcomitrium patens HOM05D004392 ORTHO05D004846 6.6e-10 68.6 163 31.3
Psat0s2975g0200 Pisum sativum HOM05D000832 ORTHO05D019229 1.1e-07 61.2 102 37.3


User provided reference genes

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