Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc05_g00540 Coffea canephora HOM05D004315 ORTHO05D005089 6.1e-216 753.8 371 100.0
Dinv05044 Davidia involucrata HOM05D004315 ORTHO05D005089 1.9e-161 572.8 358 81.0
DCAR_013332 Daucus carota HOM05D004315 ORTHO05D005089 2.8e-160 568.9 369 77.2
GSVIVG01020802001 Vitis vinifera HOM05D004315 ORTHO05D005089 9.0e-159 563.9 360 78.1
MBI18_g11296_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 8.4e-157 557.4 371 76.5
CSS0039894 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 7.1e-156 554.3 364 76.9
Hma1.2p1_0583F.1_g183050 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.6e-155 553.1 362 77.6
TAR629G1010 Trochodendron aralioides HOM05D004315 ORTHO05D005089 2.1e-155 552.7 358 78.2
MD09G1144800 Malus domestica HOM05D004315 ORTHO05D005089 3.5e-155 552.0 368 75.3
Nitab4.5_0001843g0170 Nicotiana tabacum HOM05D004315 ORTHO05D005089 7.9e-155 550.8 366 76.2
RcHm_v2.0_Chr2g0152961 Rosa chinensis HOM05D004315 ORTHO05D005089 1.0e-154 550.4 364 75.8
Potri.014G143500 Populus trichocarpa HOM05D004315 ORTHO05D005089 1.1e-153 547.0 368 75.3
FAN05G3231 Fragaria x ananassa HOM05D004315 ORTHO05D005089 2.5e-153 545.8 364 75.8
PGR031G0720 Punica granatum HOM05D004315 ORTHO05D005089 4.3e-153 545.0 361 77.0
Thecc.01G165100 Theobroma cacao HOM05D004315 ORTHO05D005089 4.3e-153 545.0 366 75.1
Peaxi162Scf00351g00818 Petunia axillaris HOM05D004315 ORTHO05D005089 7.4e-153 544.3 365 75.3
FvH4_6g39150 Fragaria vesca HOM05D004315 ORTHO05D005089 9.6e-153 543.9 364 75.5
FAN14G1093 Fragaria x ananassa HOM05D004315 ORTHO05D005089 9.6e-153 543.9 364 75.5
MD17G1131300 Malus domestica HOM05D004315 ORTHO05D005089 9.6e-153 543.9 364 74.7
CANSAT64G0449 Cannabis sativa HOM05D004315 ORTHO05D005089 1.6e-152 543.1 366 74.9
TWI59G1372 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 2.1e-152 542.7 359 75.5
TWI14G0586 Tripterygium wilfordii HOM05D004315 ORTHO05D005089 2.8e-152 542.3 359 76.3
CiPaw.03G190700 Carya illinoinensis HOM05D004315 ORTHO05D005089 3.7e-152 542.0 363 75.5
Oeu044867.2 Olea europaea HOM05D004315 ORTHO05D005089 6.3e-152 541.2 392 70.7
PSO675G7088 Papaver somniferum HOM05D004315 ORTHO05D005089 1.1e-151 540.4 362 76.8
Sopen07g023340 Solanum pennellii HOM05D004315 ORTHO05D005089 1.1e-151 540.4 358 76.3
CAN.G1316.2 Capsicum annuum HOM05D004315 ORTHO05D005089 1.4e-151 540.0 365 74.5
Prupe.3G183100 Prunus persica HOM05D004315 ORTHO05D005089 1.5e-150 536.6 366 72.7
Solyc07g044750.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 1.5e-150 536.6 362 74.6
Eucgr.A00888 Eucalyptus grandis HOM05D004315 ORTHO05D005089 2.0e-150 536.2 361 74.2
HanXRQChr01g0023901 Helianthus annuus HOM05D004315 ORTHO05D005089 4.5e-150 535.0 358 75.1
ATR0165G021 Amborella trichopoda HOM05D004315 ORTHO05D005089 2.2e-149 532.7 333 79.6
Aqoxy1G01576 Aquilegia oxysepala HOM05D004315 ORTHO05D005089 2.2e-149 532.7 358 75.7
Duzib264G0097 Durio zibethinus HOM05D004315 ORTHO05D005089 2.9e-149 532.3 364 73.6
arahy.Tifrunner.gnm1.ann1.8V1VF7 Arachis hypogaea HOM05D004315 ORTHO05D005089 3.8e-149 531.9 357 74.5
Nn3g20219 Nelumbo nucifera HOM05D004315 ORTHO05D005089 8.4e-149 530.8 358 75.1
PGSC0003DMG400021156 Solanum tuberosum HOM05D004315 ORTHO05D005089 8.4e-149 530.8 362 75.1
Lsat_1_v5_gn_2_30700 Lactuca sativa HOM05D004315 ORTHO05D005089 1.1e-148 530.4 355 75.2
Gohir.A05G380500 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.4e-148 530.0 364 73.9
Ciclev10031991m.g Citrus clementina HOM05D004315 ORTHO05D005089 3.2e-148 528.9 355 74.6
Gorai.012G039600 Gossypium raimondii HOM05D004315 ORTHO05D005089 4.2e-148 528.5 364 73.6
MBI02_g32064_MAGBIO Magnolia biondii HOM05D004315 ORTHO05D005089 4.2e-148 528.5 332 79.2
ECA248G0068 Erigeron canadensis HOM05D004315 ORTHO05D005089 1.2e-147 526.9 358 75.7
Glyma.02G281300 Glycine max HOM05D004315 ORTHO05D005089 1.2e-147 526.9 364 73.9
arahy.Tifrunner.gnm1.ann1.VQL6P1 Arachis hypogaea HOM05D004315 ORTHO05D005089 3.5e-147 525.4 363 73.3
Migut.H01268 Erythranthe guttata HOM05D004315 ORTHO05D005089 3.0e-146 522.3 366 72.4
MELO3C026388.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.1e-145 520.4 362 73.5
HanXRQChr14g0432981 Helianthus annuus HOM05D004315 ORTHO05D005089 5.7e-145 518.1 360 73.3
TPR.G24734 Trifolium pratense HOM05D004315 ORTHO05D005089 5.7e-145 518.1 365 70.7
LjContig00049g0028236 Lotus japonicus HOM05D004315 ORTHO05D005089 7.4e-145 517.7 370 71.6
HanXRQChr04g0115031 Helianthus annuus HOM05D004315 ORTHO05D005089 2.2e-144 516.2 360 73.3
Psat2g018080 Pisum sativum HOM05D004315 ORTHO05D005089 2.2e-144 516.2 371 70.9
SEGI_10868 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.4e-143 513.5 361 71.5
Nitab4.5_0006724g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 3.1e-143 512.3 339 76.4
Lalb_Chr10g0106401 Lupinus albus HOM05D004315 ORTHO05D005089 4.1e-143 511.9 360 71.7
Sabra14G0108500 Salix brachista HOM05D004315 ORTHO05D005089 4.1e-143 511.9 383 68.7
Medtr5g090130 Medicago truncatula HOM05D004315 ORTHO05D005089 9.0e-143 510.8 361 72.0
GSVIVG01021661001 Vitis vinifera HOM05D004315 ORTHO05D005089 1.5e-142 510.0 363 73.0
PSO541G6471 Papaver somniferum HOM05D004315 ORTHO05D005089 2.0e-142 509.6 342 76.9
vmacro03380 Vaccinium macrocarpon HOM05D004315 ORTHO05D005089 2.6e-142 509.2 358 70.1
Potri.001G466900 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.4e-142 508.8 335 75.5
Potri.011G164500 Populus trichocarpa HOM05D004315 ORTHO05D005089 3.4e-142 508.8 364 70.9
Sed0001791 Sechium edule HOM05D004315 ORTHO05D005089 3.4e-142 508.8 363 71.1
CSS0023242 Camellia sinensis var. sinensis HOM05D004315 ORTHO05D005089 1.0e-141 507.3 366 70.8
ClCG07G010830 Citrullus lanatus HOM05D004315 ORTHO05D005089 1.1e-140 503.8 356 70.8
MELO3C016194.2 Cucumis melo HOM05D004315 ORTHO05D005089 1.4e-140 503.4 356 71.3
Cfa000809 Carpinus fangiana HOM05D004315 ORTHO05D005089 2.5e-140 502.7 356 71.3
CiPaw.10G109400 Carya illinoinensis HOM05D004315 ORTHO05D005089 4.2e-140 501.9 368 69.6
Gohir.D04G035100 Gossypium hirsutum HOM05D004315 ORTHO05D005089 1.6e-139 500.0 339 74.3
VMungo0647G0619 Vigna mungo HOM05D004315 ORTHO05D005089 2.1e-139 499.6 366 69.7
Phvul.008G199600 Phaseolus vulgaris HOM05D004315 ORTHO05D005089 7.9e-139 497.7 367 68.7
COL.COLO4_29897 Corchorus olitorius HOM05D004315 ORTHO05D005089 1.0e-138 497.3 304 80.6
Lj2A329G54 Lonicera japonica HOM05D004315 ORTHO05D005089 1.0e-138 497.3 331 74.9
Rhsim13G0121900 Rhododendron simsii HOM05D004315 ORTHO05D005089 1.8e-138 496.5 386 65.5
Cpa.g.sc1123.2 Carica papaya HOM05D004315 ORTHO05D005089 3.9e-138 495.4 362 70.2
ClCG11G016660 Citrullus lanatus HOM05D004315 ORTHO05D005089 6.7e-138 494.6 417 63.1
CsaV3_4G007480 Cucumis sativus L. HOM05D004315 ORTHO05D005089 2.0e-137 493.0 356 69.7
CDE05G3605 Ceratophyllum demersum HOM05D003391 ORTHO05D005563 3.3e-137 492.3 363 67.8
Oeu015176.1 Olea europaea HOM05D004315 ORTHO05D005089 5.7e-137 491.5 344 71.2
Os07g0147700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 3.7e-136 488.8 357 70.0
Sabra16G0316700 Salix brachista HOM05D004315 ORTHO05D005089 1.1e-135 487.3 385 65.7
Oeu041105.1 Olea europaea HOM05D004315 ORTHO05D005089 3.4e-134 482.3 340 70.6
Lsat_1_v5_gn_1_91760 Lactuca sativa HOM05D004315 ORTHO05D005089 1.3e-133 480.3 371 64.2
SalBow8G0183 Salvia bowleyana HOM05D004315 ORTHO05D005089 6.5e-133 478.0 352 66.8
CANSAT35G0713 Cannabis sativa HOM05D004315 ORTHO05D005089 8.5e-133 477.6 353 68.0
Dinv10789 Davidia involucrata HOM05D004315 ORTHO05D005089 8.5e-133 477.6 339 72.6
Migut.M01899 Erythranthe guttata HOM05D004315 ORTHO05D005089 1.4e-132 476.9 340 69.4
Zm00001eb299940 Zea mays HOM05D004315 ORTHO05D005089 9.4e-132 474.2 330 72.1
Lj1A584G30 Lonicera japonica HOM05D004315 ORTHO05D005089 1.2e-131 473.8 345 71.0
SGA_v2.0_scaffold223G42867 Striga asiatica HOM05D004315 ORTHO05D005089 3.6e-131 472.2 379 63.1
Sp1g26410 Schrenkiella parvula HOM05D004315 ORTHO05D005089 1.0e-130 470.7 328 69.5
Aa31LG10G6590 Aethionema arabicum HOM05D004315 ORTHO05D005089 1.4e-130 470.3 372 63.7
Nitab4.5_0000076g0250 Nicotiana tabacum HOM05D004315 ORTHO05D005089 2.3e-130 469.5 335 70.4
Sabra11G0140700 Salix brachista HOM05D004315 ORTHO05D005089 2.3e-130 469.5 372 66.9
AT1G30540 Arabidopsis thaliana HOM05D004315 ORTHO05D005089 3.0e-130 469.2 357 65.0
Os09g0133700 Oryza sativa ssp. japonica HOM05D004315 ORTHO05D005089 8.8e-130 467.6 329 71.7
MSTRG.16294 Avicennia marina HOM05D004315 ORTHO05D005089 2.0e-129 466.5 352 66.8
CARHR029950 Cardamine hirsuta HOM05D004315 ORTHO05D005089 2.6e-129 466.1 357 65.0
Cc09_g07890 Coffea canephora HOM05D004315 ORTHO05D005089 2.6e-129 466.1 340 68.2
AL1G44580 Arabidopsis lyrata HOM05D004315 ORTHO05D005089 3.3e-129 465.7 357 65.0
BcaC05g27075 Brassica carinata HOM05D004315 ORTHO05D005089 5.7e-129 464.9 357 65.3
HPP92_005880 Vanilla planifolia HOM05D004315 ORTHO05D005089 5.7e-129 464.9 355 67.3
Carub.0001s2880 Capsella rubella HOM05D004315 ORTHO05D005089 9.7e-129 464.2 328 69.2
Thhalv10008046m.g Eutrema salsugineum HOM05D004315 ORTHO05D005089 2.2e-128 463.0 360 63.9
BcaB07g32690 Brassica carinata HOM05D004315 ORTHO05D005089 2.8e-128 462.6 358 65.6
BraA09t39115Z Brassica rapa HOM05D004315 ORTHO05D005089 2.8e-128 462.6 358 65.4
C05p29560 Brassica napus HOM05D004315 ORTHO05D005089 1.1e-127 460.7 358 65.1
BolC5t31687H Brassica oleracea HOM05D004315 ORTHO05D005089 1.4e-127 460.3 358 65.1
Actinidia12522 Actinidia chinensis HOM05D004315 ORTHO05D005089 1.8e-127 459.9 353 68.3
A09p35900 Brassica napus HOM05D004315 ORTHO05D005089 1.8e-127 459.9 358 64.8
Atru.chr10.841 Acer truncatum HOM05D004315 ORTHO05D005089 3.1e-127 459.1 339 69.3
Solyc02g023980.3 Solanum lycopersicum HOM05D004315 ORTHO05D005089 4.1e-127 458.8 332 69.9
DCAR_007839 Daucus carota HOM05D004315 ORTHO05D005089 3.5e-126 455.7 340 69.1
Zm00001eb261810 Zea mays HOM05D004315 ORTHO05D005089 4.5e-126 455.3 326 70.2
Manes.02G090600 Manihot esculenta HOM05D004315 ORTHO05D005089 5.0e-125 451.8 268 81.3
unitig_37.g12072 Utricularia gibba HOM05D004315 ORTHO05D005089 5.0e-125 451.8 341 66.0
CAN.G304.4 Capsicum annuum HOM05D004315 ORTHO05D005089 6.5e-125 451.4 332 68.7
SHI10516 Sapria himalayana HOM05D004315 ORTHO05D005089 8.5e-125 451.1 339 67.3
THA.LOC104798598 Tarenaya hassleriana HOM05D004315 ORTHO05D005089 1.1e-124 450.7 394 60.2
Duzib147G0966 Durio zibethinus HOM05D004315 ORTHO05D005089 2.5e-124 449.5 364 64.3
Nitab4.5_0011274g0010 Nicotiana tabacum HOM05D004315 ORTHO05D005089 4.7e-123 445.3 317 70.7
Peaxi162Scf00395g00318 Petunia axillaris HOM05D004315 ORTHO05D005089 8.0e-123 444.5 331 68.6
Ah.09g232250 Amaranthus hybridus HOM05D004315 ORTHO05D005089 1.7e-120 436.8 331 64.7
BcaB07g32692 Brassica carinata HOM05D004315 ORTHO05D005089 1.4e-119 433.7 362 63.0
PGSC0003DMG401028079 Solanum tuberosum HOM05D004315 ORTHO05D005089 7.0e-119 431.4 314 69.4
QL05p061983 Quercus lobata HOM05D004315 ORTHO05D005089 3.8e-117 425.6 533 46.7
CsaV3_4G032170 Cucumis sativus L. HOM05D004315 ORTHO05D005089 8.5e-117 424.5 362 62.7
Atru.chr6.2011 Acer truncatum HOM05D004315 ORTHO05D005089 8.0e-115 417.9 285 75.8
Glyma.14G033300 Glycine max HOM05D004315 ORTHO05D005089 2.3e-114 416.4 268 77.2
Sed0020733 Sechium edule HOM05D004315 ORTHO05D005089 4.1e-111 405.6 294 73.1
BcaB07g32666 Brassica carinata HOM05D004315 ORTHO05D005089 1.7e-101 373.6 360 57.2
Lsat_1_v5_gn_1_77721 Lactuca sativa HOM05D004315 ORTHO05D005089 3.3e-100 369.4 227 79.7
SMO334G0132 Selaginella moellendorffii HOM05D004315 ORTHO05D005089 4.3e-100 369.0 354 55.4
Mapoly0122s0046 Marchantia polymorpha HOM05D004315 ORTHO05D005089 4.7e-99 365.5 355 53.8
Haze_05864 Corylus avellana HOM05D004315 ORTHO05D005089 1.9e-92 343.6 280 63.9
Pp3c17_6390 Physcomitrium patens HOM05D004315 ORTHO05D005089 2.2e-88 330.1 285 58.2
Hma1.2p1_0067F.1_g036960 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 6.0e-86 322.0 200 80.5
Manes.14G123700 Manihot esculenta HOM05D004315 ORTHO05D005089 2.3e-85 320.1 250 64.4
Haze_05859 Corylus avellana HOM05D004315 ORTHO05D005089 1.9e-84 317.0 267 62.2
Actinidia01578 Actinidia chinensis HOM05D004315 ORTHO05D005089 5.6e-84 315.5 238 68.1
Sopen02g006690 Solanum pennellii HOM05D004315 ORTHO05D005089 9.5e-84 314.7 203 76.4
Sc10g0005420 Simmondsia chinensis HOM05D004315 ORTHO05D005089 1.1e-74 284.6 242 64.5
Haze_13622 Corylus avellana HOM05D004315 ORTHO05D005089 4.4e-73 279.3 162 83.3
CBR_g20100 Chara braunii HOM05D004315 ORTHO05D005089 4.6e-70 269.2 371 43.1
Cfa023542 Carpinus fangiana HOM05D004315 ORTHO05D005089 4.7e-67 259.2 197 69.0
QL05p062039 Quercus lobata HOM05D004315 ORTHO05D005089 1.5e-65 254.2 214 61.7
Actinidia33709 Actinidia chinensis HOM05D004315 ORTHO05D005089 2.3e-61 240.4 165 72.1
Hund21563 Selenicereus undatus HOM05D004315 ORTHO05D005089 2.3e-61 240.4 161 70.8
Hund21564 Selenicereus undatus HOM05D004315 ORTHO05D005089 9.0e-58 228.4 169 66.3
Zm00001eb058170 Zea mays HOM05D004315 ORTHO05D005089 1.3e-56 224.6 174 67.8
AagrBONN_evm.TU.Sc2ySwM_117.2193 Anthoceros agrestis HOM05D004315 ORTHO05D005089 3.3e-52 209.9 283 45.2
TPR.G1178 Trifolium pratense HOM05D003586 ORTHO05D004036 2.0e-49 200.7 197 54.3
PRCOL_00003495 Prasinoderma coloniale HOM05D004315 ORTHO05D005089 8.4e-48 195.3 329 41.3
Manes.01G131701 Manihot esculenta HOM05D004315 ORTHO05D005089 6.0e-46 189.1 156 62.8
Manes.01G131702 Manihot esculenta HOM05D004315 ORTHO05D005089 1.5e-41 174.5 116 74.1
SEGI_40766 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 1.5e-28 131.3 177 45.8
Cre17.g720528 Chlamydomonas reinhardtii HOM05D004315 ORTHO05D005089 1.4e-26 124.8 251 33.1
Pp3s34_420 Physcomitrium patens HOM05D000198 ORTHO05D309562 1.4e-26 124.8 300 34.0
QL04p059944 Quercus lobata HOM05D004315 ORTHO05D005089 2.6e-25 120.6 72 81.9
MCO07G054 Micromonas commoda HOM05D004315 ORTHO05D005089 4.5e-25 119.8 377 30.5
Atru.chr6.2012 Acer truncatum HOM05D004315 ORTHO05D005089 1.9e-23 114.4 67 76.1
SEGI_21833 Sequoiadendron giganteum HOM05D004315 ORTHO05D005089 5.5e-23 112.8 206 37.4
TAR624G0620 Trochodendron aralioides HOM05D004315 ORTHO05D005089 6.1e-22 109.4 63 77.8
Cfa023541 Carpinus fangiana HOM05D004315 ORTHO05D005089 3.1e-18 97.1 56 82.1
Hma1.2p1_0067F.1_g036930 Hydrangea macrophylla HOM05D004315 ORTHO05D005089 1.2e-17 95.1 57 78.9
DCAR_009744 Daucus carota HOM05D004315 ORTHO05D018839 1.4e-15 88.2 100 49.0
CDE04G1567 Ceratophyllum demersum HOM05D001307 ORTHO05D005089 1.7e-08 64.7 88 42.0
Cfa023540 Carpinus fangiana HOM05D000112 ORTHO05D001327 1.2e-06 58.5 35 71.4
Ah.03g146620 Amaranthus hybridus HOM05D004315 ORTHO05D005089 4.7e-06 56.6 57 49.1


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