Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g17080 Coffea canephora HOM05D000684 ORTHO05D008211 8.3e-80 300.4 165 100.0
Rhsim03G0180200 Rhododendron simsii HOM05D000684 ORTHO05D008211 6.4e-16 88.2 58 70.7
MELO3C001390.2 Cucumis melo HOM05D000684 ORTHO05D008211 7.1e-15 84.7 64 60.9
Potri.015G143200 Populus trichocarpa HOM05D000684 ORTHO05D008211 7.1e-15 84.7 58 63.8
QL09p014359 Quercus lobata HOM05D000684 ORTHO05D008211 7.1e-15 84.7 64 62.5
MELO3C004719.2 Cucumis melo HOM05D000684 ORTHO05D008211 1.6e-14 83.6 64 62.5
MD01G1199700 Malus domestica HOM05D000684 ORTHO05D008211 1.6e-14 83.6 61 63.9
Gohir.1Z049363 Gossypium hirsutum HOM05D000684 ORTHO05D008211 4.6e-14 82.0 64 59.4
Gohir.D09G170242 Gossypium hirsutum HOM05D000684 ORTHO05D008211 4.6e-14 82.0 64 59.4
Gorai.006G191600 Gossypium raimondii HOM05D000684 ORTHO05D008211 4.6e-14 82.0 64 59.4
Duzib068G0819 Durio zibethinus HOM05D000684 ORTHO05D008211 6.0e-14 81.6 66 59.1
Gohir.A09G175450 Gossypium hirsutum HOM05D000684 ORTHO05D008211 6.0e-14 81.6 64 59.4
HanXRQChr15g0495571 Helianthus annuus HOM05D000684 ORTHO05D008211 6.0e-14 81.6 64 54.7
Potri.012G140200 Populus trichocarpa HOM05D000684 ORTHO05D008211 6.0e-14 81.6 66 60.6
TAR629G2342 Trochodendron aralioides HOM05D000684 ORTHO05D008211 6.0e-14 81.6 58 65.5
Thecc.03G056400 Theobroma cacao HOM05D000684 ORTHO05D008211 7.9e-14 81.3 64 62.5
Dinv28449 Davidia involucrata HOM05D000684 ORTHO05D008211 1.0e-13 80.9 58 65.5
vmacro06687 Vaccinium macrocarpon HOM05D000684 ORTHO05D008211 1.0e-13 80.9 58 67.2
Ciclev10005222m.g Citrus clementina HOM05D000684 ORTHO05D008211 1.3e-13 80.5 64 57.8
MD07G1267700 Malus domestica HOM05D000684 ORTHO05D008211 1.3e-13 80.5 64 60.9
THA.LOC104798925 Tarenaya hassleriana HOM05D000684 ORTHO05D008211 3.0e-13 79.3 58 63.8
Atru.chr1.470 Acer truncatum HOM05D000684 ORTHO05D008211 3.9e-13 79.0 67 55.2
Aa31LG3G8630 Aethionema arabicum HOM05D000684 ORTHO05D008211 5.1e-13 78.6 64 56.2
Carub.0006s2148 Capsella rubella HOM05D000684 ORTHO05D008211 5.1e-13 78.6 58 62.1
HanXRQChr09g0253511 Helianthus annuus HOM05D000684 ORTHO05D008211 5.1e-13 78.6 65 50.8
PGR142G4059 Punica granatum HOM05D000684 ORTHO05D008211 5.1e-13 78.6 64 57.8
TWI14G0609 Tripterygium wilfordii HOM05D000684 ORTHO05D008211 5.1e-13 78.6 68 55.9
Cpa.g.sc107.44 Carica papaya HOM05D000684 ORTHO05D008211 6.7e-13 78.2 58 60.3
ECA232G2956 Erigeron canadensis HOM05D000684 ORTHO05D008211 6.7e-13 78.2 66 50.0
AL6G35010 Arabidopsis lyrata HOM05D000684 ORTHO05D008211 8.7e-13 77.8 58 62.1
AT5G23730 Arabidopsis thaliana HOM05D000684 ORTHO05D008211 8.7e-13 77.8 58 62.1
Cfa008312 Carpinus fangiana HOM05D000684 ORTHO05D008211 8.7e-13 77.8 64 57.8
Lsat_1_v5_gn_9_55081 Lactuca sativa HOM05D000684 ORTHO05D008211 1.1e-12 77.4 62 54.8
Sabra12G0105200 Salix brachista HOM05D000684 ORTHO05D008211 1.1e-12 77.4 58 62.1
Sabra15G0152900 Salix brachista HOM05D000684 ORTHO05D008211 1.1e-12 77.4 58 67.2
CiPaw.03G105600 Carya illinoinensis HOM05D000684 ORTHO05D008211 1.5e-12 77.0 60 63.3
FAN10G2450 Fragaria x ananassa HOM05D000684 ORTHO05D008211 1.5e-12 77.0 65 58.5
Prupe.2G293400 Prunus persica HOM05D000684 ORTHO05D008211 1.5e-12 77.0 68 57.4
Aa31LG11G3090 Aethionema arabicum HOM05D000684 ORTHO05D008211 1.9e-12 76.6 58 60.3
CSS0019145 Camellia sinensis var. sinensis HOM05D000684 ORTHO05D008211 2.5e-12 76.3 58 58.6
Eucgr.K00249 Eucalyptus grandis HOM05D000684 ORTHO05D008211 2.5e-12 76.3 64 54.7
FAN01G2843 Fragaria x ananassa HOM05D000684 ORTHO05D008211 2.5e-12 76.3 65 58.5
Manes.06G146500 Manihot esculenta HOM05D000684 ORTHO05D008211 2.5e-12 76.3 58 60.3
BolC9t53670H Brassica oleracea HOM05D000684 ORTHO05D008211 3.3e-12 75.9 58 62.1
Hma1.2p1_3335F.1_g335320 Hydrangea macrophylla HOM05D000684 ORTHO05D008211 3.3e-12 75.9 58 67.2
Thhalv10005519m.g Eutrema salsugineum HOM05D000684 ORTHO05D008211 4.3e-12 75.5 58 60.3
Lj1P996T30 Lonicera japonica HOM05D000684 ORTHO05D008211 4.3e-12 75.5 59 61.0
SalBow4G1597 Salvia bowleyana HOM05D000684 ORTHO05D008211 4.3e-12 75.5 58 58.6
Sp2g23490 Schrenkiella parvula HOM05D000684 ORTHO05D008211 4.3e-12 75.5 58 58.6
BcaB04g19850 Brassica carinata HOM05D000684 ORTHO05D008211 5.6e-12 75.1 58 60.3
BcaB04g19851 Brassica carinata HOM05D000684 ORTHO05D008211 5.6e-12 75.1 58 60.3
THA.LOC104800255 Tarenaya hassleriana HOM05D000684 ORTHO05D008211 5.6e-12 75.1 60 56.7
A09p06820 Brassica napus HOM05D000684 ORTHO05D008211 7.4e-12 74.7 58 60.3
BraA09t36328Z Brassica rapa HOM05D000684 ORTHO05D008211 7.4e-12 74.7 58 60.3
MBI18_g09767_MAGBIO Magnolia biondii HOM05D000684 ORTHO05D008211 7.4e-12 74.7 64 56.2
RcHm_v2.0_Chr1g0377161 Rosa chinensis HOM05D000684 ORTHO05D008211 7.4e-12 74.7 65 55.4
TWI39G0522 Tripterygium wilfordii HOM05D000684 ORTHO05D008211 7.4e-12 74.7 61 55.7
C09p07540 Brassica napus HOM05D000684 ORTHO05D008211 9.6e-12 74.3 58 60.3
Haze_13723 Corylus avellana HOM05D000684 ORTHO05D008211 9.6e-12 74.3 56 60.7
Nitab4.5_0002396g0010 Nicotiana tabacum HOM05D000684 ORTHO05D008211 1.3e-11 73.9 73 50.7
CARHR189800 Cardamine hirsuta HOM05D000684 ORTHO05D008211 1.6e-11 73.6 58 58.6
Nn1g01438 Nelumbo nucifera HOM05D000684 ORTHO05D008211 1.6e-11 73.6 64 56.2
FvH4_7g29370 Fragaria vesca HOM05D000684 ORTHO05D008211 2.1e-11 73.2 65 56.9
FAN06G2184 Fragaria x ananassa HOM05D000684 ORTHO05D008211 2.1e-11 73.2 65 56.9
FAN06G4762 Fragaria x ananassa HOM05D000684 ORTHO05D008211 2.1e-11 73.2 65 56.9
PGSC0003DMG400006033 Solanum tuberosum HOM05D000684 ORTHO05D008211 2.1e-11 73.2 71 52.1
Aqoxy7G00379 Aquilegia oxysepala HOM05D000684 ORTHO05D008211 2.8e-11 72.8 64 53.1
Oeu062752.1 Olea europaea HOM05D000684 ORTHO05D008211 3.7e-11 72.4 78 50.0
MSTRG.8454 Avicennia marina HOM05D000684 ORTHO05D008211 4.8e-11 72.0 59 61.0
Gohir.D02G121100 Gossypium hirsutum HOM05D000684 ORTHO05D008211 6.2e-11 71.6 58 58.6
Gorai.005G133100 Gossypium raimondii HOM05D000684 ORTHO05D008211 6.2e-11 71.6 58 58.6
Nn6g33528 Nelumbo nucifera HOM05D000684 ORTHO05D008211 6.2e-11 71.6 64 53.1
Nitab4.5_0004377g0010 Nicotiana tabacum HOM05D000684 ORTHO05D008211 6.2e-11 71.6 72 48.6
Actinidia32866 Actinidia chinensis HOM05D000684 ORTHO05D008211 1.1e-10 70.9 65 56.9
Sed0022159 Sechium edule HOM05D000684 ORTHO05D008211 3.1e-10 69.3 60 58.3
Solyc11g005190.3 Solanum lycopersicum HOM05D000684 ORTHO05D008211 3.1e-10 69.3 71 47.9
DCAR_018192 Daucus carota HOM05D000684 ORTHO05D008211 4.0e-10 68.9 56 60.7
Gohir.A03G092300 Gossypium hirsutum HOM05D000684 ORTHO05D008211 4.0e-10 68.9 58 56.9
Sp6g14500 Schrenkiella parvula HOM05D000684 ORTHO05D008211 4.0e-10 68.9 60 51.7
Migut.F00348 Erythranthe guttata HOM05D000684 ORTHO05D008211 5.3e-10 68.6 57 56.1
Peaxi162Scf00025g00283 Petunia axillaris HOM05D000684 ORTHO05D008211 5.3e-10 68.6 60 51.7
Sopen11g001190 Solanum pennellii HOM05D000684 ORTHO05D008211 6.9e-10 68.2 58 55.2
BcaB01g04194 Brassica carinata HOM05D000684 ORTHO05D008211 9.0e-10 67.8 64 51.6
A03p15770 Brassica napus HOM05D000684 ORTHO05D008211 9.0e-10 67.8 64 51.6
BolC3t14241H Brassica oleracea HOM05D000684 ORTHO05D008211 9.0e-10 67.8 64 51.6
BraA03t10867Z Brassica rapa HOM05D000684 ORTHO05D008211 9.0e-10 67.8 64 51.6
CDE02G2575 Ceratophyllum demersum HOM05D000684 ORTHO05D008211 9.0e-10 67.8 67 55.2
Thhalv10015606m.g Eutrema salsugineum HOM05D000684 ORTHO05D008211 9.0e-10 67.8 67 50.7
SalBow2G2597 Salvia bowleyana HOM05D000684 ORTHO05D008211 1.2e-09 67.4 60 60.0
unitig_749.g13761 Utricularia gibba HOM05D000684 ORTHO05D008211 1.2e-09 67.4 58 55.2
C03p18440 Brassica napus HOM05D000684 ORTHO05D008211 1.5e-09 67.0 60 51.7
BcaC01g06174 Brassica carinata HOM05D000684 ORTHO05D008211 2.6e-09 66.2 64 50.0
PSO782G0794 Papaver somniferum HOM05D000684 ORTHO05D008211 2.6e-09 66.2 67 53.7
CDE06G1688 Ceratophyllum demersum HOM05D000684 ORTHO05D008211 4.5e-09 65.5 67 50.7
PSO478G1968 Papaver somniferum HOM05D000684 ORTHO05D008211 7.6e-09 64.7 59 55.9
SGA_v2.0_scaffold60G21027 Striga asiatica HOM05D000684 ORTHO05D008211 4.9e-08 62.0 62 53.2
CARHR265220 Cardamine hirsuta HOM05D000684 ORTHO05D008211 8.4e-08 61.2 66 47.0
Migut.F01124 Erythranthe guttata HOM05D000684 ORTHO05D008211 1.1e-07 60.8 61 57.4
Carub.0008s1234 Capsella rubella HOM05D000684 ORTHO05D008211 2.5e-07 59.7 61 49.2
AL8G26630 Arabidopsis lyrata HOM05D000684 ORTHO05D008211 3.2e-07 59.3 61 50.8
AT5G52250 Arabidopsis thaliana HOM05D000684 ORTHO05D008211 1.2e-06 57.4 60 48.3
GSVIVG01028986001 Vitis vinifera HOM05D000684 ORTHO05D008211 6.0e-06 55.1 48 58.3


User provided reference genes

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