Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g15060 Coffea canephora HOM05D006238 ORTHO05D007458 3.9e-46 189.1 241 100.0
Gohir.A09G243100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 3.2e-32 142.9 234 91.5
Gohir.D09G243800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 3.2e-32 142.9 234 91.0
Gorai.006G267600 Gossypium raimondii HOM05D006238 ORTHO05D007458 3.2e-32 142.9 234 91.0
Medtr3g023830 Medicago truncatula HOM05D006238 ORTHO05D007458 3.2e-32 142.9 234 82.5
CSS0008812 Camellia sinensis var. sinensis HOM05D006238 ORTHO05D007458 5.5e-32 142.1 234 90.2
Cfa019307 Carpinus fangiana HOM05D006238 ORTHO05D007458 5.5e-32 142.1 234 91.5
Haze_07689 Corylus avellana HOM05D006238 ORTHO05D007458 5.5e-32 142.1 234 91.5
TPR.G12219 Trifolium pratense HOM05D006238 ORTHO05D007458 9.4e-32 141.4 234 83.3
Lj1g0017158 Lotus japonicus HOM05D006238 ORTHO05D007458 1.2e-31 141.0 234 85.0
Duzib205G0643 Durio zibethinus HOM05D006238 ORTHO05D007458 1.6e-31 140.6 234 89.7
Oeu038367.1 Olea europaea HOM05D006238 ORTHO05D007458 2.7e-31 139.8 234 91.5
Glyma.06G201600 Glycine max HOM05D006238 ORTHO05D007458 3.6e-31 139.4 234 84.6
QL10p018767 Quercus lobata HOM05D006238 ORTHO05D007458 3.6e-31 139.4 233 91.8
QL93p0191_0017 Quercus lobata HOM05D006238 ORTHO05D007458 3.6e-31 139.4 233 91.8
arahy.Tifrunner.gnm1.ann1.G7J9WL Arachis hypogaea HOM05D006238 ORTHO05D007458 6.1e-31 138.7 232 88.8
arahy.Tifrunner.gnm1.ann1.XMW6VU Arachis hypogaea HOM05D006238 ORTHO05D007458 6.1e-31 138.7 232 82.3
Glyma.04G164100 Glycine max HOM05D006238 ORTHO05D007458 6.1e-31 138.7 234 82.9
Potri.015G048800 Populus trichocarpa HOM05D006238 ORTHO05D007458 7.9e-31 138.3 234 87.6
Psat5g211960 Pisum sativum HOM05D006238 ORTHO05D007458 1.0e-30 137.9 234 90.6
CiPaw.11G050500 Carya illinoinensis HOM05D006238 ORTHO05D007458 1.4e-30 137.5 234 90.2
Actinidia35026 Actinidia chinensis HOM05D006238 ORTHO05D007458 1.8e-30 137.1 234 89.7
GSVIVG01007912001 Vitis vinifera HOM05D006238 ORTHO05D007458 3.0e-30 136.3 232 90.5
Ca_13804_v3 Cicer arietinum L. HOM05D006238 ORTHO05D007458 5.1e-30 135.6 234 83.8
Migut.I00441 Erythranthe guttata HOM05D006238 ORTHO05D007458 6.7e-30 135.2 234 89.3
RcHm_v2.0_Chr7g0182671 Rosa chinensis HOM05D006238 ORTHO05D007458 6.7e-30 135.2 235 89.4
MD14G1209200 Malus domestica HOM05D006238 ORTHO05D007458 8.8e-30 134.8 237 89.5
Prupe.5G201600 Prunus persica HOM05D006238 ORTHO05D007458 8.8e-30 134.8 235 89.4
FvH4_5g14250 Fragaria vesca HOM05D006238 ORTHO05D007458 1.1e-29 134.4 232 90.1
Thecc.03G097700 Theobroma cacao HOM05D006238 ORTHO05D007458 1.5e-29 134.0 234 88.9
Atru.chr9.382 Acer truncatum HOM05D006238 ORTHO05D007458 2.0e-29 133.7 234 88.9
FAN13G1324 Fragaria x ananassa HOM05D000113 ORTHO05D002571 2.6e-29 133.3 227 92.1
Sed0022301 Sechium edule HOM05D006238 ORTHO05D007458 3.3e-29 132.9 234 89.3
Ciclev10021749m.g Citrus clementina HOM05D006238 ORTHO05D007458 4.4e-29 132.5 232 89.7
Migut.L00004 Erythranthe guttata HOM05D006238 ORTHO05D007458 4.4e-29 132.5 234 88.9
Eucgr.K02503 Eucalyptus grandis HOM05D006238 ORTHO05D007458 5.7e-29 132.1 234 87.6
Lalb_Chr08g0238951 Lupinus albus HOM05D006238 ORTHO05D007458 5.7e-29 132.1 234 82.9
CANSAT80G2720 Cannabis sativa HOM05D006238 ORTHO05D007458 9.7e-29 131.3 234 89.3
Gohir.A12G181100 Gossypium hirsutum HOM05D006238 ORTHO05D007458 1.3e-28 131.0 230 89.6
FAN08G1023 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.7e-28 130.6 227 90.7
Lsat_1_v5_gn_4_110280 Lactuca sativa HOM05D006238 ORTHO05D007458 1.7e-28 130.6 234 89.7
PGR044G1626 Punica granatum HOM05D006238 ORTHO05D007458 1.7e-28 130.6 234 88.9
Sopen03g034410 Solanum pennellii HOM05D006238 ORTHO05D007458 1.7e-28 130.6 234 88.9
ECA232G0231 Erigeron canadensis HOM05D000954 ORTHO05D000822 2.8e-28 129.8 234 89.3
Solyc03g115410.3 Solanum lycopersicum HOM05D006238 ORTHO05D007458 2.8e-28 129.8 234 88.9
ECA247G0665 Erigeron canadensis HOM05D000006 ORTHO05D007458 3.7e-28 129.4 234 87.2
Gohir.D12G183800 Gossypium hirsutum HOM05D006238 ORTHO05D007458 3.7e-28 129.4 230 89.1
Gorai.008G197100 Gossypium raimondii HOM05D006238 ORTHO05D007458 4.8e-28 129.0 230 89.1
TWI81G0503 Tripterygium wilfordii HOM05D006238 ORTHO05D007458 4.8e-28 129.0 234 87.2
CAN.G479.27 Capsicum annuum HOM05D006238 ORTHO05D007458 1.1e-27 127.9 234 88.5
DCAR_016594 Daucus carota HOM05D006238 ORTHO05D007458 1.4e-27 127.5 228 90.4
Aqoxy3G00445 Aquilegia oxysepala HOM05D006238 ORTHO05D007458 1.8e-27 127.1 234 87.6
MSTRG.22972 Avicennia marina HOM05D006238 ORTHO05D007458 1.8e-27 127.1 234 88.0
Nitab4.5_0004284g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 2.4e-27 126.7 229 62.9
SGA_v2.0_scaffold28G11764 Striga asiatica HOM05D006238 ORTHO05D007458 3.1e-27 126.3 228 82.9
COL.COLO4_22216 Corchorus olitorius HOM05D006238 ORTHO05D007458 6.9e-27 125.2 234 88.5
Nitab4.5_0001410g0100 Nicotiana tabacum HOM05D006238 ORTHO05D007458 9.1e-27 124.8 236 88.6
MELO3C017212.2 Cucumis melo HOM05D006238 ORTHO05D007458 1.2e-26 124.4 234 87.2
CsaV3_1G002770 Cucumis sativus L. HOM05D006238 ORTHO05D007458 1.2e-26 124.4 234 87.2
Sopen12g019730 Solanum pennellii HOM05D006238 ORTHO05D007458 1.2e-26 124.4 234 83.8
EL10Ac5g11104 Beta vulgaris HOM05D006238 ORTHO05D007458 1.5e-26 124.0 233 86.7
ATR0064G078 Amborella trichopoda HOM05D006238 ORTHO05D007458 2.0e-26 123.6 236 86.4
HanXRQChr02g0042551 Helianthus annuus HOM05D006238 ORTHO05D007458 2.0e-26 123.6 237 87.3
Solyc12g040320.2 Solanum lycopersicum HOM05D006238 ORTHO05D007458 2.0e-26 123.6 234 86.8
ClCG06G015770 Citrullus lanatus HOM05D006238 ORTHO05D007458 2.6e-26 123.2 234 87.6
THA.LOC104801299 Tarenaya hassleriana HOM05D006238 ORTHO05D007458 2.6e-26 123.2 232 87.1
AL6G18240 Arabidopsis lyrata HOM05D006238 ORTHO05D007458 3.4e-26 122.9 235 85.5
BcaB01g05644 Brassica carinata HOM05D006238 ORTHO05D007458 5.9e-26 122.1 235 86.4
BolC3t12934H Brassica oleracea HOM05D006238 ORTHO05D007458 5.9e-26 122.1 235 86.4
Thhalv10014418m.g Eutrema salsugineum HOM05D006238 ORTHO05D007458 5.9e-26 122.1 235 85.5
Sp6g35050 Schrenkiella parvula HOM05D006238 ORTHO05D007458 5.9e-26 122.1 235 85.5
BcaB05g21597 Brassica carinata HOM05D006238 ORTHO05D007458 7.7e-26 121.7 235 85.1
BcaNung04721 Brassica carinata HOM05D006238 ORTHO05D007458 1.0e-25 121.3 235 84.3
A03p03520 Brassica napus HOM05D006238 ORTHO05D007458 1.0e-25 121.3 235 86.0
C02p03310 Brassica napus HOM05D006238 ORTHO05D007458 1.0e-25 121.3 235 84.3
BolC2t06295H Brassica oleracea HOM05D006238 ORTHO05D007458 1.0e-25 121.3 235 84.3
BraA02t04934Z Brassica rapa HOM05D006238 ORTHO05D007458 1.0e-25 121.3 235 84.3
BraA03t09702Z Brassica rapa HOM05D006238 ORTHO05D007458 1.0e-25 121.3 235 86.0
C03p03970 Brassica napus HOM05D006238 ORTHO05D007458 1.3e-25 120.9 232 87.1
Nn4g23380 Nelumbo nucifera HOM05D006238 ORTHO05D007458 1.3e-25 120.9 234 35.5
BcaB01g05687 Brassica carinata HOM05D006238 ORTHO05D007458 2.2e-25 120.2 235 84.7
CARHR205290 Cardamine hirsuta HOM05D006238 ORTHO05D007458 2.2e-25 120.2 235 85.1
Cpa.g.sc94.12 Carica papaya HOM05D006238 ORTHO05D007458 2.2e-25 120.2 63 87.3
Hund02602 Selenicereus undatus HOM05D006238 ORTHO05D007458 2.2e-25 120.2 233 85.8
Carub.0006s0680 Capsella rubella HOM05D006238 ORTHO05D007458 2.9e-25 119.8 235 84.7
Lsat_1_v5_gn_1_13640 Lactuca sativa HOM05D006238 ORTHO05D007458 2.9e-25 119.8 224 90.2
PSO478G4259 Papaver somniferum HOM05D006238 ORTHO05D007458 2.9e-25 119.8 232 86.2
AT5G07910 Arabidopsis thaliana HOM05D006238 ORTHO05D007458 3.8e-25 119.4 235 84.7
BcaB01g05688 Brassica carinata HOM05D006238 ORTHO05D007458 3.8e-25 119.4 235 84.7
Dinv38791 Davidia involucrata HOM05D006238 ORTHO05D007458 6.5e-25 118.6 64 87.5
PSO017G1619 Papaver somniferum HOM05D006238 ORTHO05D007458 6.5e-25 118.6 232 86.2
Aa31LG3G18600 Aethionema arabicum HOM05D006238 ORTHO05D007458 1.9e-24 117.1 258 66.3
HanXRQChr14g0439161 Helianthus annuus HOM05D006238 ORTHO05D007458 1.9e-24 117.1 234 86.8
BcaNung04724 Brassica carinata HOM05D006238 ORTHO05D007458 3.2e-24 116.3 235 85.1
Phvul.009G193701 Phaseolus vulgaris HOM05D006238 ORTHO05D007458 5.5e-24 115.5 63 87.3
MD06G1200000 Malus domestica HOM05D006238 ORTHO05D007458 7.2e-24 115.2 63 85.7
Nitab4.5_0001961g0050 Nicotiana tabacum HOM05D006238 ORTHO05D007458 3.6e-23 112.8 62 85.5
Nitab4.5_0005160g0060 Nicotiana tabacum HOM05D006238 ORTHO05D007458 3.6e-23 112.8 62 85.5
QL05p088277 Quercus lobata HOM05D003602 ORTHO05D007458 6.1e-23 112.1 62 85.5
PSO384G2798 Papaver somniferum HOM05D006238 ORTHO05D007458 7.9e-23 111.7 234 85.5
PGSC0003DMG401024548 Solanum tuberosum HOM05D006238 ORTHO05D007458 1.0e-22 111.3 63 84.1
SalBow5G1318 Salvia bowleyana HOM05D006238 ORTHO05D007458 2.3e-22 110.2 64 81.2
Manes.06G087000 Manihot esculenta HOM05D006238 ORTHO05D007458 3.0e-22 109.8 63 81.0
Peaxi162Scf00106g00109 Petunia axillaris HOM05D006238 ORTHO05D007458 3.0e-22 109.8 63 84.1
PGSC0003DMG400005395 Solanum tuberosum HOM05D006238 ORTHO05D007458 3.0e-22 109.8 63 82.5
PSO339G0502 Papaver somniferum HOM05D006238 ORTHO05D007458 6.7e-22 108.6 234 85.0
HPP92_013436 Vanilla planifolia HOM05D001674 ORTHO05D008374 4.1e-19 99.4 234 81.6
HPP92_027112 Vanilla planifolia HOM05D006238 ORTHO05D007458 2.6e-18 96.7 63 71.4
AagrBONN_evm.TU.Sc2ySwM_228.2402 Anthoceros agrestis HOM05D006238 ORTHO05D007458 4.5e-18 95.9 63 66.7
Hund26925 Selenicereus undatus HOM05D006238 ORTHO05D007458 1.7e-17 94.0 66 69.7
Dinv10691 Davidia involucrata HOM05D000773 ORTHO05D000588 8.5e-17 91.7 207 89.9
Zm00001eb008470 Zea mays HOM05D006238 ORTHO05D007458 2.7e-15 86.7 52 76.9
Pp3c19_5770 Physcomitrium patens HOM05D006238 ORTHO05D007458 7.5e-13 78.6 63 54.0
SMO364G0258 Selaginella moellendorffii HOM05D006238 ORTHO05D007458 4.8e-12 75.9 60 51.7
CBR_g18689 Chara braunii HOM05D006238 ORTHO05D007458 2.4e-11 73.6 59 52.5
Oeu062485.1 Olea europaea HOM05D006238 ORTHO05D007458 2.4e-11 73.6 47 76.6
Sabra15G0078500 Salix brachista HOM05D006238 ORTHO05D007458 5.3e-11 72.4 43 76.7
Cpa.g.sc94.13 Carica papaya HOM05D006238 ORTHO05D007458 9.1e-11 71.6 47 70.2
AUR62008501 Chenopodium quinoa HOM05D006238 ORTHO05D007458 1.6e-10 70.9 47 68.1
Rhsim12G0152200 Rhododendron simsii HOM05D006238 ORTHO05D007458 1.6e-10 70.9 39 87.2
vmacro16511 Vaccinium macrocarpon HOM05D006238 ORTHO05D007458 1.6e-10 70.9 39 87.2
Peaxi162Scf00201g00133 Petunia axillaris HOM05D006238 ORTHO05D007458 7.7e-10 68.6 235 63.4
Sc10g0009770 Simmondsia chinensis HOM05D006238 ORTHO05D007458 1.7e-09 67.4 45 71.1
Cre12.g503600 Chlamydomonas reinhardtii HOM05D006238 ORTHO05D007458 5.0e-09 65.9 61 47.5
AUR62021591 Chenopodium quinoa HOM05D006238 ORTHO05D007458 1.1e-08 64.7 57 57.9
Mapoly0043s0125 Marchantia polymorpha HOM05D006395 ORTHO05D007894 1.5e-08 64.3 60 45.0
AagrBONN_evm.TU.Sc2ySwM_228.749 Anthoceros agrestis HOM05D006395 ORTHO05D007894 5.5e-08 62.4 60 46.7
QL10p018168 Quercus lobata HOM05D006238 ORTHO05D007458 5.5e-08 62.4 41 70.7
QL93p0869_0056 Quercus lobata HOM05D000176 ORTHO05D000106 7.2e-08 62.0 31 93.5
SMO198G0061 Selaginella moellendorffii HOM05D006395 ORTHO05D007894 7.2e-08 62.0 61 44.3
CBR_g52452 Chara braunii HOM05D006395 ORTHO05D007458 6.1e-07 58.9 60 41.7
PRCOL_00001761 Prasinoderma coloniale HOM05D006238 ORTHO05D007458 1.8e-06 57.4 62 38.7
MCO07G688 Micromonas commoda HOM05D006238 ORTHO05D007458 4.0e-06 56.2 62 38.7
Potri.001G280500 Populus trichocarpa HOM05D006395 ORTHO05D007894 4.0e-06 56.2 60 45.0
MBI15_g36485_MAGBIO Magnolia biondii HOM05D006395 ORTHO05D007894 8.8e-06 55.1 62 41.9


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