Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g06350 Coffea canephora HOM05D006707 ORTHO05D008243 1.7e-222 776.5 725 100.0
Nitab4.5_0003968g0010 Nicotiana tabacum HOM05D006707 ORTHO05D008243 3.0e-89 334.0 702 64.0
Nitab4.5_0001456g0170 Nicotiana tabacum HOM05D006707 ORTHO05D008243 9.5e-88 328.9 692 71.8
Solyc03g118790.3 Solanum lycopersicum HOM05D006707 ORTHO05D008243 8.1e-87 325.9 713 62.7
Peaxi162Scf00683g00048 Petunia axillaris HOM05D006707 ORTHO05D008243 1.7e-81 308.1 490 48.8
Prupe.5G232400 Prunus persica HOM05D006707 ORTHO05D008243 6.6e-81 306.2 486 66.5
PGSC0003DMG400005747 Solanum tuberosum HOM05D006707 ORTHO05D008243 1.5e-80 305.1 670 63.7
COL.COLO4_35387 Corchorus olitorius HOM05D006707 ORTHO05D008243 6.0e-74 283.1 476 64.7
Sopen03g037740 Solanum pennellii HOM05D006707 ORTHO05D008243 7.8e-74 282.7 641 64.6
CiPaw.15G142400 Carya illinoinensis HOM05D006707 ORTHO05D008243 3.9e-73 280.4 483 64.8
Aqoxy3G00090 Aquilegia oxysepala HOM05D006707 ORTHO05D008243 1.6e-71 275.0 424 68.2
TWI81G0630 Tripterygium wilfordii HOM05D006707 ORTHO05D008243 1.1e-70 272.3 478 63.6
CAN.G1129.54 Capsicum annuum HOM05D006707 ORTHO05D008243 9.0e-70 269.2 495 50.7
Duzib205G0649 Durio zibethinus HOM05D006707 ORTHO05D008243 1.2e-69 268.9 441 63.5
CARHR093330 Cardamine hirsuta HOM05D006707 ORTHO05D008243 4.9e-68 263.5 429 49.4
QL11p014448 Quercus lobata HOM05D006707 ORTHO05D008243 1.9e-67 261.5 452 61.7
TAR622G1063 Trochodendron aralioides HOM05D006707 ORTHO05D008243 3.9e-65 253.8 426 56.3
Dinv07298 Davidia involucrata HOM05D006707 ORTHO05D008243 1.1e-64 252.3 315 60.6
Lsat_1_v5_gn_6_99620 Lactuca sativa HOM05D006707 ORTHO05D008243 2.5e-64 251.1 448 59.4
Thecc.03G054200 Theobroma cacao HOM05D006707 ORTHO05D008243 2.5e-64 251.1 498 58.4
Dinv27614 Davidia involucrata HOM05D006707 ORTHO05D008243 5.6e-64 250.0 262 67.2
HPP92_007817 Vanilla planifolia HOM05D006707 ORTHO05D008243 4.8e-63 246.9 442 38.2
Lj5P156T67 Lonicera japonica HOM05D006707 ORTHO05D008243 8.1e-63 246.1 313 58.5
Cfa019000 Carpinus fangiana HOM05D006707 ORTHO05D008243 2.0e-61 241.5 268 68.3
EL10Ac3g06722 Beta vulgaris HOM05D006707 ORTHO05D008243 7.6e-61 239.6 440 63.9
GSVIVG01016661001 Vitis vinifera HOM05D006707 ORTHO05D008243 9.9e-61 239.2 257 67.3
RhsimUnG0239000 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.7e-60 238.4 305 59.7
QL11p013929 Quercus lobata HOM05D006707 ORTHO05D008243 1.4e-59 235.3 452 59.1
Sabra15G0069900 Salix brachista HOM05D006707 ORTHO05D008243 1.4e-59 235.3 485 60.0
CANSAT11G1044 Cannabis sativa HOM05D006707 ORTHO05D008243 1.9e-59 235.0 388 71.1
Nn4g24204 Nelumbo nucifera HOM05D006707 ORTHO05D008243 2.4e-59 234.6 257 66.5
MSTRG.16972 Avicennia marina HOM05D006707 ORTHO05D008243 7.1e-59 233.0 310 60.6
AUR62035349 Chenopodium quinoa HOM05D006707 ORTHO05D008243 9.3e-59 232.6 468 61.5
Psat3g124000 Pisum sativum HOM05D006707 ORTHO05D008243 1.2e-58 232.3 393 58.8
MD06G1231100 Malus domestica HOM05D006707 ORTHO05D008243 2.7e-58 231.1 312 55.4
Oeu010709.1 Olea europaea HOM05D006707 ORTHO05D008243 2.7e-58 231.1 318 59.1
RhsimUnG0220600 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.0e-57 229.2 258 65.5
Manes.06G007500 Manihot esculenta HOM05D006707 ORTHO05D008243 1.3e-57 228.8 300 58.7
Haze_21123 Corylus avellana HOM05D006707 ORTHO05D008243 1.8e-57 228.4 319 59.6
Sed0000825 Sechium edule HOM05D006707 ORTHO05D008243 1.9e-56 224.9 433 58.9
Potri.015G039300 Populus trichocarpa HOM05D006707 ORTHO05D008243 2.5e-56 224.6 311 57.6
Rhsim03G0042300 Rhododendron simsii HOM05D006707 ORTHO05D008243 3.3e-56 224.2 296 59.1
RcHm_v2.0_Chr7g0178541 Rosa chinensis HOM05D006707 ORTHO05D008243 4.3e-56 223.8 313 58.1
Lj5A157G52 Lonicera japonica HOM05D006707 ORTHO05D008243 5.6e-56 223.4 410 66.8
Actinidia25143 Actinidia chinensis HOM05D006707 ORTHO05D008243 7.4e-56 223.0 258 64.0
CsaV3_1G004300 Cucumis sativus L. HOM05D006707 ORTHO05D008243 1.3e-55 222.2 433 64.4
FAN08G3326 Fragaria x ananassa HOM05D006707 ORTHO05D008243 1.6e-55 221.9 312 55.4
Ah.04g153500 Amaranthus hybridus HOM05D006707 ORTHO05D008243 2.1e-55 221.5 428 65.2
Ca_07699_v3 Cicer arietinum L. HOM05D006707 ORTHO05D000099 2.1e-55 221.5 388 52.1
FvH4_5g17250 Fragaria vesca HOM05D006707 ORTHO05D008243 2.1e-55 221.5 314 55.1
FAN18G2052 Fragaria x ananassa HOM05D006707 ORTHO05D008243 2.1e-55 221.5 314 55.1
Sabra15G0070700 Salix brachista HOM05D006707 ORTHO05D008243 4.8e-55 220.3 312 56.7
Sabra15G0057600 Salix brachista HOM05D006707 ORTHO05D008243 8.1e-55 219.5 312 56.4
SalBow6G7169 Salvia bowleyana HOM05D006707 ORTHO05D008243 8.1e-55 219.5 627 56.8
ClCG06G014360 Citrullus lanatus HOM05D006707 ORTHO05D008243 3.1e-54 217.6 474 60.3
Migut.I00309 Erythranthe guttata HOM05D006707 ORTHO05D008243 4.0e-54 217.2 308 56.2
Sabra15G0038500 Salix brachista HOM05D006707 ORTHO05D008243 4.0e-54 217.2 258 64.0
DCAR_014733 Daucus carota HOM05D006707 ORTHO05D008243 6.9e-54 216.5 270 59.3
Hund22248 Selenicereus undatus HOM05D006707 ORTHO05D008243 4.5e-53 213.8 318 57.9
PSO478G5041 Papaver somniferum HOM05D006707 ORTHO05D008243 1.3e-52 212.2 270 61.9
AUR62035893 Chenopodium quinoa HOM05D006707 ORTHO05D008243 5.5e-51 206.8 297 55.2
Lalb_Chr04g0260761 Lupinus albus HOM05D006707 ORTHO05D008243 1.6e-50 205.3 389 64.5
Eucgr.K02270 Eucalyptus grandis HOM05D006707 ORTHO05D008243 2.7e-50 204.5 642 53.9
HanXRQChr10g0279071 Helianthus annuus HOM05D006707 ORTHO05D008243 3.5e-50 204.1 420 61.0
SGA_v2.0_scaffold192G40603 Striga asiatica HOM05D006707 ORTHO05D008243 1.0e-49 202.6 473 59.6
Sc10g0004790 Simmondsia chinensis HOM05D006707 ORTHO05D008243 1.8e-49 201.8 268 60.1
Thhalv10020183m.g Eutrema salsugineum HOM05D006707 ORTHO05D008243 3.3e-48 197.6 258 61.2
vmacro07812 Vaccinium macrocarpon HOM05D006707 ORTHO05D008243 3.3e-48 197.6 421 43.5
AL3G31170 Arabidopsis lyrata HOM05D006707 ORTHO05D008243 1.6e-47 195.3 258 60.9
Carub.0003s1773 Capsella rubella HOM05D006707 ORTHO05D008243 2.1e-47 194.9 258 60.1
Aa31LG8G4870 Aethionema arabicum HOM05D006707 ORTHO05D008243 2.8e-47 194.5 296 54.7
AT3G18020 Arabidopsis thaliana HOM05D006707 ORTHO05D008243 2.8e-47 194.5 258 59.7
Sp3g16130 Schrenkiella parvula HOM05D006707 ORTHO05D008243 1.1e-46 192.6 258 61.2
BcaB06g25867 Brassica carinata HOM05D006707 ORTHO05D008243 4.0e-46 190.7 323 52.9
A05p31810 Brassica napus HOM05D006707 ORTHO05D008243 6.9e-46 189.9 258 59.3
BraA05t22012Z Brassica rapa HOM05D006707 ORTHO05D008243 6.9e-46 189.9 258 59.7
BcaC05g28725 Brassica carinata HOM05D006707 ORTHO05D008243 2.0e-45 188.3 258 59.3
BolC5t33562H Brassica oleracea HOM05D006707 ORTHO05D008243 2.0e-45 188.3 258 59.3
C05p48280 Brassica napus HOM05D006707 ORTHO05D008243 1.3e-44 185.7 258 59.7
THA.LOC104820351 Tarenaya hassleriana HOM05D006707 ORTHO05D008243 3.8e-44 184.1 289 55.7
Medtr7g070420 Medicago truncatula HOM05D006707 ORTHO05D008243 4.2e-43 180.6 388 53.1
Cpa.g.sc3.405 Carica papaya HOM05D006707 ORTHO05D008243 2.3e-41 174.9 237 59.1
PSO017G3187 Papaver somniferum HOM05D006707 ORTHO05D008243 1.9e-35 155.2 155 52.9
Phvul.010G093200 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 1.9e-35 155.2 217 64.1
Atru.BG.186.p Acer truncatum HOM05D006707 ORTHO05D008243 4.2e-35 154.1 219 66.2
VMungo1383G0390 Vigna mungo HOM05D006707 ORTHO05D008243 9.4e-35 152.9 217 62.7
Glyma.18G207800 Glycine max HOM05D006707 ORTHO05D008243 7.9e-34 149.8 217 62.7
PGR044G0521 Punica granatum HOM05D006707 ORTHO05D008243 1.1e-32 146.0 233 57.1
TPR.G37093 Trifolium pratense HOM05D006707 ORTHO05D008243 2.0e-32 145.2 221 58.4
Lj1g0019371 Lotus japonicus HOM05D006707 ORTHO05D008243 3.7e-31 141.0 217 57.6
CDE07G1516 Ceratophyllum demersum HOM05D006707 ORTHO05D008243 1.8e-30 138.7 413 48.9
TPR.G35815 Trifolium pratense HOM05D006707 ORTHO05D008243 1.5e-29 135.6 212 59.0
Haze_18837 Corylus avellana HOM05D006707 ORTHO05D008243 1.7e-28 132.1 135 50.4
ATR0564G450 Amborella trichopoda HOM05D006707 ORTHO05D008243 3.8e-28 131.0 293 50.2
Rhsim03G0043000 Rhododendron simsii HOM05D006707 ORTHO05D008243 1.4e-27 129.0 228 71.1
ECA246G2801 Erigeron canadensis HOM05D006707 ORTHO05D008243 2.5e-27 128.3 228 53.9
arahy.Tifrunner.gnm1.ann1.72MQAV Arachis hypogaea HOM05D000449 ORTHO05D008243 5.5e-27 127.1 217 56.7
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 2.1e-26 125.2 217 56.7
arahy.Tifrunner.gnm1.ann1.U18B68 Arachis hypogaea HOM05D000449 ORTHO05D008243 1.0e-25 122.9 217 56.2
Os07g0674300 Oryza sativa ssp. japonica HOM05D006707 ORTHO05D008243 2.0e-24 118.6 408 27.7
SEGI_24072 Sequoiadendron giganteum HOM05D006707 ORTHO05D008243 3.3e-24 117.9 274 50.0
Lj5P156T63 Lonicera japonica HOM05D006707 ORTHO05D008243 1.7e-23 115.5 77 71.4
HanXRQChr10g0277831 Helianthus annuus HOM05D006707 ORTHO05D008243 1.4e-22 112.5 353 46.5
QL11p014441 Quercus lobata HOM05D006707 ORTHO05D008243 2.0e-21 108.6 167 44.9
Zm00001eb111370 Zea mays HOM05D006707 ORTHO05D008243 6.5e-20 103.6 404 24.3
arahy.Tifrunner.gnm1.ann1.1F7K7B Arachis hypogaea HOM05D006707 ORTHO05D008243 9.4e-19 99.8 82 61.0
BraA05t22010Z Brassica rapa HOM05D006707 ORTHO05D008243 2.0e-16 92.0 73 61.6
CSS0017365 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 2.0e-13 82.0 58 70.7
CSS0026236 Camellia sinensis var. sinensis HOM05D006707 ORTHO05D008243 2.0e-13 82.0 58 70.7
RhsimUnG0220500 Rhododendron simsii HOM05D006707 ORTHO05D008243 4.5e-13 80.9 54 64.8
Ciclev10024364m.g Citrus clementina HOM05D006707 ORTHO05D008243 5.9e-13 80.5 60 63.3
FAN13G2143 Fragaria x ananassa HOM05D006707 ORTHO05D008243 5.5e-11 73.9 230 29.1
PSO017G4261 Papaver somniferum HOM05D006707 ORTHO05D008243 1.8e-09 68.9 47 66.0
MELO3C017354.2 Cucumis melo HOM05D006707 ORTHO05D008243 9.8e-08 63.2 41 68.3
Phvul.008G091500 Phaseolus vulgaris HOM05D006707 ORTHO05D008243 3.7e-07 61.2 49 65.3


User provided reference genes

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