Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g02560 Coffea canephora HOM05D005013 ORTHO05D006005 0.0e+00 1152.5 707 100.0
Sopen03g039850 Solanum pennellii HOM05D005013 ORTHO05D006005 1.1e-210 737.3 527 74.0
Solyc03g121020.3 Solanum lycopersicum HOM05D005013 ORTHO05D006005 3.3e-210 735.7 535 73.5
CAN.G1143.13 Capsicum annuum HOM05D005013 ORTHO05D006005 6.2e-209 731.5 713 69.1
CSS0033602 Camellia sinensis var. sinensis HOM05D005013 ORTHO05D006005 1.1e-208 730.7 747 64.8
vmacro18853 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 7.1e-205 718.0 717 66.2
Nitab4.5_0006467g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 1.9e-202 709.9 552 70.5
Peaxi162Scf00038g01028 Petunia axillaris HOM05D005013 ORTHO05D006005 1.1e-194 684.1 490 75.1
Hma1.2p1_1232F.1_g268910 Hydrangea macrophylla HOM05D005013 ORTHO05D006005 2.1e-193 679.9 505 72.9
MD17G1184000 Malus domestica HOM05D005013 ORTHO05D006005 5.8e-191 671.8 737 60.9
Ciclev10025066m.g Citrus clementina HOM05D005013 ORTHO05D006005 1.3e-190 670.6 517 70.0
TAR633G2449 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.7e-190 670.2 536 69.2
Lalb_Chr22g0351551 Lupinus albus HOM05D005013 ORTHO05D006005 1.9e-189 666.8 503 69.6
MD09G1202900 Malus domestica HOM05D005013 ORTHO05D006005 1.9e-189 666.8 741 60.9
Lj9C512T10 Lonicera japonica HOM05D005013 ORTHO05D006005 2.1e-188 663.3 771 59.0
Nitab4.5_0006902g0030 Nicotiana tabacum HOM05D005013 ORTHO05D006005 4.6e-188 662.1 453 74.8
VMungo0331G0134 Vigna mungo HOM05D005013 ORTHO05D006005 1.8e-187 660.2 517 69.6
MSTRG.4752 Avicennia marina HOM05D005013 ORTHO05D006005 3.0e-187 659.4 535 67.1
Duzib235G0505 Durio zibethinus HOM05D005013 ORTHO05D006005 6.7e-187 658.3 521 69.3
Phvul.010G145300 Phaseolus vulgaris HOM05D005013 ORTHO05D006005 9.7e-186 654.4 519 69.2
HanXRQChr02g0032251 Helianthus annuus HOM05D005013 ORTHO05D006005 1.3e-185 654.1 724 60.8
CsaV3_7G035280 Cucumis sativus L. HOM05D005013 ORTHO05D006005 2.2e-185 653.3 491 69.5
Glyma.07G015500 Glycine max HOM05D005013 ORTHO05D006005 2.2e-185 653.3 520 69.0
ClCG09G000200 Citrullus lanatus HOM05D005013 ORTHO05D006005 2.8e-185 652.9 506 67.8
RcHm_v2.0_Chr2g0140531 Rosa chinensis HOM05D005013 ORTHO05D006005 4.8e-185 652.1 743 58.4
Glyma.08G201000 Glycine max HOM05D005013 ORTHO05D006005 1.1e-184 651.0 520 68.7
Rhsim08G0227500 Rhododendron simsii HOM05D005013 ORTHO05D006005 1.1e-184 651.0 727 62.2
CANSAT56G0983 Cannabis sativa HOM05D005013 ORTHO05D006005 1.4e-184 650.6 534 65.0
Prupe.1G178600 Prunus persica HOM05D005013 ORTHO05D006005 4.1e-184 649.0 537 67.8
Prupe.3G059100 Prunus persica HOM05D005013 ORTHO05D006005 4.1e-184 649.0 537 67.4
Actinidia32097 Actinidia chinensis HOM05D005013 ORTHO05D006005 6.9e-184 648.3 739 58.1
QL05p020046 Quercus lobata HOM05D005013 ORTHO05D006005 9.0e-184 647.9 499 69.1
Thecc.06G100000 Theobroma cacao HOM05D005013 ORTHO05D006005 9.0e-184 647.9 528 68.6
MELO3C024438.2 Cucumis melo HOM05D005013 ORTHO05D006005 2.0e-183 646.7 532 66.2
COL.COLO4_30512 Corchorus olitorius HOM05D005013 ORTHO05D006005 1.3e-182 644.0 536 67.4
Gohir.A09G081200 Gossypium hirsutum HOM05D005013 ORTHO05D006005 2.9e-182 642.9 532 68.0
Gohir.D09G081300 Gossypium hirsutum HOM05D005013 ORTHO05D006005 6.5e-182 641.7 532 67.9
DCAR_016188 Daucus carota HOM05D005013 ORTHO05D006005 8.5e-182 641.3 500 65.6
Gorai.006G096900 Gossypium raimondii HOM05D005013 ORTHO05D006005 8.5e-182 641.3 532 67.7
SalBow7G4596 Salvia bowleyana HOM05D005013 ORTHO05D006005 3.2e-181 639.4 510 67.1
CiPaw.02G145800 Carya illinoinensis HOM05D005013 ORTHO05D006005 1.6e-180 637.1 537 67.6
Duzib192G0488 Durio zibethinus HOM05D005013 ORTHO05D006005 3.6e-180 636.0 522 68.0
Sed0027607 Sechium edule HOM05D005013 ORTHO05D006005 3.0e-179 632.9 536 63.6
ECA247G2560 Erigeron canadensis HOM05D005013 ORTHO05D006005 5.1e-179 632.1 537 64.2
FvH4_6g32381 Fragaria vesca HOM05D005013 ORTHO05D006005 5.1e-179 632.1 723 58.0
Lsat_1_v5_gn_1_36740 Lactuca sativa HOM05D005013 ORTHO05D006005 1.5e-178 630.6 660 62.6
FAN14G4508 Fragaria x ananassa HOM05D005013 ORTHO05D006005 4.3e-178 629.0 723 57.7
FAN02G3590 Fragaria x ananassa HOM05D005013 ORTHO05D006005 7.4e-178 628.2 728 57.1
Psat2g107800 Pisum sativum HOM05D005013 ORTHO05D006005 7.4e-178 628.2 514 68.1
arahy.Tifrunner.gnm1.ann1.R367CR Arachis hypogaea HOM05D005013 ORTHO05D006005 1.7e-177 627.1 527 67.0
Lalb_Chr04g0262971 Lupinus albus HOM05D005013 ORTHO05D006005 8.2e-177 624.8 508 67.7
arahy.Tifrunner.gnm1.ann1.1M6YYJ Arachis hypogaea HOM05D005013 ORTHO05D006005 1.1e-176 624.4 527 66.6
Manes.04G134200 Manihot esculenta HOM05D005013 ORTHO05D006005 3.1e-176 622.9 516 65.1
FAN09G0199 Fragaria x ananassa HOM05D005013 ORTHO05D006005 5.3e-176 622.1 723 58.6
Lj3g0013010 Lotus japonicus HOM05D005013 ORTHO05D006005 5.3e-176 622.1 520 66.3
Gorai.003G061700 Gossypium raimondii HOM05D005013 ORTHO05D006005 1.2e-175 620.9 521 67.0
GSVIVG01016983001 Vitis vinifera HOM05D005013 ORTHO05D006005 4.5e-175 619.0 423 74.5
Oeu026781.2 Olea europaea HOM05D005013 ORTHO05D006005 1.7e-174 617.1 522 64.2
Manes.11G033651 Manihot esculenta HOM05D005013 ORTHO05D006005 2.9e-174 616.3 526 65.8
FAN05G1466 Fragaria x ananassa HOM05D005013 ORTHO05D006005 3.8e-174 615.9 725 57.7
Gohir.A02G117400 Gossypium hirsutum HOM05D005013 ORTHO05D006005 5.0e-174 615.5 521 65.1
PGR102G0015 Punica granatum HOM05D005013 ORTHO05D006005 6.5e-174 615.1 539 65.9
TPR.G26938 Trifolium pratense HOM05D005013 ORTHO05D006005 8.5e-174 614.8 510 67.3
Haze_15847 Corylus avellana HOM05D005013 ORTHO05D006005 1.4e-173 614.0 537 65.5
Medtr8g014460 Medicago truncatula HOM05D005013 ORTHO05D006005 3.2e-173 612.8 454 69.4
unitig_52.g17097 Utricularia gibba HOM05D005013 ORTHO05D006005 1.4e-171 607.4 493 63.7
Nn2g11173 Nelumbo nucifera HOM05D005013 ORTHO05D006005 3.0e-171 606.3 531 64.4
Atru.chr1.3523 Acer truncatum HOM05D005013 ORTHO05D006005 1.3e-169 600.9 527 63.6
Gohir.D03G057900 Gossypium hirsutum HOM05D005013 ORTHO05D006005 1.7e-169 600.5 471 69.6
PSO339G6278 Papaver somniferum HOM05D005013 ORTHO05D006005 2.2e-169 600.1 486 66.7
Potri.003G048900 Populus trichocarpa HOM05D005013 ORTHO05D006005 3.7e-169 599.4 526 65.2
Sabra01G0151600 Salix brachista HOM05D005013 ORTHO05D006005 6.3e-169 598.6 516 64.5
SGA_v2.0_scaffold4G02026 Striga asiatica HOM05D005013 ORTHO05D006005 8.2e-169 598.2 481 66.5
Potri.001G190000 Populus trichocarpa HOM05D005013 ORTHO05D006005 1.4e-168 597.4 517 63.8
PSO513G0173 Papaver somniferum HOM05D005013 ORTHO05D006005 3.1e-168 596.3 486 66.7
Aqoxy2G02285 Aquilegia oxysepala HOM05D005013 ORTHO05D006005 7.0e-168 595.1 538 61.0
TWI12G0488 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 2.0e-167 593.6 520 62.3
arahy.Tifrunner.gnm1.ann1.VUMD9N Arachis hypogaea HOM05D005013 ORTHO05D006005 1.7e-166 590.5 550 61.8
Lsat_1_v5_gn_4_97461 Lactuca sativa HOM05D005013 ORTHO05D006005 5.0e-166 589.0 717 57.6
Ca_23262_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 8.5e-166 588.2 404 72.8
Eucgr.F03078 Eucalyptus grandis HOM05D005013 ORTHO05D006005 1.0e-163 581.3 743 59.2
Aa31LG4G90 Aethionema arabicum HOM05D005013 ORTHO05D006005 2.3e-163 580.1 490 64.7
Hund07600 Selenicereus undatus HOM05D005013 ORTHO05D006005 5.2e-163 578.9 489 64.6
TWI75G0851 Tripterygium wilfordii HOM05D005013 ORTHO05D006005 2.0e-162 577.0 514 63.6
Carub.0002s2777 Capsella rubella HOM05D005013 ORTHO05D006005 5.7e-162 575.5 519 62.6
HanXRQChr09g0276241 Helianthus annuus HOM05D005013 ORTHO05D006005 9.7e-162 574.7 502 63.1
TAR623G0538 Trochodendron aralioides HOM05D005013 ORTHO05D006005 1.6e-159 567.4 396 73.7
Ca_23271_v3 Cicer arietinum L. HOM05D005013 ORTHO05D006005 3.5e-159 566.2 454 65.9
CAN.G1143.12 Capsicum annuum HOM05D005013 ORTHO05D006005 5.9e-159 565.5 510 60.6
Dinv30436 Davidia involucrata HOM05D005013 ORTHO05D006005 8.5e-158 561.6 608 65.1
MBI04_g36817_MAGBIO Magnolia biondii HOM05D005013 ORTHO05D006005 1.5e-157 560.8 735 53.3
Sp5g36040 Schrenkiella parvula HOM05D005013 ORTHO05D006005 2.1e-156 557.0 533 59.8
THA.LOC104819998 Tarenaya hassleriana HOM05D005013 ORTHO05D006005 1.0e-155 554.7 419 66.8
Thhalv10018561m.g Eutrema salsugineum HOM05D005013 ORTHO05D006005 2.6e-154 550.1 444 64.2
EL10Ac9g21206 Beta vulgaris HOM05D005013 ORTHO05D006005 5.7e-154 548.9 522 58.6
AT1G79730 Arabidopsis thaliana HOM05D005013 ORTHO05D006005 1.7e-153 547.4 481 63.4
Duzib160G0376 Durio zibethinus HOM05D005013 ORTHO05D006005 7.2e-149 531.9 492 61.0
AUR62022205 Chenopodium quinoa HOM05D005013 ORTHO05D006005 2.0e-146 523.9 505 58.4
A10p33120 Brassica napus HOM05D005013 ORTHO05D006005 7.5e-146 521.9 440 60.7
BcaC06g31994 Brassica carinata HOM05D005013 ORTHO05D006005 3.1e-144 516.5 434 61.1
Ah.01g005800 Amaranthus hybridus HOM05D005013 ORTHO05D006005 1.3e-142 511.1 716 52.8
AUR62031914 Chenopodium quinoa HOM05D005013 ORTHO05D006005 1.3e-142 511.1 521 58.0
BolC9t60139H Brassica oleracea HOM05D005013 ORTHO05D006005 9.5e-141 505.0 451 58.5
C09p74080 Brassica napus HOM05D005013 ORTHO05D006005 3.6e-140 503.1 374 66.0
ATR0661G470 Amborella trichopoda HOM05D005013 ORTHO05D006005 6.8e-139 498.8 452 60.0
AL2G41830 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 1.1e-136 491.5 508 56.7
arahy.Tifrunner.gnm1.ann1.YYV7TY Arachis hypogaea HOM05D005013 ORTHO05D006005 1.8e-136 490.7 544 53.7
Migut.D00991 Erythranthe guttata HOM05D005013 ORTHO05D006005 1.1e-133 481.5 374 66.6
Os08g0157100 Oryza sativa ssp. japonica HOM05D005013 ORTHO05D006005 1.8e-131 474.2 455 56.0
Zm00001eb415930 Zea mays HOM05D005013 ORTHO05D006005 1.0e-126 458.4 416 58.2
CDE12G0264 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 3.6e-124 449.9 446 55.8
Sc15g0001880 Simmondsia chinensis HOM05D005013 ORTHO05D006005 1.3e-121 441.4 567 56.6
Actinidia21716 Actinidia chinensis HOM05D005013 ORTHO05D006005 6.0e-119 432.6 353 65.7
Zm00001eb172540 Zea mays HOM05D005013 ORTHO05D006005 4.7e-108 396.4 316 62.7
Mapoly0123s0029 Marchantia polymorpha HOM05D005013 ORTHO05D006005 3.8e-105 386.7 423 50.8
BcaNung02135 Brassica carinata HOM05D005013 ORTHO05D006005 3.5e-103 380.2 350 57.7
SMO116G0383 Selaginella moellendorffii HOM05D005013 ORTHO05D006005 2.0e-98 364.4 355 54.4
AagrBONN_evm.TU.Sc2ySwM_117.3356 Anthoceros agrestis HOM05D005013 ORTHO05D006005 2.6e-98 364.0 428 47.7
Pp3c1_7460 Physcomitrium patens HOM05D005013 ORTHO05D006005 1.1e-96 358.6 392 49.7
TAR369G0672 Trochodendron aralioides HOM05D005013 ORTHO05D006005 9.3e-96 355.5 442 49.3
SHI11095 Sapria himalayana HOM05D005013 ORTHO05D006005 3.4e-90 337.0 472 47.9
AL2G41840 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 6.9e-83 312.8 217 71.9
HPP92_015196 Vanilla planifolia HOM05D005013 ORTHO05D006005 2.6e-82 310.8 302 61.9
Ah.01g022080 Amaranthus hybridus HOM05D005013 ORTHO05D006005 1.7e-73 281.6 499 40.3
Cpa.g.sc109.1 Carica papaya HOM05D005013 ORTHO05D006005 2.1e-71 274.6 480 57.7
Cpa.g.sc109.3 Carica papaya HOM05D005013 ORTHO05D006005 2.1e-71 274.6 210 65.7
CDE06G0689 Ceratophyllum demersum HOM05D005013 ORTHO05D006005 6.7e-70 269.6 400 44.0
CBR_g8033 Chara braunii HOM05D005013 ORTHO05D006005 1.4e-67 261.9 366 41.5
BraA10t45345Z Brassica rapa HOM05D005013 ORTHO05D006005 1.9e-64 251.5 177 72.3
HPP92_015185 Vanilla planifolia HOM05D005013 ORTHO05D006005 4.5e-50 203.8 191 57.1
Migut.I00890 Erythranthe guttata HOM05D005013 ORTHO05D006005 1.6e-47 195.3 537 28.7
Lj5C53T3 Lonicera japonica HOM05D005013 ORTHO05D006005 1.0e-46 192.6 209 49.8
Oeu023599.1 Olea europaea HOM05D005013 ORTHO05D006005 3.1e-43 181.0 129 66.7
CARHR074670 Cardamine hirsuta HOM05D005013 ORTHO05D006005 1.8e-35 155.2 181 55.8
Psat4g155920 Pisum sativum HOM05D001854 ORTHO05D001800 7.5e-29 133.3 95 68.4
Psat4g155880 Pisum sativum HOM05D001854 ORTHO05D001800 2.8e-28 131.3 95 66.3
Oeu023601.1 Olea europaea HOM05D005013 ORTHO05D006005 3.7e-28 131.0 329 47.4
Lsat_1_v5_gn_6_46660 Lactuca sativa HOM05D005013 ORTHO05D006005 1.5e-24 119.0 94 62.8
CAN.G907.1 Capsicum annuum HOM05D005013 ORTHO05D006005 2.5e-24 118.2 88 69.3
Nn2g13410 Nelumbo nucifera HOM05D005013 ORTHO05D006005 3.0e-22 111.3 120 52.5
TAR560G0009 Trochodendron aralioides HOM05D005013 ORTHO05D006005 4.0e-22 110.9 144 58.3
Cre12.g520250 Chlamydomonas reinhardtii HOM05D005013 ORTHO05D006005 4.4e-21 107.5 237 32.1
Oeu026780.1 Olea europaea HOM05D005013 ORTHO05D006005 7.5e-21 106.7 146 56.2
MCO01G084 Micromonas commoda HOM05D005013 ORTHO05D006005 1.7e-17 95.5 344 27.0
vmacro04324 Vaccinium macrocarpon HOM05D005013 ORTHO05D006005 3.6e-15 87.8 124 44.4
CAN.G1143.9 Capsicum annuum HOM05D000602 ORTHO05D001147 3.1e-14 84.7 120 42.5
CAN.G1143.11 Capsicum annuum HOM05D005013 ORTHO05D115532 8.3e-12 76.6 44 81.8
CBR_g48652 Chara braunii HOM05D005013 ORTHO05D006005 2.4e-11 75.1 161 34.2
AL2G25330 Arabidopsis lyrata HOM05D005013 ORTHO05D006005 2.0e-10 72.0 106 45.3
Lsat_1_v5_gn_1_14160 Lactuca sativa HOM05D005013 ORTHO05D006005 2.7e-10 71.6 116 40.5
SEGI_39677 Sequoiadendron giganteum HOM05D050634 ORTHO05D006005 6.8e-06 57.0 111 35.1


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