Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g02450 Coffea canephora HOM05D006896 ORTHO05D007622 3.0e-92 342.0 198 100.0
Cc02_g30070 Coffea canephora HOM05D006896 ORTHO05D007622 4.2e-62 241.9 205 77.1
Nitab4.5_0001057g0240 Nicotiana tabacum HOM05D006896 ORTHO05D007622 8.5e-39 164.5 157 56.1
Nitab4.5_0002546g0010 Nicotiana tabacum HOM05D006896 ORTHO05D007622 1.4e-38 163.7 157 55.4
Peaxi162Scf00152g00734 Petunia axillaris HOM05D006896 ORTHO05D007622 3.3e-35 152.5 152 52.6
CAN.G855.24 Capsicum annuum HOM05D006896 ORTHO05D007622 1.0e-31 141.0 145 51.7
Sopen06g034890 Solanum pennellii HOM05D006896 ORTHO05D007622 1.0e-31 141.0 144 50.0
PGSC0003DMG400024908 Solanum tuberosum HOM05D006896 ORTHO05D007622 1.8e-28 130.2 140 47.9
Solyc06g083505.1 Solanum lycopersicum HOM05D006896 ORTHO05D007622 1.1e-27 127.5 130 48.5
PGSC0003DMG401020091 Solanum tuberosum HOM05D006896 ORTHO05D007622 2.0e-27 126.7 145 46.9
DCAR_021683 Daucus carota HOM05D006896 ORTHO05D007622 1.6e-24 117.1 204 39.2
TAR636G1166 Trochodendron aralioides HOM05D006896 ORTHO05D007622 4.5e-24 115.5 211 40.8
DCAR_023372 Daucus carota HOM05D001895 ORTHO05D002082 4.2e-22 109.0 151 43.0
Nn1g00183 Nelumbo nucifera HOM05D006896 ORTHO05D007622 7.2e-22 108.2 211 38.4
unitig_27.g25077 Utricularia gibba HOM05D006896 ORTHO05D007622 7.2e-22 108.2 143 42.0
Cpa.g.sc25.137 Carica papaya HOM05D006896 ORTHO05D007622 1.2e-21 107.5 155 43.2
Eucgr.F03083 Eucalyptus grandis HOM05D006896 ORTHO05D007622 1.6e-21 107.1 157 40.1
GSVIVG01016958001 Vitis vinifera HOM05D006896 ORTHO05D007622 1.4e-20 104.0 195 42.1
Ciclev10026494m.g Citrus clementina HOM05D006896 ORTHO05D007622 8.8e-20 101.3 153 41.2
Actinidia05615 Actinidia chinensis HOM05D006896 ORTHO05D007622 2.0e-19 100.1 160 39.4
Manes.04G135200 Manihot esculenta HOM05D006896 ORTHO05D007622 9.8e-19 97.8 131 43.5
SGA_v2.0_scaffold265G46057 Striga asiatica HOM05D007352 ORTHO05D009389 9.8e-19 97.8 144 40.3
THA.LOC104825918 Tarenaya hassleriana HOM05D006896 ORTHO05D007622 2.2e-18 96.7 160 38.1
Ciclev10022257m.g Citrus clementina HOM05D006896 ORTHO05D007622 2.8e-18 96.3 163 37.4
PGR102G1058 Punica granatum HOM05D006896 ORTHO05D007622 4.1e-17 92.4 177 36.7
Gohir.A09G147400 Gossypium hirsutum HOM05D006896 ORTHO05D007622 5.4e-17 92.0 155 37.4
Gorai.006G164500 Gossypium raimondii HOM05D006896 ORTHO05D007622 1.2e-16 90.9 155 37.4
RhsimUnG0044500 Rhododendron simsii HOM05D006896 ORTHO05D007622 1.2e-16 90.9 135 39.3
Gohir.D09G143000 Gossypium hirsutum HOM05D006896 ORTHO05D007622 1.6e-16 90.5 155 37.4
Migut.I00962 Erythranthe guttata HOM05D006896 ORTHO05D007622 3.5e-16 89.4 156 36.5
Thhalv10023695m.g Eutrema salsugineum HOM05D006896 ORTHO05D007622 7.7e-16 88.2 156 35.9
BcaB05g23986 Brassica carinata HOM05D006896 ORTHO05D007622 1.3e-15 87.4 157 37.6
CiPaw.04G076100 Carya illinoinensis HOM05D006896 ORTHO05D007622 2.2e-15 86.7 217 35.0
SalBow1G2551 Salvia bowleyana HOM05D006896 ORTHO05D007622 3.8e-15 85.9 136 38.2
Aqoxy3G03866 Aquilegia oxysepala HOM05D006896 ORTHO05D007622 1.5e-14 84.0 149 32.9
MD08G1165000 Malus domestica HOM05D006896 ORTHO05D007622 3.2e-14 82.8 168 35.7
CANSAT21G0002 Cannabis sativa HOM05D006896 ORTHO05D007622 5.5e-14 82.0 152 38.8
MD15G1357300 Malus domestica HOM05D006896 ORTHO05D007622 7.2e-14 81.6 216 34.7
AT4G01590 Arabidopsis thaliana HOM05D006896 ORTHO05D007622 2.7e-13 79.7 135 34.1
BcaC03g16098 Brassica carinata HOM05D006896 ORTHO05D007622 3.6e-13 79.3 136 36.8
A02p24490 Brassica napus HOM05D006896 ORTHO05D007622 4.7e-13 79.0 136 36.8
C02p38670 Brassica napus HOM05D006896 ORTHO05D007622 4.7e-13 79.0 136 36.8
BolC2t09885H Brassica oleracea HOM05D006896 ORTHO05D007622 4.7e-13 79.0 136 36.8
BraA02t07439Z Brassica rapa HOM05D006896 ORTHO05D007622 4.7e-13 79.0 136 36.8
ECA240G1433 Erigeron canadensis HOM05D006896 ORTHO05D007622 6.1e-13 78.6 158 36.7
Carub.0006s3560 Capsella rubella HOM05D006896 ORTHO05D007622 8.0e-13 78.2 144 38.2
Hund07447 Selenicereus undatus HOM05D006896 ORTHO05D007622 1.0e-12 77.8 162 35.8
Sc15g0001740 Simmondsia chinensis HOM05D006896 ORTHO05D007622 1.4e-12 77.4 158 29.7
Phvul.006G182200 Phaseolus vulgaris HOM05D006896 ORTHO05D007622 2.3e-12 76.6 166 34.9
Sp6g01500 Schrenkiella parvula HOM05D006896 ORTHO05D007622 4.0e-12 75.9 123 37.4
Zm00001eb122950 Zea mays HOM05D006896 ORTHO05D007622 4.0e-12 75.9 134 33.6
Aa31LG5G1310 Aethionema arabicum HOM05D006896 ORTHO05D007622 5.2e-12 75.5 187 33.2
AL6G51750 Arabidopsis lyrata HOM05D006896 ORTHO05D007622 6.8e-12 75.1 147 32.7
CARHR250080 Cardamine hirsuta HOM05D006896 ORTHO05D007622 6.8e-12 75.1 133 36.8
HanXRQChr04g0122251 Helianthus annuus HOM05D006896 ORTHO05D007622 6.8e-12 75.1 161 34.8
EL10Ac4g10121 Beta vulgaris HOM05D006896 ORTHO05D007622 1.2e-11 74.3 158 33.5
EL10Ac4g10168 Beta vulgaris HOM05D006896 ORTHO05D007622 1.2e-11 74.3 158 33.5
Thhalv10028974m.g Eutrema salsugineum HOM05D006896 ORTHO05D007622 1.2e-11 74.3 139 31.7
Haze_24358 Corylus avellana HOM05D006896 ORTHO05D007622 1.5e-11 73.9 169 32.0
Glyma.15G077800 Glycine max HOM05D006896 ORTHO05D007622 2.0e-11 73.6 145 38.6
Glyma.15G171400 Glycine max HOM05D006896 ORTHO05D007622 2.0e-11 73.6 145 38.6
A07p06970 Brassica napus HOM05D006896 ORTHO05D007622 2.6e-11 73.2 161 34.8
Thecc.01G002700 Theobroma cacao HOM05D006896 ORTHO05D007622 2.6e-11 73.2 162 31.5
TWI75G0052 Tripterygium wilfordii HOM05D006896 ORTHO05D007622 2.6e-11 73.2 149 34.2
Lalb_Chr02g0144491 Lupinus albus HOM05D006896 ORTHO05D007622 3.4e-11 72.8 199 33.7
QL06p022383 Quercus lobata HOM05D006896 ORTHO05D007622 3.4e-11 72.8 175 33.7
PSO210G5688 Papaver somniferum HOM05D006896 ORTHO05D007622 9.8e-11 71.2 169 32.0
Lsat_1_v5_gn_7_60640 Lactuca sativa HOM05D006896 ORTHO05D007622 1.3e-10 70.9 155 34.8
ECA233G6105 Erigeron canadensis HOM05D006896 ORTHO05D007622 2.2e-10 70.1 209 30.1
EL10Ac4g10129 Beta vulgaris HOM05D006896 ORTHO05D007622 4.9e-10 68.9 140 32.9
AT4G35685 Arabidopsis thaliana HOM05D006896 ORTHO05D007622 1.1e-09 67.8 150 33.3
EL10Ac4g10131 Beta vulgaris HOM05D006896 ORTHO05D007622 1.1e-09 67.8 140 32.1
VMungo0540G0426 Vigna mungo HOM05D006896 ORTHO05D007622 1.1e-09 67.8 159 32.7
Os07g0611600 Oryza sativa ssp. japonica HOM05D006896 ORTHO05D007622 1.4e-09 67.4 110 36.4
EL10Ac4g10155 Beta vulgaris HOM05D006896 ORTHO05D007622 1.8e-09 67.0 140 32.1
EL10Ac4g10160 Beta vulgaris HOM05D006896 ORTHO05D007622 1.8e-09 67.0 140 32.1
Carub.0003s1963 Capsella rubella HOM05D006896 ORTHO05D007622 1.8e-09 67.0 141 37.6
ClCG09G000270 Citrullus lanatus HOM05D006896 ORTHO05D007622 1.2e-08 64.3 115 37.4
SalBow2G3180 Salvia bowleyana HOM05D006896 ORTHO05D007622 1.2e-08 64.3 94 41.5
BraA07t28487Z Brassica rapa HOM05D006896 ORTHO05D007622 2.0e-08 63.5 153 32.0
TPR.G36966 Trifolium pratense HOM05D007426 ORTHO05D009167 2.0e-08 63.5 141 33.3
Lj2g0027443 Lotus japonicus HOM05D006896 ORTHO05D007622 2.7e-08 63.2 103 37.9
BcaB06g26744 Brassica carinata HOM05D006896 ORTHO05D007622 3.5e-08 62.8 198 38.4
Ah.06g194440 Amaranthus hybridus HOM05D006896 ORTHO05D007622 4.5e-08 62.4 208 35.6
C07p10600 Brassica napus HOM05D006896 ORTHO05D007622 5.9e-08 62.0 206 36.9
BolC7t41525H Brassica oleracea HOM05D006896 ORTHO05D007622 5.9e-08 62.0 206 36.9
Duzib235G0563 Durio zibethinus HOM05D006896 ORTHO05D007622 5.9e-08 62.0 211 26.1
Cfa015335 Carpinus fangiana HOM05D006896 ORTHO05D007622 1.0e-07 61.2 167 29.9
arahy.Tifrunner.gnm1.ann1.73V7U9 Arachis hypogaea HOM05D006896 ORTHO05D007622 1.7e-07 60.5 148 31.1
Sed0020352 Sechium edule HOM05D006896 ORTHO05D007622 1.7e-07 60.5 157 29.9
Psat6g044520 Pisum sativum HOM05D006896 ORTHO05D007622 5.0e-07 58.9 160 34.4
arahy.Tifrunner.gnm1.ann1.530D0B Arachis hypogaea HOM05D006896 ORTHO05D007622 1.1e-06 57.8 139 30.2
Hma1.2p1_0151F.1_g067240 Hydrangea macrophylla HOM05D006896 ORTHO05D007622 1.5e-06 57.4 104 49.0
TAR636G1722 Trochodendron aralioides HOM05D006896 ORTHO05D007622 2.5e-06 56.6 80 37.5


User provided reference genes

Program Settings