Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g11200 Coffea canephora HOM05D006898 ORTHO05D008506 1.9e-124 449.1 222 100.0
PGSC0003DMG400003978 Solanum tuberosum HOM05D006898 ORTHO05D008506 7.2e-79 297.7 207 73.9
Nitab4.5_0001582g0070 Nicotiana tabacum HOM05D006898 ORTHO05D008506 4.7e-78 295.0 207 71.5
Dinv09447 Davidia involucrata HOM05D006898 ORTHO05D008506 1.0e-77 293.9 205 74.1
Peaxi162Scf00025g02821 Petunia axillaris HOM05D006898 ORTHO05D008506 1.0e-77 293.9 207 72.0
Prupe.1G463000 Prunus persica HOM05D006898 ORTHO05D008506 1.4e-77 293.5 207 71.5
Solyc11g005580.1 Solanum lycopersicum HOM05D006898 ORTHO05D008506 2.3e-77 292.7 207 72.5
CANSAT21G1714 Cannabis sativa HOM05D006898 ORTHO05D008506 3.0e-77 292.4 201 74.1
Hma1.2p1_0214F.1_g090725 Hydrangea macrophylla HOM05D006898 ORTHO05D008506 5.2e-77 291.6 203 71.9
Oeu007490.1 Olea europaea HOM05D006898 ORTHO05D008506 5.2e-77 291.6 201 72.6
QL12p024620 Quercus lobata HOM05D006898 ORTHO05D008506 5.2e-77 291.6 201 71.6
Rhsim07G0174000 Rhododendron simsii HOM05D006898 ORTHO05D008506 6.7e-77 291.2 204 71.1
CAN.G476.10 Capsicum annuum HOM05D006898 ORTHO05D008506 1.1e-76 290.4 207 72.0
Sopen11g001550 Solanum pennellii HOM05D006898 ORTHO05D008506 1.1e-76 290.4 207 71.5
Haze_21680 Corylus avellana HOM05D006898 ORTHO05D008506 2.0e-76 289.7 203 71.4
FvH4_2g30630 Fragaria vesca HOM05D006898 ORTHO05D008506 2.6e-76 289.3 205 71.7
FAN15G2927 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.3e-76 288.9 205 71.7
FAN20G0784 Fragaria x ananassa HOM05D006898 ORTHO05D008506 3.3e-76 288.9 205 71.7
Nitab4.5_0002138g0020 Nicotiana tabacum HOM05D006898 ORTHO05D008506 3.3e-76 288.9 208 71.6
FAN24G1534 Fragaria x ananassa HOM05D006898 ORTHO05D008506 4.4e-76 288.5 205 71.2
COL.COLO4_18635 Corchorus olitorius HOM05D006898 ORTHO05D008506 5.7e-76 288.1 203 70.9
TWI31G0903 Tripterygium wilfordii HOM05D006898 ORTHO05D008506 9.7e-76 287.3 205 70.7
vmacro05087 Vaccinium macrocarpon HOM05D006898 ORTHO05D008506 1.3e-75 287.0 204 72.5
Migut.A00518 Erythranthe guttata HOM05D006898 ORTHO05D008506 2.2e-75 286.2 204 70.6
Atru.chr7.2715 Acer truncatum HOM05D006898 ORTHO05D008506 6.3e-75 284.6 203 71.9
RcHm_v2.0_Chr6g0312281 Rosa chinensis HOM05D006898 ORTHO05D008506 6.3e-75 284.6 205 69.3
Thecc.09G001800 Theobroma cacao HOM05D006898 ORTHO05D008506 6.3e-75 284.6 205 70.7
CiPaw.07G215200 Carya illinoinensis HOM05D006898 ORTHO05D008506 8.2e-75 284.3 201 70.6
Duzib168G1571 Durio zibethinus HOM05D006898 ORTHO05D008506 5.3e-74 281.6 203 70.0
Lj8A413G21 Lonicera japonica HOM05D006898 ORTHO05D008506 7.0e-74 281.2 206 69.9
Manes.02G165600 Manihot esculenta HOM05D006898 ORTHO05D008506 9.1e-74 280.8 203 70.9
Actinidia03566 Actinidia chinensis HOM05D006898 ORTHO05D008506 2.7e-73 279.3 202 69.8
DCAR_004547 Daucus carota HOM05D006898 ORTHO05D008506 3.5e-73 278.9 206 68.9
Eucgr.C02146 Eucalyptus grandis HOM05D006898 ORTHO05D008506 3.5e-73 278.9 203 69.0
Glyma.14G132300 Glycine max HOM05D006898 ORTHO05D008506 3.5e-73 278.9 202 71.8
TPR.G12020 Trifolium pratense HOM05D006898 ORTHO05D008506 4.5e-73 278.5 204 69.6
Lj5g0012927 Lotus japonicus HOM05D006898 ORTHO05D008506 5.9e-73 278.1 203 71.4
AUR62028029 Chenopodium quinoa HOM05D006898 ORTHO05D008506 1.0e-72 277.3 203 68.5
CSS0039012 Camellia sinensis var. sinensis HOM05D006898 ORTHO05D008506 1.3e-72 276.9 208 67.3
MELO3C003647.2 Cucumis melo HOM05D006898 ORTHO05D008506 1.3e-72 276.9 201 70.1
TAR383G0625 Trochodendron aralioides HOM05D006898 ORTHO05D008506 1.7e-72 276.6 203 70.0
Ca_12885_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.9e-72 275.8 201 69.2
Medtr1g010070 Medicago truncatula HOM05D006898 ORTHO05D008506 2.9e-72 275.8 203 70.0
AUR62020696 Chenopodium quinoa HOM05D006898 ORTHO05D008506 3.8e-72 275.4 203 68.0
Gohir.D07G001300 Gossypium hirsutum HOM05D006898 ORTHO05D008506 3.8e-72 275.4 201 71.6
Potri.005G179700 Populus trichocarpa HOM05D006898 ORTHO05D008506 3.8e-72 275.4 203 68.5
Hund19373 Selenicereus undatus HOM05D006898 ORTHO05D008506 3.8e-72 275.4 207 69.6
SGA_v2.0_scaffold27G11702 Striga asiatica HOM05D006898 ORTHO05D008506 8.5e-72 274.2 205 68.8
Psat6g031720 Pisum sativum HOM05D006898 ORTHO05D008506 1.5e-71 273.5 201 68.7
Gorai.001G001000 Gossypium raimondii HOM05D006898 ORTHO05D008506 1.9e-71 273.1 210 68.6
CsaV3_3G046900 Cucumis sativus L. HOM05D006898 ORTHO05D008506 3.2e-71 272.3 201 68.7
Ciclev10008259m.g Citrus clementina HOM05D006898 ORTHO05D008506 5.5e-71 271.6 201 71.1
Lalb_Chr22g0361311 Lupinus albus HOM05D006898 ORTHO05D008506 5.5e-71 271.6 201 68.2
EL10Ac2g03651 Beta vulgaris HOM05D006898 ORTHO05D008506 7.2e-71 271.2 203 67.0
ClCG05G017390 Citrullus lanatus HOM05D006898 ORTHO05D008506 7.2e-71 271.2 201 69.2
arahy.Tifrunner.gnm1.ann1.TJ47BC Arachis hypogaea HOM05D006898 ORTHO05D008506 9.4e-71 270.8 201 69.7
VMungo0647G2166 Vigna mungo HOM05D006898 ORTHO05D008506 9.4e-71 270.8 201 67.7
arahy.Tifrunner.gnm1.ann1.UC5PKR Arachis hypogaea HOM05D006898 ORTHO05D008506 1.2e-70 270.4 201 69.7
Glyma.11G174910 Glycine max HOM05D006898 ORTHO05D008506 1.2e-70 270.4 203 68.5
MD15G1110800 Malus domestica HOM05D006898 ORTHO05D008506 1.2e-70 270.4 205 66.8
SalBow4G3225 Salvia bowleyana HOM05D006898 ORTHO05D008506 2.1e-70 269.6 202 68.8
Gohir.A07G000900 Gossypium hirsutum HOM05D006898 ORTHO05D008506 2.7e-70 269.2 201 69.7
GSVIVG01035599001 Vitis vinifera HOM05D006898 ORTHO05D008506 3.6e-70 268.9 203 70.4
Sed0005742 Sechium edule HOM05D006898 ORTHO05D008506 4.7e-70 268.5 201 67.2
CARHR202380 Cardamine hirsuta HOM05D006898 ORTHO05D008506 8.0e-70 267.7 205 65.9
MD08G1133300 Malus domestica HOM05D006898 ORTHO05D008506 1.4e-69 266.9 205 65.4
Sp6g32580 Schrenkiella parvula HOM05D006898 ORTHO05D008506 2.3e-69 266.2 206 66.5
AT5G10910 Arabidopsis thaliana HOM05D006898 ORTHO05D008506 3.0e-69 265.8 207 65.7
Phvul.001G057500 Phaseolus vulgaris HOM05D006898 ORTHO05D008506 4.0e-69 265.4 202 67.8
CDE06G0577 Ceratophyllum demersum HOM05D006898 ORTHO05D008506 8.8e-69 264.2 201 67.2
Nn5g26940 Nelumbo nucifera HOM05D006898 ORTHO05D008506 1.2e-68 263.8 201 68.2
PGR142G0710 Punica granatum HOM05D006898 ORTHO05D008506 1.5e-68 263.5 207 66.7
Sc06g0001380 Simmondsia chinensis HOM05D006898 ORTHO05D008506 2.0e-68 263.1 204 65.7
Aqoxy7G02535 Aquilegia oxysepala HOM05D006898 ORTHO05D008506 3.4e-68 262.3 202 66.8
Carub.0006s0940 Capsella rubella HOM05D006898 ORTHO05D008506 4.4e-68 261.9 206 65.0
Ah.10g033620 Amaranthus hybridus HOM05D006898 ORTHO05D008506 5.7e-68 261.5 205 63.9
THA.LOC104824957 Tarenaya hassleriana HOM05D006898 ORTHO05D008506 5.7e-68 261.5 209 65.6
BcaC04g19278 Brassica carinata HOM05D006898 ORTHO05D008506 7.5e-68 261.2 206 65.0
Thhalv10013596m.g Eutrema salsugineum HOM05D006898 ORTHO05D008506 1.3e-67 260.4 206 64.6
PSO017G3342 Papaver somniferum HOM05D006898 ORTHO05D008506 1.3e-67 260.4 202 66.8
PSO170G2692 Papaver somniferum HOM05D006898 ORTHO05D008506 1.3e-67 260.4 204 66.2
AL6G21470 Arabidopsis lyrata HOM05D006898 ORTHO05D008506 1.7e-67 260.0 207 64.7
HanXRQChr17g0538631 Helianthus annuus HOM05D006898 ORTHO05D008506 6.3e-67 258.1 201 67.7
Lj8C418G2 Lonicera japonica HOM05D006898 ORTHO05D008506 6.3e-67 258.1 195 67.7
unitig_748.g8163 Utricularia gibba HOM05D006898 ORTHO05D008506 6.3e-67 258.1 201 64.7
A10p26780 Brassica napus HOM05D006898 ORTHO05D008506 8.3e-67 257.7 206 63.6
C09p65920 Brassica napus HOM05D006898 ORTHO05D008506 1.4e-66 256.9 206 64.1
BolC9t59415H Brassica oleracea HOM05D006898 ORTHO05D008506 1.4e-66 256.9 206 63.6
Os02g0137600 Oryza sativa ssp. japonica HOM05D006898 ORTHO05D008506 1.4e-66 256.9 203 65.0
Sabra05G0135900 Salix brachista HOM05D006898 ORTHO05D008506 1.2e-65 253.8 197 66.0
ECA246G1941 Erigeron canadensis HOM05D006898 ORTHO05D008506 2.7e-65 252.7 198 66.7
BraA10t44732Z Brassica rapa HOM05D004194 ORTHO05D005641 2.9e-64 249.2 202 62.9
Lsat_1_v5_gn_3_25521 Lactuca sativa HOM05D006898 ORTHO05D008506 2.9e-64 249.2 197 67.0
ATR0626G384 Amborella trichopoda HOM05D006898 ORTHO05D008506 8.5e-64 247.7 202 62.9
Aa31LG3G16210 Aethionema arabicum HOM05D004194 ORTHO05D005641 2.5e-63 246.1 199 61.8
HPP92_018578 Vanilla planifolia HOM05D006898 ORTHO05D008506 3.2e-63 245.7 200 61.0
HPP92_018581 Vanilla planifolia HOM05D006898 ORTHO05D008506 5.5e-63 245.0 200 60.5
Cpa.g.sc117.17 Carica papaya HOM05D006898 ORTHO05D008506 3.6e-62 242.3 204 65.7
FAN20G2020 Fragaria x ananassa HOM05D006898 ORTHO05D008506 1.8e-58 229.9 179 66.5
Glyma.17G200800 Glycine max HOM05D006898 ORTHO05D008506 8.9e-53 211.1 141 73.0
Mapoly0071s0027 Marchantia polymorpha HOM05D006898 ORTHO05D008506 9.5e-47 191.0 225 48.0
Pp3c15_22340 Physcomitrium patens HOM05D006898 ORTHO05D008506 7.0e-42 174.9 221 46.2
Cre13.g568150 Chlamydomonas reinhardtii HOM05D006898 ORTHO05D008506 6.6e-32 141.7 207 39.6
MCO14G201 Micromonas commoda HOM05D006898 ORTHO05D008506 1.2e-30 137.5 202 36.1
SMO119G0345 Selaginella moellendorffii HOM05D006898 ORTHO05D008506 5.2e-29 132.1 201 41.3
QL07p037905 Quercus lobata HOM05D006898 ORTHO05D008506 6.4e-27 125.2 84 75.0
PRCOL_00004989 Prasinoderma coloniale HOM05D006898 ORTHO05D008506 4.6e-25 119.0 203 35.5
CBR_g40185 Chara braunii HOM05D000019 ORTHO05D001702 1.2e-17 94.4 154 42.9
AagrBONN_evm.TU.Sc2ySwM_228.2079 Anthoceros agrestis HOM05D006898 ORTHO05D008506 6.0e-17 92.0 93 49.5
AagrBONN_evm.TU.Sc2ySwM_362.1618 Anthoceros agrestis HOM05D006898 ORTHO05D008506 9.6e-15 84.7 85 50.6
VMungo1309G1975 Vigna mungo HOM05D006898 ORTHO05D008506 5.3e-13 79.0 116 43.1
Ca_29432_v3 Cicer arietinum L. HOM05D006898 ORTHO05D008506 2.2e-11 73.6 186 32.8


User provided reference genes

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