Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 4.1e-303 1043.9 510 100.0
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 1.7e-179 633.3 495 71.1
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 1.5e-167 593.6 492 65.9
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 5.5e-167 591.7 492 64.6
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 6.1e-166 588.2 490 65.1
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 6.1e-166 588.2 494 63.2
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 2.3e-165 586.3 491 64.0
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 6.8e-165 584.7 493 63.9
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 8.9e-165 584.3 496 63.9
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 1.2e-164 583.9 495 64.0
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.2e-164 583.9 494 63.4
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 1.2e-164 583.9 501 64.1
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 2.6e-164 582.8 519 62.6
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 5.7e-164 581.6 498 62.9
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 5.7e-164 581.6 493 63.3
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 1.3e-163 580.5 492 63.4
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 1.7e-163 580.1 489 63.8
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 1.7e-163 580.1 492 64.2
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 2.2e-163 579.7 492 64.2
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 2.2e-163 579.7 495 63.4
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 4.9e-163 578.6 508 61.8
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 4.9e-163 578.6 496 63.3
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.1e-162 577.4 496 62.5
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.1e-162 577.4 489 63.6
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 1.1e-162 577.4 502 62.7
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 1.4e-162 577.0 486 64.0
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 3.1e-162 575.9 489 64.0
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 7.0e-162 574.7 494 63.0
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 1.2e-161 573.9 491 64.4
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 1.2e-161 573.9 495 62.6
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 1.6e-161 573.5 493 62.7
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 1.6e-161 573.5 495 62.4
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 2.0e-161 573.2 497 62.2
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 3.5e-161 572.4 497 62.8
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 4.5e-161 572.0 498 63.3
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 1.0e-160 570.9 487 63.7
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 2.3e-160 569.7 500 62.4
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 2.9e-160 569.3 505 62.2
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 2.9e-160 569.3 490 62.9
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 6.6e-160 568.2 501 62.3
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 1.1e-159 567.4 532 59.6
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 1.5e-159 567.0 518 62.0
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.5e-159 567.0 496 62.1
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 4.3e-159 565.5 491 62.3
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 5.6e-159 565.1 498 62.2
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.2e-158 563.9 500 60.6
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 2.8e-158 562.8 497 61.8
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 4.7e-158 562.0 489 62.6
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 4.7e-158 562.0 495 61.8
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 8.0e-158 561.2 500 61.2
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 8.0e-158 561.2 509 61.9
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 1.5e-156 557.0 513 60.6
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 2.6e-156 556.2 496 59.7
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 3.4e-156 555.8 489 61.1
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 5.7e-156 555.1 491 62.1
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 7.5e-156 554.7 492 60.2
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.3e-155 553.9 486 61.7
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.2e-155 553.1 489 61.8
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 8.3e-155 551.2 448 65.8
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 2.4e-154 549.7 491 61.1
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 3.2e-154 549.3 515 59.0
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 4.1e-154 548.9 499 59.9
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 4.1e-154 548.9 477 63.3
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 5.4e-154 548.5 499 60.1
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 7.0e-154 548.1 512 58.6
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 7.0e-154 548.1 511 59.3
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 9.2e-154 547.7 491 60.5
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.2e-153 547.4 488 60.7
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 3.5e-153 545.8 491 60.5
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 4.6e-153 545.4 515 59.0
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 4.6e-153 545.4 487 60.4
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 4.6e-153 545.4 477 61.6
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.7e-152 543.5 487 60.2
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 2.3e-152 543.1 521 59.3
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 3.0e-152 542.7 511 58.9
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 3.9e-152 542.3 494 60.7
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 1.1e-151 540.8 479 61.0
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 4.3e-151 538.9 475 61.1
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 1.1e-149 534.3 489 59.1
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 5.8e-148 528.5 491 58.9
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 7.8e-145 518.1 491 58.0
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 1.7e-144 516.9 506 57.7
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 8.6e-144 514.6 487 59.3
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 1.5e-143 513.8 489 58.5
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 1.5e-143 513.8 337 77.7
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 3.3e-143 512.7 538 55.4
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 1.1e-141 507.7 485 56.9
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 2.3e-141 506.5 337 75.1
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 3.1e-141 506.1 490 57.3
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 4.0e-141 505.8 502 57.8
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 2.6e-140 503.1 489 55.8
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.2e-137 494.2 524 55.3
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 3.3e-135 486.1 350 71.4
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.3e-131 474.2 458 58.1
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 6.4e-131 471.9 481 55.9
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 1.4e-130 470.7 479 53.4
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 1.2e-129 467.6 431 60.6
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 4.3e-127 459.1 370 66.2
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 3.1e-125 453.0 436 58.5
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 4.4e-124 449.1 585 48.4
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 1.3e-118 431.0 481 50.1
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 2.9e-115 419.9 489 48.5
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 7.6e-100 368.6 331 55.9
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 1.8e-96 357.5 329 61.1
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 5.1e-96 355.9 351 58.4
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 2.4e-93 347.1 346 58.1
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.2e-92 344.7 488 45.5
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 4.8e-70 269.6 316 51.9
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 5.9e-52 209.5 142 69.7
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.1e-49 201.1 142 68.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 8.9e-48 195.7 183 57.9
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.9e-18 98.2 57 80.7
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 1.6e-17 95.1 49 89.8
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 2.4e-16 91.3 74 62.2
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 9.0e-08 62.8 181 32.0
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 9.9e-07 59.3 52 63.5
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 9.9e-07 59.3 58 60.3
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 1.3e-06 58.9 46 71.7
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.7e-06 58.5 47 66.0


User provided reference genes

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