Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g06630 Coffea canephora HOM05D001129 ORTHO05D012333 8.4e-42 173.3 91 100.0
Cc06_g17050 Coffea canephora HOM05D001129 ORTHO05D003157 2.7e-16 88.6 45 97.8
CARHR167670 Cardamine hirsuta HOM05D001129 ORTHO05D003157 4.2e-09 64.7 45 73.3
Nitab4.5_0000733g0050 Nicotiana tabacum HOM05D001129 ORTHO05D003157 5.5e-09 64.3 45 73.3
Nitab4.5_0005611g0040 Nicotiana tabacum HOM05D001129 ORTHO05D003157 5.5e-09 64.3 45 73.3
Actinidia09336 Actinidia chinensis HOM05D001129 ORTHO05D003157 9.4e-09 63.5 41 75.6
Hma1.2p1_1168F.1_g263180 Hydrangea macrophylla HOM05D001129 ORTHO05D012333 9.4e-09 63.5 42 76.2
CAN.G676.66 Capsicum annuum HOM05D001129 ORTHO05D003157 1.2e-08 63.2 45 71.1
Solyc04g015680.3 Solanum lycopersicum HOM05D001129 ORTHO05D003157 1.2e-08 63.2 45 71.1
Sopen04g007760 Solanum pennellii HOM05D001129 ORTHO05D003157 1.2e-08 63.2 45 71.1
PGSC0003DMG400027247 Solanum tuberosum HOM05D001129 ORTHO05D003157 1.2e-08 63.2 45 71.1
Sed0017574 Sechium edule HOM05D001129 ORTHO05D003157 1.6e-08 62.8 45 73.3
MD12G1073300 Malus domestica HOM05D001129 ORTHO05D003157 2.7e-08 62.0 41 73.2
EL10Ac3g07087 Beta vulgaris HOM05D001129 ORTHO05D003157 3.6e-08 61.6 41 70.7
Dinv39598 Davidia involucrata HOM05D001129 ORTHO05D003157 3.6e-08 61.6 37 81.1
Sp5g05130 Schrenkiella parvula HOM05D001129 ORTHO05D003157 3.6e-08 61.6 50 66.0
Peaxi162Scf00493g00005 Petunia axillaris HOM05D001129 ORTHO05D003157 6.1e-08 60.8 45 71.1
AL5G39050 Arabidopsis lyrata HOM05D001129 ORTHO05D003157 7.9e-08 60.5 36 83.3
AL5G39030 Arabidopsis lyrata HOM05D001129 ORTHO05D003157 1.4e-07 59.7 33 87.9
MELO3C009685.2 Cucumis melo HOM05D001129 ORTHO05D003157 1.4e-07 59.7 45 68.9
CARHR167660 Cardamine hirsuta HOM05D001129 ORTHO05D003157 1.8e-07 59.3 45 68.9
AUR62024444 Chenopodium quinoa HOM05D001129 ORTHO05D003157 1.8e-07 59.3 37 73.0
AUR62026034 Chenopodium quinoa HOM05D001129 ORTHO05D003157 1.8e-07 59.3 37 73.0
Dinv39591 Davidia involucrata HOM05D001129 ORTHO05D003157 1.8e-07 59.3 41 73.2
Prupe.7G061600 Prunus persica HOM05D001129 ORTHO05D003157 1.8e-07 59.3 41 73.2
CsaV3_3G039410 Cucumis sativus L. HOM05D001129 ORTHO05D003157 2.3e-07 58.9 38 73.7
Manes.08G050900 Manihot esculenta HOM05D001129 ORTHO05D003157 2.3e-07 58.9 37 78.4
PSO339G2454 Papaver somniferum HOM05D001129 ORTHO05D003157 2.3e-07 58.9 45 71.1
Hund19150 Selenicereus undatus HOM05D001129 ORTHO05D003157 2.3e-07 58.9 45 71.1
TAR636G3238 Trochodendron aralioides HOM05D001129 ORTHO05D003157 2.3e-07 58.9 45 71.1
BcaB02g08315 Brassica carinata HOM05D001129 ORTHO05D003157 3.0e-07 58.5 50 64.0
BcaC02g09940 Brassica carinata HOM05D001129 ORTHO05D003157 3.0e-07 58.5 33 84.8
C04p34960 Brassica napus HOM05D001129 ORTHO05D003157 3.0e-07 58.5 33 84.8
BolC4t25051H Brassica oleracea HOM05D001129 ORTHO05D003157 3.0e-07 58.5 33 84.8
Manes.09G021500 Manihot esculenta HOM05D001129 ORTHO05D003157 3.0e-07 58.5 33 84.8
Rhsim03G0021400 Rhododendron simsii HOM05D001129 ORTHO05D003157 3.0e-07 58.5 38 78.9
Ah.04g151760 Amaranthus hybridus HOM05D001129 ORTHO05D003157 3.9e-07 58.2 41 68.3
BcaC07g40376 Brassica carinata HOM05D001129 ORTHO05D003157 3.9e-07 58.2 33 84.8
A04p03100 Brassica napus HOM05D001129 ORTHO05D003157 3.9e-07 58.2 33 84.8
CDE05G3167 Ceratophyllum demersum HOM05D001129 ORTHO05D003157 3.9e-07 58.2 33 84.8
Eucgr.A02358 Eucalyptus grandis HOM05D001129 ORTHO05D003157 3.9e-07 58.2 37 75.7
Eucgr.A02359 Eucalyptus grandis HOM05D001129 ORTHO05D003157 3.9e-07 58.2 37 75.7
Lsat_1_v5_gn_9_28860 Lactuca sativa HOM05D001129 ORTHO05D003157 3.9e-07 58.2 45 68.9
BcaB02g07601 Brassica carinata HOM05D001129 ORTHO05D003157 5.1e-07 57.8 33 84.8
BraA04t16033Z Brassica rapa HOM05D001129 ORTHO05D003157 5.1e-07 57.8 33 84.8
CSS0019735 Camellia sinensis var. sinensis HOM05D001129 ORTHO05D003157 5.1e-07 57.8 36 77.8
ClCG10G016980 Citrullus lanatus HOM05D001129 ORTHO05D003157 5.1e-07 57.8 78 46.2
Aqoxy1G00256 Aquilegia oxysepala HOM05D001129 ORTHO05D003157 6.7e-07 57.4 33 81.8
Carub.0005s2431 Capsella rubella HOM05D001129 ORTHO05D003157 6.7e-07 57.4 45 66.7
A09p50340 Brassica napus HOM05D001129 ORTHO05D003157 8.8e-07 57.0 33 81.8
C08p33010 Brassica napus HOM05D001129 ORTHO05D003157 8.8e-07 57.0 33 81.8
BolC8t50901H Brassica oleracea HOM05D001129 ORTHO05D003157 8.8e-07 57.0 33 81.8
BraA09t40487Z Brassica rapa HOM05D001129 ORTHO05D003157 8.8e-07 57.0 33 81.8
Dinv00382 Davidia involucrata HOM05D001129 ORTHO05D003157 8.8e-07 57.0 41 68.3
Duzib093G0335 Durio zibethinus HOM05D001129 ORTHO05D003157 8.8e-07 57.0 45 66.7
Duzib093G1038 Durio zibethinus HOM05D001129 ORTHO05D003157 8.8e-07 57.0 45 66.7
Eucgr.A02355 Eucalyptus grandis HOM05D001129 ORTHO05D003157 8.8e-07 57.0 37 73.0
Eucgr.A02357 Eucalyptus grandis HOM05D001129 ORTHO05D003157 8.8e-07 57.0 37 73.0
Hund24708 Selenicereus undatus HOM05D001129 ORTHO05D003157 8.8e-07 57.0 41 70.7
THA.LOC104802114 Tarenaya hassleriana HOM05D001129 ORTHO05D003157 8.8e-07 57.0 33 81.8
Thhalv10005770m.g Eutrema salsugineum HOM05D001129 ORTHO05D003157 1.1e-06 56.6 50 62.0
Thecc.05G154200 Theobroma cacao HOM05D001129 ORTHO05D003157 1.1e-06 56.6 33 75.8
Thecc.05G154700 Theobroma cacao HOM05D001129 ORTHO05D003157 1.1e-06 56.6 33 81.8
Carub.0004s0428 Capsella rubella HOM05D001129 ORTHO05D003157 1.5e-06 56.2 33 81.8
THA.LOC104824443 Tarenaya hassleriana HOM05D001129 ORTHO05D003157 1.5e-06 56.2 33 78.8
vmacro07860 Vaccinium macrocarpon HOM05D001129 ORTHO05D012333 1.5e-06 56.2 33 84.8
GSVIVG01033283001 Vitis vinifera HOM05D001129 ORTHO05D003157 1.5e-06 56.2 33 81.8
Cpa.g.sc92.47 Carica papaya HOM05D001129 ORTHO05D003157 2.0e-06 55.8 45 71.1
Duzib093G0063 Durio zibethinus HOM05D001129 ORTHO05D003157 2.0e-06 55.8 45 64.4
Nn7g36265 Nelumbo nucifera HOM05D001129 ORTHO05D003157 2.0e-06 55.8 34 79.4
CARHR167690 Cardamine hirsuta HOM05D001129 ORTHO05D003157 2.6e-06 55.5 33 81.8
MBI02_g23135_MAGBIO Magnolia biondii HOM05D001129 ORTHO05D003157 2.6e-06 55.5 33 81.8
Sp4g24050 Schrenkiella parvula HOM05D001129 ORTHO05D003157 2.6e-06 55.5 33 78.8
Duzib128G1487 Durio zibethinus HOM05D001129 ORTHO05D003157 3.3e-06 55.1 37 70.3
Lj2C384T5 Lonicera japonica HOM05D001129 ORTHO05D012333 3.3e-06 55.1 33 75.8
ATR0332G094 Amborella trichopoda HOM05D001129 ORTHO05D003157 4.4e-06 54.7 33 78.8
arahy.Tifrunner.gnm1.ann1.F2WDVD Arachis hypogaea HOM05D001129 ORTHO05D003157 4.4e-06 54.7 33 78.8
arahy.Tifrunner.gnm1.ann1.V41UA4 Arachis hypogaea HOM05D001129 ORTHO05D003157 4.4e-06 54.7 33 78.8
Gohir.A01G131500 Gossypium hirsutum HOM05D001129 ORTHO05D003157 4.4e-06 54.7 33 75.8
MD14G1071400 Malus domestica HOM05D001129 ORTHO05D003157 4.4e-06 54.7 44 65.9
Manes.09G021401 Manihot esculenta HOM05D001129 ORTHO05D003157 4.4e-06 54.7 33 78.8
TAR633G2160 Trochodendron aralioides HOM05D001129 ORTHO05D003157 4.4e-06 54.7 45 66.7
GSVIVG01033284001 Vitis vinifera HOM05D001129 ORTHO05D003157 4.4e-06 54.7 33 78.8
CiPaw.10G033100 Carya illinoinensis HOM05D001129 ORTHO05D003157 5.7e-06 54.3 36 75.0
Migut.J01762 Erythranthe guttata HOM05D001129 ORTHO05D003157 5.7e-06 54.3 33 78.8
vmacro07861 Vaccinium macrocarpon HOM05D001129 ORTHO05D003157 5.7e-06 54.3 33 81.8
vmacro22459 Vaccinium macrocarpon HOM05D001129 ORTHO05D003157 5.7e-06 54.3 33 81.8
Actinidia09332 Actinidia chinensis HOM05D001129 ORTHO05D003157 7.4e-06 53.9 40 62.5
Actinidia09335 Actinidia chinensis HOM05D001129 ORTHO05D003157 7.4e-06 53.9 40 62.5
Aa31LG10G12310 Aethionema arabicum HOM05D001129 ORTHO05D003157 7.4e-06 53.9 33 78.8
DCAR_020490 Daucus carota HOM05D001129 ORTHO05D003157 7.4e-06 53.9 33 75.8
ECA247G0911 Erigeron canadensis HOM05D001129 ORTHO05D003157 7.4e-06 53.9 48 60.4
Thhalv10016187m.g Eutrema salsugineum HOM05D001129 ORTHO05D003157 7.4e-06 53.9 33 75.8
Gorai.002G147500 Gossypium raimondii HOM05D001129 ORTHO05D003157 7.4e-06 53.9 33 75.8
SMO337G0024 Selaginella moellendorffii HOM05D001129 ORTHO05D003157 7.4e-06 53.9 37 73.0
Aa31LG1G23800 Aethionema arabicum HOM05D001129 ORTHO05D003157 9.7e-06 53.5 33 72.7
CANSAT80G2109 Cannabis sativa HOM05D001129 ORTHO05D003157 9.7e-06 53.5 36 72.2
COL.COLO4_28275 Corchorus olitorius HOM05D001129 ORTHO05D003157 9.7e-06 53.5 36 72.2
Nitab4.5_0005611g0030 Nicotiana tabacum HOM05D001129 ORTHO05D003157 9.7e-06 53.5 37 73.0
Potri.006G050700 Populus trichocarpa HOM05D001129 ORTHO05D003157 9.7e-06 53.5 33 78.8
PGR004G1628 Punica granatum HOM05D001129 ORTHO05D003157 9.7e-06 53.5 41 70.7


User provided reference genes

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