Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g02810 Coffea canephora HOM05D002762 ORTHO05D008831 0.0e+00 1249.2 627 100.0
CSS0041967 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 2.1e-280 968.8 630 74.1
Actinidia40215 Actinidia chinensis HOM05D002762 ORTHO05D008831 9.5e-278 959.9 627 74.6
QL06p006121 Quercus lobata HOM05D002762 ORTHO05D008831 1.1e-276 956.4 627 74.2
CAN.G889.17 Capsicum annuum HOM05D002762 ORTHO05D008831 3.4e-275 951.4 629 74.1
Solyc01g080360.3 Solanum lycopersicum HOM05D002762 ORTHO05D008831 4.4e-275 951.0 627 74.0
Sopen01g032170 Solanum pennellii HOM05D002762 ORTHO05D008831 7.5e-275 950.3 627 73.8
Rhsim04G0212200 Rhododendron simsii HOM05D002762 ORTHO05D008831 8.3e-274 946.8 628 73.6
Ciclev10004552m.g Citrus clementina HOM05D002762 ORTHO05D008831 5.4e-273 944.1 632 73.1
MSTRG.3975 Avicennia marina HOM05D002762 ORTHO05D008831 2.7e-272 941.8 627 73.0
TAR365G0003 Trochodendron aralioides HOM05D002762 ORTHO05D008831 3.0e-271 938.3 628 72.8
GSVIVG01017858001 Vitis vinifera HOM05D002762 ORTHO05D008831 1.1e-270 936.4 629 73.8
Thecc.04G271400 Theobroma cacao HOM05D002762 ORTHO05D008831 2.4e-268 928.7 632 72.9
Haze_01004 Corylus avellana HOM05D002762 ORTHO05D008831 2.6e-267 925.2 675 68.7
CSS0031724 Camellia sinensis var. sinensis HOM05D002762 ORTHO05D008831 3.4e-267 924.9 609 74.1
Migut.G00245 Erythranthe guttata HOM05D002762 ORTHO05D008831 6.4e-266 920.6 630 70.3
SGA_v2.0_scaffold237G43848 Striga asiatica HOM05D002762 ORTHO05D008831 3.2e-265 918.3 632 71.8
Migut.G00243 Erythranthe guttata HOM05D002762 ORTHO05D008831 4.2e-265 917.9 630 70.2
DCAR_030580 Daucus carota HOM05D002762 ORTHO05D008831 6.0e-264 914.1 622 72.3
TWI53G0007 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 6.0e-264 914.1 628 71.8
MBI19_g15847_MAGBIO Magnolia biondii HOM05D002762 ORTHO05D008831 1.0e-263 913.3 630 71.4
Duzib052G0147 Durio zibethinus HOM05D002762 ORTHO05D008831 3.9e-263 911.4 632 71.7
Gohir.D09G232800 Gossypium hirsutum HOM05D002762 ORTHO05D008831 5.1e-263 911.0 632 70.7
Gohir.A09G231700 Gossypium hirsutum HOM05D002762 ORTHO05D008831 8.7e-263 910.2 632 70.9
Gorai.006G255700 Gossypium raimondii HOM05D002762 ORTHO05D008831 8.7e-263 910.2 632 70.7
Nitab4.5_0000894g0020 Nicotiana tabacum HOM05D002762 ORTHO05D008831 1.1e-262 909.8 603 72.8
CANSAT78G1603 Cannabis sativa HOM05D002762 ORTHO05D008831 1.5e-262 909.4 634 69.7
Duzib212G0752 Durio zibethinus HOM05D002762 ORTHO05D008831 2.8e-261 905.2 626 71.4
MD16G1180200 Malus domestica HOM05D002762 ORTHO05D008831 5.8e-259 897.5 632 68.7
RcHm_v2.0_Chr4g0419641 Rosa chinensis HOM05D002762 ORTHO05D008831 9.9e-259 896.7 634 70.3
FvH4_4g14000 Fragaria vesca HOM05D002762 ORTHO05D008831 3.8e-258 894.8 630 70.3
vmacro08246 Vaccinium macrocarpon HOM05D002762 ORTHO05D008831 1.9e-257 892.5 656 69.1
Oeu035631.1 Olea europaea HOM05D002762 ORTHO05D008831 9.3e-257 890.2 609 72.9
Potri.010G028600 Populus trichocarpa HOM05D002762 ORTHO05D008831 1.6e-256 889.4 636 67.6
FAN12G0174 Fragaria x ananassa HOM05D002762 ORTHO05D008831 2.1e-256 889.0 627 70.0
Lj6A665G69 Lonicera japonica HOM05D002762 ORTHO05D008831 2.7e-256 888.6 663 67.9
FAN22G0551 Fragaria x ananassa HOM05D002762 ORTHO05D008831 3.9e-255 884.8 630 69.4
Aqoxy5G00558 Aquilegia oxysepala HOM05D002762 ORTHO05D008831 2.5e-254 882.1 629 68.0
Sc19g0004720 Simmondsia chinensis HOM05D002762 ORTHO05D008831 3.3e-254 881.7 634 69.9
ATR0626G043 Amborella trichopoda HOM05D002762 ORTHO05D008831 5.6e-254 880.9 636 68.7
Phvul.003G097700 Phaseolus vulgaris HOM05D002762 ORTHO05D008831 1.6e-253 879.4 628 67.5
Manes.03G187600 Manihot esculenta HOM05D002762 ORTHO05D008831 2.1e-253 879.0 609 70.3
ClCG06G005650 Citrullus lanatus HOM05D002762 ORTHO05D008831 6.2e-253 877.5 627 68.9
FAN07G1246 Fragaria x ananassa HOM05D002762 ORTHO05D008831 1.1e-252 876.7 630 69.2
Glyma.17G019900 Glycine max HOM05D002762 ORTHO05D008831 4.0e-252 874.8 625 67.2
VMungo1215G1507 Vigna mungo HOM05D002762 ORTHO05D008831 4.0e-252 874.8 625 67.2
Hund09035 Selenicereus undatus HOM05D002762 ORTHO05D008831 1.2e-251 873.2 631 69.1
COL.COLO4_13977 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.5e-251 872.8 632 69.8
Peaxi162Scf00095g00610 Petunia axillaris HOM05D002762 ORTHO05D008831 4.9e-250 867.8 580 73.1
Lj4g0021299 Lotus japonicus HOM05D002762 ORTHO05D008831 5.4e-249 864.4 627 66.3
Nitab4.5_0000059g0110 Nicotiana tabacum HOM05D002762 ORTHO05D008831 9.3e-249 863.6 568 72.9
Nn4g26133 Nelumbo nucifera HOM05D002762 ORTHO05D008831 2.1e-248 862.4 598 70.7
HanXRQChr07g0192681 Helianthus annuus HOM05D002762 ORTHO05D008831 7.9e-248 860.5 622 69.5
CsaV3_6G005500 Cucumis sativus L. HOM05D002762 ORTHO05D008831 1.0e-247 860.1 627 67.8
EL10Ac8g18297 Beta vulgaris HOM05D002762 ORTHO05D008831 3.0e-247 858.6 632 67.4
Psat4g031200 Pisum sativum HOM05D002762 ORTHO05D008831 5.1e-247 857.8 623 66.1
Sabra10G0012300 Salix brachista HOM05D002762 ORTHO05D008831 1.5e-246 856.3 613 67.7
AUR62033230 Chenopodium quinoa HOM05D002762 ORTHO05D008831 7.4e-246 854.0 629 67.7
CiPaw.01G157200 Carya illinoinensis HOM05D002762 ORTHO05D008831 9.6e-246 853.6 573 71.6
Ca_21567_v3 Cicer arietinum L. HOM05D002762 ORTHO05D008831 1.3e-245 853.2 623 66.5
Lalb_Chr07g0177471 Lupinus albus HOM05D002762 ORTHO05D008831 2.8e-245 852.0 631 65.5
TPR.G28123 Trifolium pratense HOM05D002762 ORTHO05D008831 2.8e-245 852.0 625 65.9
THA.LOC104802606 Tarenaya hassleriana HOM05D002762 ORTHO05D008831 4.8e-245 851.3 632 66.6
Medtr4g118010 Medicago truncatula HOM05D002762 ORTHO05D008831 1.1e-244 850.1 623 65.7
arahy.Tifrunner.gnm1.ann1.08LYWQ Arachis hypogaea HOM05D002762 ORTHO05D008831 1.4e-244 849.7 628 66.4
PSO210G2175 Papaver somniferum HOM05D002762 ORTHO05D008831 5.8e-243 844.3 624 66.3
PSO832G0886 Papaver somniferum HOM05D002762 ORTHO05D008831 3.8e-242 841.6 624 66.0
Eucgr.F00974 Eucalyptus grandis HOM05D002762 ORTHO05D008831 1.4e-241 839.7 592 68.6
ECA233G1162 Erigeron canadensis HOM05D002762 ORTHO05D008831 4.2e-241 838.2 622 67.7
Lsat_1_v5_gn_6_14820 Lactuca sativa HOM05D002762 ORTHO05D008831 3.5e-240 835.1 619 66.4
AT2G20790 Arabidopsis thaliana HOM05D002762 ORTHO05D008831 7.9e-240 833.9 625 65.1
AL3G53900 Arabidopsis lyrata HOM05D002762 ORTHO05D008831 6.2e-237 824.3 629 63.9
CARHR111460 Cardamine hirsuta HOM05D002762 ORTHO05D008831 8.2e-237 823.9 626 65.0
Aa31LG8G17700 Aethionema arabicum HOM05D002762 ORTHO05D008831 1.1e-236 823.5 630 65.1
Sed0011257 Sechium edule HOM05D002762 ORTHO05D008831 1.2e-235 820.1 627 65.9
Sp6g27240 Schrenkiella parvula HOM05D002762 ORTHO05D008831 7.6e-235 817.4 632 63.6
arahy.Tifrunner.gnm1.ann1.ZAIR7G Arachis hypogaea HOM05D002762 ORTHO05D008831 7.1e-233 810.8 618 64.7
C03p09290 Brassica napus HOM05D002762 ORTHO05D008831 1.0e-231 807.0 628 62.7
BolC3t13425H Brassica oleracea HOM05D002762 ORTHO05D008831 3.0e-231 805.4 628 62.9
HPP92_018399 Vanilla planifolia HOM05D002762 ORTHO05D008831 1.6e-229 799.7 629 63.8
AUR62021313 Chenopodium quinoa HOM05D002762 ORTHO05D008831 6.3e-229 797.7 589 67.6
A03p08030 Brassica napus HOM05D002762 ORTHO05D008831 1.4e-228 796.6 630 63.2
BraA03t10129Z Brassica rapa HOM05D002762 ORTHO05D008831 1.4e-228 796.6 630 63.2
Thhalv10003762m.g Eutrema salsugineum HOM05D002762 ORTHO05D008831 1.8e-228 796.2 627 62.2
CDE11G0719 Ceratophyllum demersum HOM05D002762 ORTHO05D008831 2.3e-223 779.2 627 62.2
Sed0022901 Sechium edule HOM05D002762 ORTHO05D008831 7.4e-222 774.2 627 63.6
unitig_899.g14405 Utricularia gibba HOM05D002762 ORTHO05D008831 1.2e-219 766.9 600 63.7
Carub.0003s3536 Capsella rubella HOM05D002762 ORTHO05D008831 6.5e-218 761.1 562 64.9
Zm00001eb410820 Zea mays HOM05D002762 ORTHO05D008831 2.0e-214 749.6 628 59.7
Prupe.1G147800 Prunus persica HOM05D002762 ORTHO05D008831 6.5e-210 734.6 629 58.3
Dinv38356 Davidia involucrata HOM05D002762 ORTHO05D008831 3.1e-188 662.5 450 73.3
SMO115G0172 Selaginella moellendorffii HOM05D002762 ORTHO05D008831 6.3e-181 638.3 630 50.0
MELO3C021387.2 Cucumis melo HOM05D002762 ORTHO05D008831 1.4e-180 637.1 451 69.8
Ah.09g229990 Amaranthus hybridus HOM05D002762 ORTHO05D008831 6.6e-178 628.2 453 70.2
SEGI_30175 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.5e-177 627.1 492 63.0
Mapoly0055s0097 Marchantia polymorpha HOM05D002762 ORTHO05D008831 4.7e-176 622.1 641 50.9
Nn1g08335 Nelumbo nucifera HOM05D002762 ORTHO05D008831 1.1e-164 584.3 416 69.5
Cfa015544 Carpinus fangiana HOM05D002762 ORTHO05D008831 2.4e-164 583.2 398 72.1
AagrBONN_evm.TU.Sc2ySwM_368.1411 Anthoceros agrestis HOM05D002762 ORTHO05D008831 1.4e-148 530.8 597 46.4
Pp3c2_12250 Physcomitrium patens HOM05D002762 ORTHO05D008831 1.3e-144 517.7 632 44.8
Eucgr.B01191 Eucalyptus grandis HOM05D002762 ORTHO05D008831 5.4e-140 502.3 415 61.0
SEGI_25743 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 1.6e-139 500.7 400 63.2
Cpa.g.sc16.61 Carica papaya HOM05D002762 ORTHO05D008831 1.6e-123 447.6 604 44.0
MD13G1179200 Malus domestica HOM05D002762 ORTHO05D008831 3.4e-118 429.9 421 56.8
CBR_g19730 Chara braunii HOM05D002762 ORTHO05D008831 2.8e-112 410.2 773 34.5
Actinidia23461 Actinidia chinensis HOM05D002762 ORTHO05D008831 8.5e-109 398.7 270 73.7
BcaB01g05249 Brassica carinata HOM05D002762 ORTHO05D008831 1.9e-52 211.5 181 55.8
Os12g0528300 Oryza sativa ssp. japonica HOM05D002762 ORTHO05D008831 1.8e-50 204.9 173 59.0
MD12G1098800 Malus domestica HOM05D002762 ORTHO05D008831 1.2e-41 175.6 211 42.2
SEGI_28752 Sequoiadendron giganteum HOM05D002762 ORTHO05D008831 9.9e-41 172.6 153 57.5
MD12G1098700 Malus domestica HOM05D002762 ORTHO05D008831 3.2e-39 167.5 163 54.0
Actinidia23460 Actinidia chinensis HOM05D002762 ORTHO05D030920 1.4e-31 142.1 82 81.7
VMungo1215G0498 Vigna mungo HOM05D002762 ORTHO05D008831 1.2e-22 112.5 89 65.2
FAN17G1900 Fragaria x ananassa HOM05D002762 ORTHO05D030920 7.6e-17 93.2 81 59.3
COL.COLO4_28661 Corchorus olitorius HOM05D002762 ORTHO05D008831 1.4e-15 89.0 90 55.6
TWI09G1537 Tripterygium wilfordii HOM05D002762 ORTHO05D008831 5.8e-09 67.0 47 66.0
Glyma.07G254400 Glycine max HOM05D002762 ORTHO05D004643 1.1e-07 62.8 47 63.8
MD13G1179000 Malus domestica HOM05D002762 ORTHO05D030920 1.4e-07 62.4 38 71.1
SMO165G0130 Selaginella moellendorffii HOM05D000740 ORTHO05D007141 9.3e-07 59.7 216 28.2


User provided reference genes

Program Settings