Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g31840 Coffea canephora HOM05D005810 ORTHO05D007279 3.5e-132 474.9 238 100.0
Cpa.g.sc117.72 Carica papaya HOM05D005810 ORTHO05D007279 2.0e-58 229.9 202 60.9
Nitab4.5_0005059g0010 Nicotiana tabacum HOM05D005810 ORTHO05D007279 2.9e-57 226.1 202 60.4
QL03p024871 Quercus lobata HOM05D005810 ORTHO05D007279 2.9e-57 226.1 200 59.0
Dinv13660 Davidia involucrata HOM05D005810 ORTHO05D007279 1.6e-55 220.3 204 57.8
CSS0013071 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 2.0e-55 219.9 203 60.6
CSS0027419 Camellia sinensis var. sinensis HOM05D005810 ORTHO05D007279 3.0e-54 216.1 203 60.1
Cfa006452 Carpinus fangiana HOM05D005810 ORTHO05D007279 1.1e-53 214.2 200 58.5
CAN.G134.120 Capsicum annuum HOM05D005810 ORTHO05D007279 2.5e-53 213.0 196 60.2
Potri.005G051400 Populus trichocarpa HOM05D005810 ORTHO05D007279 4.3e-53 212.2 200 55.5
GSVIVG01021833001 Vitis vinifera HOM05D005810 ORTHO05D007279 4.3e-53 212.2 201 59.7
Eucgr.B01694 Eucalyptus grandis HOM05D005810 ORTHO05D007279 2.8e-52 209.5 205 52.2
COL.COLO4_15299 Corchorus olitorius HOM05D005810 ORTHO05D007279 3.6e-52 209.1 207 55.1
Migut.B01074 Erythranthe guttata HOM05D005810 ORTHO05D007279 3.6e-52 209.1 207 56.0
Duzib177G1000 Durio zibethinus HOM05D005810 ORTHO05D007279 1.1e-51 207.6 210 53.3
CANSAT54G2140 Cannabis sativa HOM05D005810 ORTHO05D007279 5.2e-51 205.3 204 56.4
Lj7C488G4 Lonicera japonica HOM05D005810 ORTHO05D007279 5.2e-51 205.3 200 57.0
MD04G1221700 Malus domestica HOM05D005810 ORTHO05D007279 5.2e-51 205.3 203 56.7
Haze_04340 Corylus avellana HOM05D005810 ORTHO05D007279 2.0e-50 203.4 196 57.1
Phvul.006G100200 Phaseolus vulgaris HOM05D005810 ORTHO05D007279 3.4e-50 202.6 214 54.7
Aa31LG5G15210 Aethionema arabicum HOM05D005810 ORTHO05D007279 4.4e-50 202.2 200 54.5
MELO3C024669.2 Cucumis melo HOM05D005810 ORTHO05D007279 5.8e-50 201.8 199 54.8
AT3G04820 Arabidopsis thaliana HOM05D005810 ORTHO05D007279 7.5e-50 201.4 200 54.0
Eucgr.B02108 Eucalyptus grandis HOM05D005810 ORTHO05D007279 9.8e-50 201.1 207 50.7
RcHm_v2.0_Chr3g0451831 Rosa chinensis HOM05D005810 ORTHO05D007279 9.8e-50 201.1 202 56.9
Prupe.6G340900 Prunus persica HOM05D005810 ORTHO05D007279 1.3e-49 200.7 202 56.4
Sed0015078 Sechium edule HOM05D005810 ORTHO05D007279 1.3e-49 200.7 201 53.2
CARHR079070 Cardamine hirsuta HOM05D005810 ORTHO05D007279 2.2e-49 199.9 204 54.9
Nitab4.5_0005729g0070 Nicotiana tabacum HOM05D005810 ORTHO05D007279 2.2e-49 199.9 203 54.7
AL3G14980 Arabidopsis lyrata HOM05D005810 ORTHO05D007279 3.7e-49 199.1 210 53.3
FvH4_6g03330 Fragaria vesca HOM05D005810 ORTHO05D007279 3.7e-49 199.1 202 56.4
VMungo0222G0001 Vigna mungo HOM05D005810 ORTHO05D007279 6.4e-49 198.4 208 54.8
Aqoxy5G00419 Aquilegia oxysepala HOM05D005810 ORTHO05D007279 8.3e-49 198.0 205 55.6
BcaB04g19298 Brassica carinata HOM05D005810 ORTHO05D007279 1.9e-48 196.8 200 54.5
Medtr7g114850 Medicago truncatula HOM05D005810 ORTHO05D007279 1.9e-48 196.8 199 53.8
Thecc.05G287300 Theobroma cacao HOM05D005810 ORTHO05D007279 2.4e-48 196.4 205 53.7
arahy.Tifrunner.gnm1.ann1.BBX725 Arachis hypogaea HOM05D005810 ORTHO05D007279 3.2e-48 196.1 203 53.2
Glyma.03G245900 Glycine max HOM05D005810 ORTHO05D007279 3.2e-48 196.1 204 54.4
PSO210G1835 Papaver somniferum HOM05D005810 ORTHO05D007279 3.2e-48 196.1 205 53.2
Lalb_Chr18g0045021 Lupinus albus HOM05D005810 ORTHO05D007279 4.1e-48 195.7 205 53.2
BcaC01g04347 Brassica carinata HOM05D005810 ORTHO05D007279 5.4e-48 195.3 200 53.0
BolC3t16404H Brassica oleracea HOM05D005810 ORTHO05D007279 5.4e-48 195.3 200 53.0
Sp3g03650 Schrenkiella parvula HOM05D005810 ORTHO05D007279 5.4e-48 195.3 200 52.5
arahy.Tifrunner.gnm1.ann1.E80190 Arachis hypogaea HOM05D005810 ORTHO05D007279 9.2e-48 194.5 203 52.7
Carub.0003s0400 Capsella rubella HOM05D005810 ORTHO05D007279 9.2e-48 194.5 204 53.4
BraA03t12559Z Brassica rapa HOM05D005810 ORTHO05D007279 1.2e-47 194.1 200 52.0
Glyma.19G243400 Glycine max HOM05D005810 ORTHO05D007279 1.6e-47 193.7 204 54.9
THA.LOC104821678 Tarenaya hassleriana HOM05D005810 ORTHO05D007279 2.1e-47 193.4 201 51.7
Ciclev10003382m.g Citrus clementina HOM05D005810 ORTHO05D007279 2.7e-47 193.0 203 54.2
PSO832G3650 Papaver somniferum HOM05D005810 ORTHO05D007279 2.7e-47 193.0 211 52.1
DCAR_006618 Daucus carota HOM05D005810 ORTHO05D007279 3.5e-47 192.6 204 51.5
TPR.G6991 Trifolium pratense HOM05D005810 ORTHO05D007279 4.6e-47 192.2 208 52.9
Gohir.A11G254200 Gossypium hirsutum HOM05D005810 ORTHO05D007279 1.0e-46 191.0 204 51.5
TAR365G0727 Trochodendron aralioides HOM05D005810 ORTHO05D007279 1.0e-46 191.0 196 54.6
Ca_09411_v3 Cicer arietinum L. HOM05D005810 ORTHO05D007279 1.7e-46 190.3 211 51.7
ClCG06G009190 Citrullus lanatus HOM05D005810 ORTHO05D007279 1.7e-46 190.3 199 52.3
Gorai.007G284000 Gossypium raimondii HOM05D005810 ORTHO05D007279 1.7e-46 190.3 205 50.7
PGR031G1118 Punica granatum HOM05D005810 ORTHO05D007279 1.7e-46 190.3 196 53.1
SalBow8G0563 Salvia bowleyana HOM05D005810 ORTHO05D007279 2.3e-46 189.9 206 52.9
Lj1g0027742 Lotus japonicus HOM05D005810 ORTHO05D007279 5.1e-46 188.7 202 52.0
Psat3g008040 Pisum sativum HOM05D005810 ORTHO05D007279 6.6e-46 188.3 203 52.2
ATR0665G477 Amborella trichopoda HOM05D005810 ORTHO05D007279 8.6e-46 188.0 200 52.5
Oeu060673.3 Olea europaea HOM05D005810 ORTHO05D007279 1.1e-45 187.6 216 51.4
Gohir.D11G264000 Gossypium hirsutum HOM05D005810 ORTHO05D007279 7.3e-45 184.9 204 50.0
HanXRQChr12g0379621 Helianthus annuus HOM05D005810 ORTHO05D007279 3.6e-44 182.6 200 49.5
C03p41160 Brassica napus HOM05D005810 ORTHO05D007279 6.2e-44 181.8 194 51.5
ECA232G3974 Erigeron canadensis HOM05D005810 ORTHO05D007279 1.1e-43 181.0 200 51.0
A03p33850 Brassica napus HOM05D005810 ORTHO05D007279 1.4e-43 180.6 194 50.5
HPP92_028013 Vanilla planifolia HOM05D005810 ORTHO05D007279 1.4e-43 180.6 200 50.0
Thhalv10022286m.g Eutrema salsugineum HOM05D005810 ORTHO05D007279 4.0e-43 179.1 194 51.5
EL10Ac4g09107 Beta vulgaris HOM05D005810 ORTHO05D007279 5.2e-43 178.7 192 52.1
unitig_37.g12634 Utricularia gibba HOM05D005810 ORTHO05D007279 6.8e-43 178.3 205 49.3
AUR62004921 Chenopodium quinoa HOM05D005810 ORTHO05D007279 1.5e-42 177.2 192 51.6
Ah.06g192190 Amaranthus hybridus HOM05D005810 ORTHO05D007279 4.4e-42 175.6 205 50.2
AUR62001034 Chenopodium quinoa HOM05D005810 ORTHO05D007279 4.9e-41 172.2 192 49.5
Atru.chr2.785 Acer truncatum HOM05D005810 ORTHO05D007279 1.2e-39 167.5 134 58.2
Rhsim05G0160900 Rhododendron simsii HOM05D005810 ORTHO05D007279 4.6e-39 165.6 208 49.0
Zm00001eb328420 Zea mays HOM05D005810 ORTHO05D007279 6.0e-39 165.2 220 42.7
CDE05G3473 Ceratophyllum demersum HOM05D005810 ORTHO05D007279 7.8e-39 164.9 199 47.7
AagrBONN_evm.TU.Sc2ySwM_362.2882 Anthoceros agrestis HOM05D005810 ORTHO05D007279 5.6e-37 158.7 206 45.1
vmacro14215 Vaccinium macrocarpon HOM05D005810 ORTHO05D007279 3.6e-36 156.0 279 39.8
MD12G1237800 Malus domestica HOM05D005810 ORTHO05D007279 3.4e-34 149.4 131 56.5
Peaxi162Scf00282g00136 Petunia axillaris HOM05D005810 ORTHO05D007279 5.8e-34 148.7 195 48.7
MBI11_g10322_MAGBIO Magnolia biondii HOM05D005810 ORTHO05D007279 3.8e-33 146.0 214 44.4
Mapoly0092s0013 Marchantia polymorpha HOM05D005810 ORTHO05D007279 4.9e-33 145.6 199 43.7
Pp3c18_8560 Physcomitrium patens HOM05D005810 ORTHO05D007279 9.2e-32 141.4 199 41.7
Hund06958 Selenicereus undatus HOM05D005810 ORTHO05D007279 1.6e-31 140.6 200 46.5
Sopen01g041220 Solanum pennellii HOM05D005810 ORTHO05D007279 4.3e-29 132.5 140 56.4
SMO351G0210 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 7.3e-29 131.7 199 38.2
ClCG06G009160 Citrullus lanatus HOM05D005810 ORTHO05D007279 1.1e-27 127.9 150 46.7
Hma1.2p1_0083F.1_g042850 Hydrangea macrophylla HOM05D005810 ORTHO05D007279 4.0e-27 125.9 140 53.6
CsaV3_UNG004060 Cucumis sativus L. HOM05D005810 ORTHO05D007279 9.0e-27 124.8 147 47.6
FAN09G1409 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.1e-24 117.9 156 49.4
CBR_g36821 Chara braunii HOM05D005810 ORTHO05D007279 4.6e-23 112.5 119 43.7
Lsat_1_v5_gn_5_37760 Lactuca sativa HOM05D005810 ORTHO05D007279 1.3e-22 110.9 79 62.0
MCO09G788 Micromonas commoda HOM05D005810 ORTHO05D007279 2.3e-22 110.2 196 34.7
CsaV3_1G045610 Cucumis sativus L. HOM05D005810 ORTHO05D007279 6.6e-22 108.6 139 44.6
PRCOL_00005025 Prasinoderma coloniale HOM05D005810 ORTHO05D007279 4.5e-18 95.9 224 30.4
SMO364G0521 Selaginella moellendorffii HOM05D005810 ORTHO05D007279 2.9e-17 93.2 166 35.5
FAN05G1843 Fragaria x ananassa HOM05D005810 ORTHO05D007279 1.6e-15 87.4 203 36.5
Cre01.g007651 Chlamydomonas reinhardtii HOM05D005810 ORTHO05D007279 1.5e-10 70.9 211 27.0
CiPaw.07G064900 Carya illinoinensis HOM05D005810 ORTHO05D007279 3.2e-08 63.2 35 91.4
Manes.08G132300 Manihot esculenta HOM05D005810 ORTHO05D007279 3.2e-08 63.2 41 70.7
CsaV3_UNG004080 Cucumis sativus L. HOM05D005810 ORTHO05D007279 1.6e-07 60.8 48 58.3
CiPaw.07G064800 Carya illinoinensis HOM05D005810 ORTHO05D007279 2.7e-07 60.1 43 60.5


User provided reference genes

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