Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g28820 Coffea canephora HOM05D002214 ORTHO05D007367 0.0e+00 1082.4 531 100.0
Hma1.2p1_0685F.1_g203260 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 1.2e-151 540.8 527 53.9
CAN.G909.6 Capsicum annuum HOM05D002214 ORTHO05D007367 1.7e-150 537.0 523 54.7
Rhsim07G0058900 Rhododendron simsii HOM05D002214 ORTHO05D007367 3.2e-149 532.7 527 51.8
Sopen01g034840 Solanum pennellii HOM05D002214 ORTHO05D007367 4.2e-149 532.3 526 54.0
Solyc01g087910.4 Solanum lycopersicum HOM05D002214 ORTHO05D007367 2.1e-148 530.0 512 54.5
vmacro13697 Vaccinium macrocarpon HOM05D002214 ORTHO05D007367 1.1e-144 517.7 565 49.4
SGA_v2.0_scaffold5G02954 Striga asiatica HOM05D002214 ORTHO05D007367 5.3e-144 515.4 527 52.4
Migut.N01800 Erythranthe guttata HOM05D002214 ORTHO05D007367 3.4e-143 512.7 538 51.7
Actinidia19424 Actinidia chinensis HOM05D002214 ORTHO05D007367 3.2e-141 506.1 526 49.4
Ciclev10031605m.g Citrus clementina HOM05D002214 ORTHO05D007367 1.3e-137 494.2 527 48.4
GSVIVG01032215001 Vitis vinifera HOM05D002214 ORTHO05D007367 3.1e-136 489.6 520 49.4
CiPaw.14G003400 Carya illinoinensis HOM05D002214 ORTHO05D007367 1.5e-135 487.3 527 49.0
CSS0000146 Camellia sinensis var. sinensis HOM05D002214 ORTHO05D007367 1.4e-133 480.7 529 47.3
TWI09G0406 Tripterygium wilfordii HOM05D002214 ORTHO05D007367 7.1e-133 478.4 528 47.7
Potri.009G056500 Populus trichocarpa HOM05D002214 ORTHO05D007367 2.1e-132 476.9 524 47.9
Gohir.A08G142300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 4.6e-132 475.7 507 47.1
Manes.07G010800 Manihot esculenta HOM05D002214 ORTHO05D007367 7.9e-132 474.9 518 47.9
CANSAT80G0536 Cannabis sativa HOM05D002214 ORTHO05D007367 1.3e-131 474.2 526 46.8
Duzib138G1340 Durio zibethinus HOM05D002214 ORTHO05D007367 3.9e-131 472.6 509 47.5
Gorai.004G170100 Gossypium raimondii HOM05D002214 ORTHO05D007367 1.9e-130 470.3 506 46.6
Peaxi162Scf01270g00126 Petunia axillaris HOM05D002214 ORTHO05D007367 3.3e-130 469.5 541 49.5
FAN03G2729 Fragaria x ananassa HOM05D002214 ORTHO05D007367 6.2e-129 465.3 536 45.7
Nitab4.5_0001244g0060 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.4e-128 464.2 511 50.9
RcHm_v2.0_Chr1g0318361 Rosa chinensis HOM05D002214 ORTHO05D007367 1.8e-128 463.8 524 46.0
Cfa010812 Carpinus fangiana HOM05D002214 ORTHO05D007367 4.0e-128 462.6 505 47.5
FAN10G2270 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.0e-127 460.3 536 45.5
Nn7g36334 Nelumbo nucifera HOM05D002214 ORTHO05D007367 2.2e-126 456.8 504 46.8
Thecc.01G406200 Theobroma cacao HOM05D002214 ORTHO05D007367 8.4e-126 454.9 526 45.6
Sc11g0009040 Simmondsia chinensis HOM05D002214 ORTHO05D007367 2.7e-124 449.9 511 44.6
Eucgr.G03320 Eucalyptus grandis HOM05D002214 ORTHO05D007367 7.9e-124 448.4 511 46.2
Eucgr.G03301 Eucalyptus grandis HOM05D002214 ORTHO05D007367 2.3e-123 446.8 526 45.1
Aqoxy2G00221 Aquilegia oxysepala HOM05D002214 ORTHO05D007367 3.9e-123 446.0 509 44.0
unitig_22.g5896 Utricularia gibba HOM05D002214 ORTHO05D007367 1.1e-122 444.5 513 45.6
MD07G1023200 Malus domestica HOM05D002214 ORTHO05D007367 2.8e-121 439.9 530 45.3
AUR62023095 Chenopodium quinoa HOM05D002214 ORTHO05D007367 8.2e-121 438.3 513 43.5
CsaV3_7G030710 Cucumis sativus L. HOM05D002214 ORTHO05D007367 2.6e-119 433.3 534 43.6
THA.LOC104817574 Tarenaya hassleriana HOM05D002214 ORTHO05D007367 4.5e-119 432.6 527 44.8
AT3G52030 Arabidopsis thaliana HOM05D002214 ORTHO05D007367 7.6e-119 431.8 512 44.5
Lsat_1_v5_gn_7_35840 Lactuca sativa HOM05D002214 ORTHO05D007367 2.2e-118 430.3 530 45.1
AL5G32570 Arabidopsis lyrata HOM05D002214 ORTHO05D007367 2.9e-118 429.9 512 43.9
Prupe.2G024000 Prunus persica HOM05D002214 ORTHO05D007367 2.9e-118 429.9 528 43.6
BolC7t45191H Brassica oleracea HOM05D002214 ORTHO05D007367 8.5e-118 428.3 512 43.6
DCAR_022375 Daucus carota HOM05D002214 ORTHO05D007367 8.5e-118 428.3 533 44.1
Sp5g10260 Schrenkiella parvula HOM05D002214 ORTHO05D007367 2.5e-117 426.8 513 44.2
CARHR161660 Cardamine hirsuta HOM05D002214 ORTHO05D007367 7.2e-117 425.2 511 43.4
Sed0008197 Sechium edule HOM05D002214 ORTHO05D007367 1.6e-116 424.1 535 43.4
PGR031G3638 Punica granatum HOM05D002214 ORTHO05D007367 2.1e-116 423.7 511 44.4
C07p46730 Brassica napus HOM05D002214 ORTHO05D007367 2.7e-116 423.3 512 43.6
Thhalv10010397m.g Eutrema salsugineum HOM05D002214 ORTHO05D007367 1.3e-115 421.0 512 43.4
TAR633G1256 Trochodendron aralioides HOM05D002214 ORTHO05D007367 3.0e-115 419.9 471 47.1
A03p48610 Brassica napus HOM05D002214 ORTHO05D007367 5.1e-115 419.1 512 43.2
BcaC06g33377 Brassica carinata HOM05D002214 ORTHO05D007367 6.7e-115 418.7 512 43.0
BcaC06g33020 Brassica carinata HOM05D002214 ORTHO05D007367 1.1e-114 417.9 512 42.8
QL04p010195 Quercus lobata HOM05D002214 ORTHO05D007367 1.1e-114 417.9 530 44.3
Lj3g0007976 Lotus japonicus HOM05D002214 ORTHO05D007367 3.3e-114 416.4 528 43.2
Carub.0005s1835 Capsella rubella HOM05D002214 ORTHO05D007367 8.2e-113 411.8 526 41.8
Nitab4.5_0008942g0050 Nicotiana tabacum HOM05D002214 ORTHO05D007367 1.8e-112 410.6 516 46.1
BraA03t13966Z Brassica rapa HOM05D002214 ORTHO05D007367 2.6e-111 406.8 497 43.3
arahy.Tifrunner.gnm1.ann1.IP56PK Arachis hypogaea HOM05D002214 ORTHO05D007367 3.8e-110 402.9 511 42.3
ECA236G0637 Erigeron canadensis HOM05D002214 ORTHO05D001664 1.4e-109 401.0 511 43.2
arahy.Tifrunner.gnm1.ann1.KRTV89 Arachis hypogaea HOM05D002214 ORTHO05D007367 5.5e-109 399.1 511 42.1
PSO339G3363 Papaver somniferum HOM05D002214 ORTHO05D007367 2.1e-108 397.1 528 42.2
Lalb_Chr25g0282551 Lupinus albus HOM05D002214 ORTHO05D007367 1.4e-107 394.4 534 40.6
Psat5g212440 Pisum sativum HOM05D002214 ORTHO05D007367 1.4e-107 394.4 528 40.9
Medtr3g034210 Medicago truncatula HOM05D002214 ORTHO05D007367 2.3e-107 393.7 509 41.5
Glyma.11G159230 Glycine max HOM05D002214 ORTHO05D007367 3.9e-107 392.9 510 41.8
Ca_24837_v3 Cicer arietinum L. HOM05D002214 ORTHO05D007367 2.0e-106 390.6 529 40.3
Atru.chr11.2515 Acer truncatum HOM05D002214 ORTHO05D007367 5.7e-106 389.0 516 42.1
Oeu051405.1 Olea europaea HOM05D002214 ORTHO05D007367 1.3e-105 387.9 407 51.1
PSO384G3385 Papaver somniferum HOM05D002214 ORTHO05D007367 2.8e-105 386.7 531 41.4
TPR.G14558 Trifolium pratense HOM05D002214 ORTHO05D007367 2.8e-105 386.7 510 40.8
Gohir.D08G163300 Gossypium hirsutum HOM05D002214 ORTHO05D007367 6.9e-104 382.1 405 47.7
Dinv07431 Davidia involucrata HOM05D002214 ORTHO05D005113 1.5e-103 380.9 405 50.4
Phvul.005G035100 Phaseolus vulgaris HOM05D002214 ORTHO05D007367 4.5e-103 379.4 529 40.1
VMungo1217G0001 Vigna mungo HOM05D002214 ORTHO05D007367 3.8e-102 376.3 532 40.4
Ah.16g100650 Amaranthus hybridus HOM05D002214 ORTHO05D007367 1.8e-99 367.5 450 43.1
Zm00001eb091260 Zea mays HOM05D002214 ORTHO05D007367 1.1e-98 364.8 512 38.7
FvH4_7g01770 Fragaria vesca HOM05D002214 ORTHO05D007367 1.5e-98 364.4 402 47.0
Os11g0182400 Oryza sativa ssp. japonica HOM05D002214 ORTHO05D007367 9.7e-98 361.7 508 38.2
MBI03_g28525_MAGBIO Magnolia biondii HOM05D002214 ORTHO05D007367 5.3e-96 355.9 527 38.7
HPP92_021380 Vanilla planifolia HOM05D002214 ORTHO05D007367 1.2e-95 354.8 510 38.6
ATR0782G063 Amborella trichopoda HOM05D002214 ORTHO05D007367 2.6e-95 353.6 516 39.3
EL10Ac2g04369 Beta vulgaris HOM05D002214 ORTHO05D007367 5.7e-90 335.9 513 36.8
SalBow6G2835 Salvia bowleyana HOM05D002214 ORTHO05D007367 1.2e-87 328.2 400 46.8
QL04p010150 Quercus lobata HOM05D002214 ORTHO05D007367 2.7e-87 327.0 440 41.6
ClCG09G004430 Citrullus lanatus HOM05D002214 ORTHO05D007367 1.7e-86 324.3 469 39.7
HanXRQChr04g0119861 Helianthus annuus HOM05D002214 ORTHO05D007367 4.4e-74 283.1 383 43.3
FAN24G1013 Fragaria x ananassa HOM05D002214 ORTHO05D007367 9.8e-74 282.0 553 35.1
FvH4_2g17890 Fragaria vesca HOM05D002214 ORTHO05D007367 2.2e-73 280.8 553 34.9
FAN15G3441 Fragaria x ananassa HOM05D002214 ORTHO05D007367 8.6e-70 268.9 551 34.1
AUR62009418 Chenopodium quinoa HOM05D002214 ORTHO05D007367 3.6e-68 263.5 513 30.8
FAN24G2408 Fragaria x ananassa HOM05D002214 ORTHO05D007367 4.7e-68 263.1 531 33.3
MELO3C023585.2 Cucumis melo HOM05D002214 ORTHO05D007367 3.4e-66 256.9 533 32.8
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 2.2e-65 254.2 334 41.9
FAN27G1816 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.1e-61 241.9 530 32.6
Haze_03149 Corylus avellana HOM05D002214 ORTHO05D007367 3.4e-58 230.3 488 32.6
Haze_03152 Corylus avellana HOM05D002214 ORTHO05D007367 3.4e-58 230.3 488 32.6
Cpa.g.sc125.50 Carica papaya HOM05D002214 ORTHO05D007367 6.4e-57 226.1 197 57.4
FAN06G2164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.2e-56 223.8 329 38.9
Hma1.2p1_0685F.1_g203270 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 2.5e-53 214.2 150 67.3
FAN27G1164 Fragaria x ananassa HOM05D002214 ORTHO05D007367 2.8e-52 210.7 509 33.0
Lj9A641T67 Lonicera japonica HOM05D002214 ORTHO05D007367 1.7e-49 201.4 282 40.8
Cpa.g.sc125.51 Carica papaya HOM05D002214 ORTHO05D007367 2.9e-49 200.7 310 39.0
CDE04G0429 Ceratophyllum demersum HOM05D002214 ORTHO05D007367 1.2e-47 195.3 193 49.7
RcHm_v2.0_Chr6g0283161 Rosa chinensis HOM05D002214 ORTHO05D007367 6.6e-46 189.5 404 34.4
Aa31LG10G14890 Aethionema arabicum HOM05D002214 ORTHO05D007367 1.5e-45 188.3 166 55.4
MD07G1016900 Malus domestica HOM05D002214 ORTHO05D007367 9.5e-45 185.7 226 47.3
QL04p010120 Quercus lobata HOM05D002214 ORTHO05D007367 3.4e-42 177.2 297 37.4
Hund16633 Selenicereus undatus HOM05D002214 ORTHO05D007367 3.4e-42 177.2 170 52.9
Hund16632 Selenicereus undatus HOM05D002214 ORTHO05D007367 1.9e-40 171.4 166 49.4
FvH4_2g17910 Fragaria vesca HOM05D002214 ORTHO05D007367 5.4e-40 169.9 232 44.4
FAN24G3278 Fragaria x ananassa HOM05D002214 ORTHO05D007367 5.4e-40 169.9 232 44.4
FAN06G4994 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.9e-38 163.7 135 58.5
AagrBONN_evm.TU.Sc2ySwM_344.2511 Anthoceros agrestis HOM05D002214 ORTHO05D007367 7.8e-31 139.4 289 31.1
COL.COLO4_12334 Corchorus olitorius HOM05D000031 ORTHO05D000030 1.3e-30 138.7 434 26.3
SEGI_30351 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 1.7e-30 138.3 140 48.6
Oeu016638.1 Olea europaea HOM05D002214 ORTHO05D007367 7.3e-29 132.9 107 60.7
Hma1.2p1_0685F.1_g203250 Hydrangea macrophylla HOM05D002214 ORTHO05D007367 5.3e-27 126.7 122 53.3
Aa31LG10G14900 Aethionema arabicum HOM05D002214 ORTHO05D007367 4.5e-26 123.6 117 50.4
Thecc.01G405800 Theobroma cacao HOM05D002214 ORTHO05D007367 1.1e-24 119.0 82 65.9
SEGI_07097 Sequoiadendron giganteum HOM05D002214 ORTHO05D007367 6.0e-23 113.2 136 43.4
Pp3c8_19810 Physcomitrium patens HOM05D002214 ORTHO05D007367 7.9e-23 112.8 258 27.9
Thecc.01G405700 Theobroma cacao HOM05D002214 ORTHO05D007367 9.6e-21 105.9 86 52.3
SMO137G0282 Selaginella moellendorffii HOM05D002214 ORTHO05D007367 1.5e-18 98.6 447 24.6
CBR_g46897 Chara braunii HOM05D002214 ORTHO05D007367 3.4e-18 97.4 464 21.8
Mapoly0009s0234 Marchantia polymorpha HOM05D002214 ORTHO05D007367 3.4e-18 97.4 409 23.2
Lj9C641T18 Lonicera japonica HOM05D002214 ORTHO05D007367 9.3e-16 89.4 100 48.0
FAN24G0587 Fragaria x ananassa HOM05D002214 ORTHO05D045595 7.6e-10 69.7 89 46.1
FAN27G0150 Fragaria x ananassa HOM05D002214 ORTHO05D007367 3.8e-09 67.4 111 35.1
FAN27G0866 Fragaria x ananassa HOM05D002214 ORTHO05D007367 1.0e-06 59.3 63 42.9


User provided reference genes

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