Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 4.0e-104 381.3 180 100.0
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 4.5e-87 324.7 175 84.0
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 5.5e-85 317.8 175 84.0
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 6.0e-84 314.3 175 84.6
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 6.0e-84 314.3 175 84.6
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 7.9e-84 313.9 176 83.5
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 1.8e-83 312.8 177 83.6
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 1.8e-83 312.8 175 84.0
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 6.7e-83 310.8 175 82.9
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 6.7e-83 310.8 175 81.7
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 6.7e-83 310.8 175 81.7
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 1.5e-82 309.7 176 83.0
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 1.9e-82 309.3 175 82.9
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 2.5e-82 308.9 176 83.0
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 2.5e-82 308.9 175 81.7
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 2.5e-82 308.9 175 81.7
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 3.3e-82 308.5 175 81.1
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 5.6e-82 307.8 175 81.1
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 9.6e-82 307.0 175 82.3
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 9.6e-82 307.0 176 83.0
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 1.3e-81 306.6 175 81.7
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 1.6e-81 306.2 175 81.7
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.6e-81 306.2 175 80.6
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 1.6e-81 306.2 176 81.2
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 2.8e-81 305.4 175 82.3
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 2.8e-81 305.4 175 81.1
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 3.7e-81 305.1 176 81.2
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 6.2e-81 304.3 175 82.3
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 8.1e-81 303.9 175 81.1
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 8.1e-81 303.9 175 79.4
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 8.1e-81 303.9 176 80.7
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 1.4e-80 303.1 175 78.9
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 9.0e-80 300.4 175 80.0
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 9.0e-80 300.4 175 80.0
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 1.5e-79 299.7 175 79.4
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.5e-79 299.7 175 79.4
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.5e-79 299.7 175 79.4
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 2.6e-79 298.9 175 80.6
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 2.6e-79 298.9 175 79.4
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 3.4e-79 298.5 175 78.9
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 1.0e-78 297.0 175 79.4
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 1.3e-78 296.6 175 78.9
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 2.2e-78 295.8 175 81.1
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 2.2e-78 295.8 175 78.3
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 2.9e-78 295.4 177 76.8
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 2.9e-78 295.4 176 78.4
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 2.9e-78 295.4 175 77.7
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 3.8e-78 295.0 176 76.1
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 4.9e-78 294.7 176 79.5
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 1.1e-77 293.5 175 78.3
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 1.1e-77 293.5 175 77.1
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 1.1e-77 293.5 196 74.0
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 1.4e-77 293.1 167 81.4
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 2.5e-77 292.4 185 77.3
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 3.2e-77 292.0 176 75.6
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 4.2e-77 291.6 175 74.3
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 5.5e-77 291.2 175 73.7
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 5.5e-77 291.2 177 79.1
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 9.3e-77 290.4 187 74.9
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 1.6e-76 289.7 174 75.9
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.6e-76 289.7 175 74.9
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 1.6e-76 289.7 175 74.9
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 2.7e-76 288.9 175 74.3
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 2.7e-76 288.9 175 76.0
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 4.6e-76 288.1 175 76.0
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 7.9e-76 287.3 175 76.6
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 1.3e-75 286.6 175 73.7
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 1.3e-75 286.6 176 74.4
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 5.1e-75 284.6 176 73.9
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 5.1e-75 284.6 174 74.7
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 2.5e-74 282.3 175 76.0
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 2.5e-74 282.3 186 72.6
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 2.8e-73 278.9 158 78.5
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 2.8e-73 278.9 158 78.5
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 3.7e-73 278.5 176 76.1
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 6.3e-73 277.7 203 67.5
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 8.2e-73 277.3 175 74.9
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 8.2e-73 277.3 158 77.8
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 8.2e-73 277.3 158 77.8
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 5.3e-72 274.6 175 71.4
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 3.4e-71 271.9 177 71.8
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 3.9e-67 258.5 253 55.7
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 2.5e-66 255.8 177 71.2
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 5.7e-66 254.6 175 71.4
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 3.7e-65 251.9 174 69.0
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 5.9e-63 244.6 134 81.3
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 2.1e-60 236.1 183 59.6
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 2.2e-57 226.1 180 61.1
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 4.8e-57 224.9 167 65.3
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 3.1e-56 222.2 149 65.8
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 2.0e-55 219.5 164 60.4
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 1.7e-54 216.5 117 80.3
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 3.8e-54 215.3 149 64.4
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 4.2e-53 211.8 149 64.4
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 2.7e-52 209.1 149 61.7
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 5.2e-51 204.9 134 69.4
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 2.0e-50 203.0 218 54.1
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 3.3e-50 202.2 112 77.7
PGSC0003DMG400006881 Solanum tuberosum HOM05D006647 ORTHO05D008232 4.1e-48 195.3 113 80.5
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 2.5e-45 186.0 161 59.0
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 6.1e-44 181.4 174 56.9
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 1.5e-42 176.8 82 97.6
Cpa.g.sc234.12 Carica papaya HOM05D006647 ORTHO05D008232 2.0e-42 176.4 110 77.3
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 1.7e-38 163.3 151 52.3
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 2.2e-38 162.9 161 52.2
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 3.2e-37 159.1 111 69.4
BcaB01g01017 Brassica carinata HOM05D006647 ORTHO05D008232 7.2e-37 157.9 107 69.2
BcaB04g18808 Brassica carinata HOM05D006647 ORTHO05D008232 7.2e-37 157.9 107 69.2
Aa31LG10G17440 Aethionema arabicum HOM05D006647 ORTHO05D008232 1.6e-36 156.8 106 71.7
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 2.1e-36 156.4 82 82.9
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.0e-35 154.1 82 81.7
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.4e-35 153.7 82 81.7
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 5.2e-35 151.8 81 82.7
FAN01G1906 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.2e-34 150.6 93 78.5
Ah.10g029810 Amaranthus hybridus HOM05D006647 ORTHO05D008232 7.5e-34 147.9 93 72.0
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 2.4e-32 142.9 81 77.8
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 8.9e-19 97.8 45 93.3
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 2.0e-18 96.7 50 82.0
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 9.8e-18 94.4 160 37.5
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 3.7e-17 92.4 46 82.6


User provided reference genes

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