Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g01360 Coffea canephora HOM05D007331 ORTHO05D009273 1.2e-92 343.2 173 100.0
Dinv35349 Davidia involucrata HOM05D007331 ORTHO05D009273 1.7e-59 233.0 154 79.2
Nitab4.5_0005491g0010 Nicotiana tabacum HOM05D007331 ORTHO05D009273 1.7e-59 233.0 147 78.2
Solyc03g082970.4 Solanum lycopersicum HOM05D007331 ORTHO05D009273 2.9e-59 232.3 157 75.8
PGSC0003DMG400018546 Solanum tuberosum HOM05D007331 ORTHO05D009273 2.9e-59 232.3 157 75.2
Sopen03g022780 Solanum pennellii HOM05D007331 ORTHO05D009273 5.5e-58 228.0 161 73.9
CAN.G481.32 Capsicum annuum HOM05D007331 ORTHO05D009273 1.6e-57 226.5 161 73.3
Migut.F00197 Erythranthe guttata HOM05D007331 ORTHO05D009273 2.4e-53 212.6 151 72.2
MSTRG.8644 Avicennia marina HOM05D007331 ORTHO05D009273 4.5e-52 208.4 175 65.7
COL.COLO4_16795 Corchorus olitorius HOM05D007331 ORTHO05D009273 4.5e-52 208.4 172 65.7
Gohir.A12G248800 Gossypium hirsutum HOM05D007331 ORTHO05D009273 3.8e-51 205.3 173 66.5
PSO170G4979 Papaver somniferum HOM05D007331 ORTHO05D009273 1.4e-50 203.4 153 69.9
Cfa016463 Carpinus fangiana HOM05D007331 ORTHO05D009273 1.9e-50 203.0 152 71.7
PSO063G7177 Papaver somniferum HOM05D007331 ORTHO05D009273 2.5e-50 202.6 171 64.9
GSVIVG01010322001 Vitis vinifera HOM05D007331 ORTHO05D009273 7.1e-50 201.1 136 75.0
Gorai.008G267700 Gossypium raimondii HOM05D007331 ORTHO05D009273 2.7e-49 199.1 129 79.8
Glyma.04G234000 Glycine max HOM05D007331 ORTHO05D009273 6.1e-49 198.0 152 66.4
Eucgr.K00396 Eucalyptus grandis HOM05D007331 ORTHO05D009273 1.0e-48 197.2 164 65.9
Peaxi162Scf00740g00023 Petunia axillaris HOM05D007331 ORTHO05D009273 1.0e-48 197.2 109 86.2
Potri.015G010700 Populus trichocarpa HOM05D007331 ORTHO05D009273 1.3e-48 196.8 134 76.9
PGR142G4299 Punica granatum HOM05D007331 ORTHO05D009273 1.3e-48 196.8 128 76.6
Sabra15G0008800 Salix brachista HOM05D007331 ORTHO05D009273 2.3e-48 196.1 175 64.6
CiPaw.05G198500 Carya illinoinensis HOM05D007331 ORTHO05D009273 3.9e-48 195.3 172 65.1
Phvul.009G050900 Phaseolus vulgaris HOM05D007331 ORTHO05D009273 3.9e-48 195.3 152 67.8
Lalb_Chr08g0240101 Lupinus albus HOM05D007331 ORTHO05D009273 5.1e-48 194.9 161 64.0
Glyma.06G130800 Glycine max HOM05D007331 ORTHO05D009273 1.5e-47 193.4 152 66.4
Nitab4.5_0000548g0030 Nicotiana tabacum HOM05D007331 ORTHO05D008325 3.3e-47 192.2 124 78.2
DCAR_014548 Daucus carota HOM05D007331 ORTHO05D009273 5.7e-47 191.4 179 61.5
AUR62006072 Chenopodium quinoa HOM05D007331 ORTHO05D009273 1.3e-46 190.3 138 71.0
Atru.chr12.2246 Acer truncatum HOM05D007331 ORTHO05D009273 2.2e-46 189.5 131 74.8
CANSAT21G1988 Cannabis sativa HOM05D007331 ORTHO05D009273 2.2e-46 189.5 137 72.3
Prupe.2G313600 Prunus persica HOM05D007331 ORTHO05D009273 2.2e-46 189.5 132 74.2
MD01G1223100 Malus domestica HOM05D007331 ORTHO05D009273 3.7e-46 188.7 172 62.2
Aqoxy5G04308 Aquilegia oxysepala HOM05D007331 ORTHO05D009273 6.3e-46 188.0 140 68.6
Haze_00231 Corylus avellana HOM05D007331 ORTHO05D009273 6.3e-46 188.0 181 60.2
RcHm_v2.0_Chr1g0381631 Rosa chinensis HOM05D007331 ORTHO05D009273 8.2e-46 187.6 148 66.9
Duzib068G0233 Durio zibethinus HOM05D007331 ORTHO05D009273 1.4e-45 186.8 131 73.3
Manes.05G191300 Manihot esculenta HOM05D007331 ORTHO05D009273 1.4e-45 186.8 136 72.1
FvH4_7g32020 Fragaria vesca HOM05D007331 ORTHO05D009273 2.4e-45 186.0 148 66.2
FAN01G2673 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.1e-45 185.7 148 65.5
SGA_v2.0_scaffold192G40527 Striga asiatica HOM05D007331 ORTHO05D009273 5.3e-45 184.9 135 69.6
ClCG05G009050 Citrullus lanatus HOM05D007331 ORTHO05D009273 6.9e-45 184.5 169 58.6
QL09p007955 Quercus lobata HOM05D007331 ORTHO05D009273 6.9e-45 184.5 171 60.2
ATR0730G104 Amborella trichopoda HOM05D007331 ORTHO05D009273 1.2e-44 183.7 157 61.1
Sed0023714 Sechium edule HOM05D007331 ORTHO05D009273 1.2e-44 183.7 152 65.1
CsaV3_3G019730 Cucumis sativus L. HOM05D007331 ORTHO05D009273 1.5e-44 183.3 168 59.5
CSS0016118 Camellia sinensis var. sinensis HOM05D007331 ORTHO05D009273 2.0e-44 183.0 109 83.5
Lj1g0000536 Lotus japonicus HOM05D007331 ORTHO05D009273 2.6e-44 182.6 151 62.9
MELO3C019371.2 Cucumis melo HOM05D000442 ORTHO05D007032 4.5e-44 181.8 151 62.9
Ciclev10022582m.g Citrus clementina HOM05D007331 ORTHO05D009273 1.3e-43 180.3 173 61.8
THA.LOC104798905 Tarenaya hassleriana HOM05D007331 ORTHO05D009273 1.3e-43 180.3 118 75.4
CDE04G0075 Ceratophyllum demersum HOM05D007331 ORTHO05D009273 1.7e-43 179.9 141 63.8
Psat5g075920 Pisum sativum HOM05D007331 ORTHO05D009273 2.9e-43 179.1 119 74.8
Ca_16722_v3 Cicer arietinum L. HOM05D007331 ORTHO05D009273 3.8e-43 178.7 171 59.1
Cpa.g.sc3.102 Carica papaya HOM05D007331 ORTHO05D009273 5.0e-43 178.3 109 80.7
Medtr3g491820 Medicago truncatula HOM05D007331 ORTHO05D009273 5.0e-43 178.3 136 66.9
Sp2g23030 Schrenkiella parvula HOM05D007331 ORTHO05D009273 8.5e-43 177.6 117 74.4
AL6G35810 Arabidopsis lyrata HOM05D007331 ORTHO05D009273 1.4e-42 176.8 167 59.9
Thecc.03G201300 Theobroma cacao HOM05D007331 ORTHO05D009273 1.4e-42 176.8 109 80.7
BcaNung01223 Brassica carinata HOM05D007331 ORTHO05D009273 1.9e-42 176.4 117 74.4
A06p35140 Brassica napus HOM05D007331 ORTHO05D009273 2.5e-42 176.0 117 74.4
C07p43430 Brassica napus HOM05D007331 ORTHO05D009273 2.5e-42 176.0 117 74.4
BolC7t44869H Brassica oleracea HOM05D007331 ORTHO05D009273 2.5e-42 176.0 117 74.4
BraA06t26434Z Brassica rapa HOM05D007331 ORTHO05D009273 2.5e-42 176.0 117 74.4
Thhalv10005048m.g Eutrema salsugineum HOM05D007331 ORTHO05D009273 3.2e-42 175.6 133 66.2
Nn5g27567 Nelumbo nucifera HOM05D007331 ORTHO05D009273 7.2e-42 174.5 108 79.6
TPR.G33621 Trifolium pratense HOM05D007331 ORTHO05D009273 9.4e-42 174.1 151 60.9
Hund11645 Selenicereus undatus HOM05D007331 ORTHO05D009273 1.2e-41 173.7 146 63.0
AT5G24314 Arabidopsis thaliana HOM05D007331 ORTHO05D009273 2.1e-41 172.9 166 58.4
Carub.0006s2210 Capsella rubella HOM05D007331 ORTHO05D009273 2.1e-41 172.9 133 67.7
CARHR189150 Cardamine hirsuta HOM05D007331 ORTHO05D009273 2.7e-41 172.6 117 72.6
AUR62035555 Chenopodium quinoa HOM05D007331 ORTHO05D009273 4.6e-41 171.8 107 78.5
HPP92_020186 Vanilla planifolia HOM05D007331 ORTHO05D009273 7.9e-41 171.0 121 67.8
arahy.Tifrunner.gnm1.ann1.E13FL8 Arachis hypogaea HOM05D007331 ORTHO05D009273 1.4e-40 170.2 159 57.2
VMungo1309G2222 Vigna mungo HOM05D007331 ORTHO05D009273 6.7e-40 167.9 108 77.8
TWI39G0006 Tripterygium wilfordii HOM05D007331 ORTHO05D009273 8.8e-40 167.5 110 77.3
Rhsim03G0210700 Rhododendron simsii HOM05D007331 ORTHO05D009273 1.1e-39 167.2 170 51.2
EL10Ac3g05257 Beta vulgaris HOM05D007331 ORTHO05D009273 2.5e-39 166.0 141 61.0
Actinidia34232 Actinidia chinensis HOM05D007331 ORTHO05D009273 9.7e-39 164.1 99 82.8
Ah.07g205440 Amaranthus hybridus HOM05D007331 ORTHO05D009273 1.3e-38 163.7 108 71.3
arahy.Tifrunner.gnm1.ann1.US9W38 Arachis hypogaea HOM05D007331 ORTHO05D009273 2.2e-38 162.9 178 52.2
Os01g0705300 Oryza sativa ssp. japonica HOM05D007331 ORTHO05D009273 3.7e-38 162.2 145 58.6
unitig_92.g28248 Utricularia gibba HOM05D007331 ORTHO05D009273 3.1e-37 159.1 111 72.1
FAN06G3260 Fragaria x ananassa HOM05D007331 ORTHO05D009273 1.2e-36 157.1 98 78.6
Aa31LG11G3570 Aethionema arabicum HOM05D007331 ORTHO05D009273 3.4e-36 155.6 103 72.8
FAN10G2274 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.4e-36 155.6 98 76.5
FAN10G3896 Fragaria x ananassa HOM05D007331 ORTHO05D009273 3.4e-36 155.6 98 76.5
Zm00001eb155420 Zea mays HOM05D007331 ORTHO05D009273 4.5e-36 155.2 117 62.4
Zm00001eb361120 Zea mays HOM05D007331 ORTHO05D009273 1.0e-35 154.1 144 54.2
COL.COLO4_06879 Corchorus olitorius HOM05D007331 ORTHO05D009273 1.4e-34 150.2 104 76.0
Oeu023663.2 Olea europaea HOM05D007331 ORTHO05D009273 4.2e-34 148.7 137 60.6
MBI06_g33738_MAGBIO Magnolia biondii HOM05D007331 ORTHO05D009273 2.1e-33 146.4 100 76.0
Lsat_1_v5_gn_2_136240 Lactuca sativa HOM05D007331 ORTHO05D009273 8.8e-32 141.0 135 57.8
Lj3P902T29 Lonicera japonica HOM05D007331 ORTHO05D009273 1.7e-30 136.7 86 74.4
HanXRQChr07g0206431 Helianthus annuus HOM05D007331 ORTHO05D009273 2.8e-30 136.0 120 61.7
vmacro06396 Vaccinium macrocarpon HOM05D007331 ORTHO05D009273 4.8e-30 135.2 96 66.7
ECA238G3436 Erigeron canadensis HOM05D007331 ORTHO05D009273 2.0e-28 129.8 167 48.5
Thecc.05G118900 Theobroma cacao HOM05D007331 ORTHO05D009273 1.6e-17 93.6 73 67.1
Actinidia08666 Actinidia chinensis HOM05D007331 ORTHO05D009273 4.0e-16 89.0 86 61.6
arahy.Tifrunner.gnm1.ann1.2NJ5KY Arachis hypogaea HOM05D007331 ORTHO05D009273 5.0e-11 72.0 68 57.4
Mapoly0073s0014 Marchantia polymorpha HOM05D007331 ORTHO05D009273 1.0e-08 64.3 121 32.2
AagrBONN_evm.TU.Sc2ySwM_368.2672 Anthoceros agrestis HOM05D007331 ORTHO05D009273 5.2e-08 62.0 157 29.9
Pp3c22_3530 Physcomitrium patens HOM05D007331 ORTHO05D009273 8.3e-06 54.7 122 36.9


User provided reference genes

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