Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 2.5e-110 402.1 205 100.0
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 5.3e-76 288.1 202 71.8
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 6.9e-76 287.7 200 70.0
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 1.5e-75 286.6 201 68.7
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 1.5e-75 286.6 203 69.5
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 2.0e-75 286.2 202 69.3
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 4.5e-75 285.0 201 69.2
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 4.5e-75 285.0 201 68.2
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 4.5e-75 285.0 203 69.0
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 4.5e-75 285.0 203 69.0
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 5.8e-75 284.6 200 70.0
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 5.8e-75 284.6 206 70.4
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 7.6e-75 284.3 201 69.2
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 9.9e-75 283.9 195 70.8
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 1.7e-74 283.1 198 70.2
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 2.9e-74 282.3 205 68.3
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 3.8e-74 282.0 191 70.2
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 4.9e-74 281.6 202 69.3
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 6.4e-74 281.2 203 70.0
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 8.4e-74 280.8 202 67.3
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 1.9e-73 279.6 203 67.0
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 2.4e-73 279.3 201 68.7
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 9.3e-73 277.3 203 67.0
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 1.2e-72 276.9 199 66.3
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 1.2e-72 276.9 198 66.2
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 3.5e-72 275.4 205 66.8
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 4.6e-72 275.0 204 66.7
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 6.0e-72 274.6 202 64.9
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 6.0e-72 274.6 193 69.9
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 7.9e-72 274.2 196 67.3
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 1.0e-71 273.9 199 67.3
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 1.0e-71 273.9 199 66.3
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 1.8e-71 273.1 189 69.8
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 1.8e-71 273.1 208 64.4
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 2.3e-71 272.7 205 65.4
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 2.3e-71 272.7 194 69.6
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 2.3e-71 272.7 198 66.2
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 3.0e-71 272.3 201 65.7
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 3.9e-71 271.9 198 67.2
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 3.9e-71 271.9 201 67.2
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 3.9e-71 271.9 201 65.7
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 3.9e-71 271.9 198 64.6
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 5.1e-71 271.6 200 66.5
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 5.1e-71 271.6 201 65.2
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 6.7e-71 271.2 196 67.3
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 1.1e-70 270.4 189 69.3
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 1.1e-70 270.4 208 64.9
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 1.1e-70 270.4 205 63.9
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 1.1e-70 270.4 190 68.4
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 1.5e-70 270.0 189 69.8
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 1.9e-70 269.6 201 64.2
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.5e-70 269.2 196 69.4
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 5.6e-70 268.1 190 68.9
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 5.6e-70 268.1 201 65.7
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 1.6e-69 266.5 189 68.8
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 2.1e-69 266.2 203 64.5
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 2.8e-69 265.8 182 68.1
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 2.8e-69 265.8 201 64.2
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 3.7e-69 265.4 219 63.5
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 4.8e-69 265.0 204 64.7
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 6.2e-69 264.6 198 62.6
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 4.0e-68 261.9 194 67.0
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 5.8e-67 258.1 194 66.0
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 5.8e-67 258.1 199 62.8
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 1.1e-65 253.8 186 65.1
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 1.9e-65 253.1 199 60.8
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 1.1e-62 243.8 169 71.6
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 7.4e-62 241.1 195 61.5
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 5.3e-60 235.0 165 69.1
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 5.3e-60 235.0 203 59.6
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 1.0e-58 230.7 165 69.7
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 1.4e-57 226.9 196 59.7
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 3.2e-57 225.7 193 57.0
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.5e-54 216.9 192 55.7
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 1.6e-53 213.4 197 54.3
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 5.3e-52 208.4 191 55.0
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 2.1e-48 196.4 158 61.4
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 6.7e-47 191.4 199 51.8
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 8.8e-47 191.0 149 62.4
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 1.1e-46 190.7 148 65.5
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 1.7e-45 186.8 125 70.4
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.4e-44 183.7 136 68.4
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 2.0e-38 163.3 201 42.8
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 1.1e-36 157.5 198 44.4
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 1.2e-35 154.1 121 64.5
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 7.7e-35 151.4 105 64.8
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 1.4e-31 140.6 169 47.9
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 7.0e-28 128.3 193 40.9
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.2e-27 127.5 81 75.3
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 8.0e-24 114.8 83 71.1
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 6.8e-23 111.7 82 69.5
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 3.4e-22 109.4 82 67.1
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 5.7e-22 108.6 91 59.3
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 2.2e-13 80.1 44 79.5
CBR_g40482 Chara braunii HOM05D001161 ORTHO05D000497 3.5e-11 72.8 107 43.0


User provided reference genes

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