Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc01_g01320 Coffea canephora HOM05D004247 ORTHO05D004994 3.1e-18 94.0 44 100.0
Cc10_g01080 Coffea canephora HOM05D004247 ORTHO05D004994 7.0e-18 92.8 44 97.7
COL.COLO4_26078 Corchorus olitorius HOM05D004247 ORTHO05D004994 1.0e-16 89.0 44 90.9
Lj4C16T12 Lonicera japonica HOM05D004247 ORTHO05D004994 1.0e-16 89.0 44 90.9
FvH4_2g37890 Fragaria vesca HOM05D004247 ORTHO05D004994 1.3e-16 88.6 44 90.9
FAN15G0804 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.3e-16 88.6 44 90.9
FAN20G0823 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.3e-16 88.6 44 90.9
FAN27G2657 Fragaria x ananassa HOM05D004247 ORTHO05D004994 1.3e-16 88.6 44 90.9
Nitab4.5_0007524g0020 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.3e-16 88.6 44 90.9
QL02p013016 Quercus lobata HOM05D004247 ORTHO05D004994 1.3e-16 88.6 43 90.7
RcHm_v2.0_Chr6g0303721 Rosa chinensis HOM05D004247 ORTHO05D004994 1.3e-16 88.6 44 90.9
GSVIVG01008733001 Vitis vinifera HOM05D004247 ORTHO05D004994 1.7e-16 88.2 44 90.9
AUR62036731 Chenopodium quinoa HOM05D004247 ORTHO05D004994 2.2e-16 87.8 44 90.9
Atru.chr13.210 Acer truncatum HOM05D004247 ORTHO05D004994 2.9e-16 87.4 44 88.6
CiPaw.08G069600 Carya illinoinensis HOM05D004247 ORTHO05D004994 2.9e-16 87.4 44 88.6
Haze_22717 Corylus avellana HOM05D004247 ORTHO05D004994 2.9e-16 87.4 44 88.6
MD15G1006300 Malus domestica HOM05D004247 ORTHO05D004994 2.9e-16 87.4 44 88.6
Nitab4.5_0001936g0030 Nicotiana tabacum HOM05D004247 ORTHO05D004994 2.9e-16 87.4 44 88.6
PSO541G1800 Papaver somniferum HOM05D004247 ORTHO05D004994 2.9e-16 87.4 44 88.6
PSO675G9160 Papaver somniferum HOM05D004247 ORTHO05D004994 2.9e-16 87.4 44 88.6
Sc26g0004480 Simmondsia chinensis HOM05D004247 ORTHO05D004994 2.9e-16 87.4 44 88.6
TWI56G0334 Tripterygium wilfordii HOM05D004247 ORTHO05D004994 2.9e-16 87.4 44 88.6
MD08G1007200 Malus domestica HOM05D004247 ORTHO05D004994 3.8e-16 87.0 44 86.4
arahy.Tifrunner.gnm1.ann1.X4SEKR Arachis hypogaea HOM05D004247 ORTHO05D004994 5.0e-16 86.7 44 88.6
arahy.Tifrunner.gnm1.ann1.X5CP5W Arachis hypogaea HOM05D004247 ORTHO05D004994 5.0e-16 86.7 44 88.6
Cfa014015 Carpinus fangiana HOM05D004247 ORTHO05D004994 5.0e-16 86.7 44 88.6
CANSAT25G3567 Cannabis sativa HOM05D004247 ORTHO05D004994 6.5e-16 86.3 44 86.4
Solyc04g082010.1 Solanum lycopersicum HOM05D004247 ORTHO05D004994 8.5e-16 85.9 44 88.6
Sopen04g035660 Solanum pennellii HOM05D004247 ORTHO05D004994 8.5e-16 85.9 44 88.6
CiPaw.07G143100 Carya illinoinensis HOM05D004247 ORTHO05D004994 1.1e-15 85.5 44 86.4
AUR62013862 Chenopodium quinoa HOM05D004247 ORTHO05D004994 1.9e-15 84.7 44 88.6
Hma1.2p1_0023F.1_g015810 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 1.9e-15 84.7 44 86.4
Prupe.1G358900 Prunus persica HOM05D004247 ORTHO05D004994 1.9e-15 84.7 44 81.8
PGSC0003DMG400041620 Solanum tuberosum HOM05D004247 ORTHO05D004994 1.9e-15 84.7 44 86.4
CSS0046333 Camellia sinensis var. sinensis HOM05D004247 ORTHO05D004994 3.2e-15 84.0 44 84.1
Duzib116G0390 Durio zibethinus HOM05D004247 ORTHO05D004994 3.2e-15 84.0 44 84.1
TAR381G1019 Trochodendron aralioides HOM05D004247 ORTHO05D004994 3.2e-15 84.0 44 86.4
ClCG05G015390 Citrullus lanatus HOM05D004247 ORTHO05D004994 4.2e-15 83.6 44 84.1
Ciclev10002698m.g Citrus clementina HOM05D004247 ORTHO05D004994 4.2e-15 83.6 44 84.1
Lsat_1_v5_gn_8_28601 Lactuca sativa HOM05D004247 ORTHO05D004994 4.2e-15 83.6 44 79.5
Ah.04g150590 Amaranthus hybridus HOM05D004247 ORTHO05D004994 5.5e-15 83.2 44 84.1
Lsat_1_v5_gn_0_680 Lactuca sativa HOM05D004247 ORTHO05D004994 5.5e-15 83.2 44 84.1
Lalb_Chr01g0008481 Lupinus albus HOM05D004247 ORTHO05D004994 5.5e-15 83.2 44 84.1
Lalb_Chr19g0131621 Lupinus albus HOM05D004247 ORTHO05D004994 5.5e-15 83.2 44 84.1
MBI08_g05719_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 5.5e-15 83.2 44 84.1
Peaxi162Scf00174g00103 Petunia axillaris HOM05D004247 ORTHO05D004994 5.5e-15 83.2 44 84.1
Sabra02G0012900 Salix brachista HOM05D004247 ORTHO05D004994 5.5e-15 83.2 44 86.4
Thecc.08G052400 Theobroma cacao HOM05D004247 ORTHO05D004994 5.5e-15 83.2 44 81.8
Glyma.04G020300 Glycine max HOM05D004247 ORTHO05D004994 7.2e-15 82.8 44 84.1
ATR0661G060 Amborella trichopoda HOM05D004247 ORTHO05D004994 9.4e-15 82.4 44 84.1
Glyma.06G020400 Glycine max HOM05D004247 ORTHO05D004994 9.4e-15 82.4 44 86.4
Lalb_Chr03g0033581 Lupinus albus HOM05D004247 ORTHO05D004994 9.4e-15 82.4 44 81.8
Rhsim06G0011800 Rhododendron simsii HOM05D004247 ORTHO05D004994 9.4e-15 82.4 44 81.8
Nitab4.5_0003030g0010 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.2e-14 82.0 44 81.8
PGR031G2466 Punica granatum HOM05D004247 ORTHO05D004994 1.2e-14 82.0 44 84.1
THA.LOC104809663 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.2e-14 82.0 44 81.8
THA.LOC104813771 Tarenaya hassleriana HOM05D004247 ORTHO05D004994 1.2e-14 82.0 44 81.8
TAR625G1162 Trochodendron aralioides HOM05D004247 ORTHO05D004994 1.2e-14 82.0 44 81.8
Lj4P802T100 Lonicera japonica HOM05D004247 ORTHO05D004994 1.6e-14 81.6 44 84.1
Lj1g0015317 Lotus japonicus HOM05D004247 ORTHO05D004994 1.6e-14 81.6 44 84.1
Sed0002819 Sechium edule HOM05D004247 ORTHO05D004994 1.6e-14 81.6 44 84.1
MELO3C003725.2 Cucumis melo HOM05D004247 ORTHO05D004994 2.1e-14 81.3 44 81.8
CsaV3_3G046150 Cucumis sativus L. HOM05D004247 ORTHO05D004994 2.1e-14 81.3 44 81.8
Hma1.2p1_2322F.1_g319850 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.1e-14 81.3 44 81.8
Hma1.2p1_3012F.1_g331630 Hydrangea macrophylla HOM05D004247 ORTHO05D004994 2.1e-14 81.3 44 81.8
MBI05_g34744_MAGBIO Magnolia biondii HOM05D004247 ORTHO05D004994 2.1e-14 81.3 44 84.1
Rhsim07G0251400 Rhododendron simsii HOM05D004247 ORTHO05D004994 2.1e-14 81.3 44 81.8
VMungo1309G1934 Vigna mungo HOM05D004247 ORTHO05D004994 2.1e-14 81.3 44 81.8
BcaNung03373 Brassica carinata HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 79.5
A07p15730 Brassica napus HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 79.5
A07p15830 Brassica napus HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 79.5
C07p23120 Brassica napus HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 79.5
BolC7t42849H Brassica oleracea HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 79.5
BraA07t29309Z Brassica rapa HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 79.5
CAN.G311.79 Capsicum annuum HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 81.8
ECA232G0296 Erigeron canadensis HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 81.8
Thhalv10008749m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 79.5
Psat5g011080 Pisum sativum HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 84.1
Potri.002G016000 Populus trichocarpa HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 84.1
Potri.005G246100 Populus trichocarpa HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 84.1
Sp1g18060 Schrenkiella parvula HOM05D004247 ORTHO05D004994 2.7e-14 80.9 44 79.5
HPP92_015000 Vanilla planifolia HOM05D004247 ORTHO05D004994 2.7e-14 80.9 41 85.4
CARHR020810 Cardamine hirsuta HOM05D004247 ORTHO05D004994 3.6e-14 80.5 44 81.8
Nitab4.5_0001476g0060 Nicotiana tabacum HOM05D004247 ORTHO05D004994 4.7e-14 80.1 44 77.3
Gohir.A05G182400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 6.1e-14 79.7 44 81.8
Gohir.D05G185400 Gossypium hirsutum HOM05D004247 ORTHO05D004994 6.1e-14 79.7 44 81.8
Gorai.009G190800 Gossypium raimondii HOM05D004247 ORTHO05D004994 6.1e-14 79.7 44 81.8
Phvul.009G020300 Phaseolus vulgaris HOM05D004247 ORTHO05D004994 6.1e-14 79.7 44 81.8
Actinidia37957 Actinidia chinensis HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
AL1G33170 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
BcaB03g12872 Brassica carinata HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
BcaB07g32038 Brassica carinata HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
BcaC05g25945 Brassica carinata HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
BcaC07g39030 Brassica carinata HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
A06p16430 Brassica napus HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
A08p29430 Brassica napus HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
C05p18970 Brassica napus HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
C08p20070 Brassica napus HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
BolC5t30597H Brassica oleracea HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
BraA06t24747Z Brassica rapa HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
BraA08t34878Z Brassica rapa HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
Migut.N03188 Erythranthe guttata HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
Nitab4.5_0006806g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 8.0e-14 79.3 44 79.5
Cpa.g.sc26.256 Carica papaya HOM05D004247 ORTHO05D004994 1.0e-13 79.0 44 81.8
Medtr3g114850 Medicago truncatula HOM05D004247 ORTHO05D004994 1.0e-13 79.0 44 81.8
SGA_v2.0_scaffold19G08591 Striga asiatica HOM05D004247 ORTHO05D004994 1.0e-13 79.0 41 85.4
TPR.G38114 Trifolium pratense HOM05D004247 ORTHO05D004994 1.0e-13 79.0 44 81.8
TPR.G8442 Trifolium pratense HOM05D004247 ORTHO05D004994 1.0e-13 79.0 44 81.8
Ca_15453_v3 Cicer arietinum L. HOM05D004247 ORTHO05D004994 1.4e-13 78.6 44 79.5
HanXRQChr05g0146621 Helianthus annuus HOM05D004247 ORTHO05D004994 1.4e-13 78.6 44 79.5
SalBow6G1848 Salvia bowleyana HOM05D004247 ORTHO05D004994 1.4e-13 78.6 44 81.8
Sed0013890 Sechium edule HOM05D004247 ORTHO05D004994 1.4e-13 78.6 44 79.5
AT1G20340 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 2.3e-13 77.8 44 77.3
Carub.0001s1985 Capsella rubella HOM05D004247 ORTHO05D004994 3.0e-13 77.4 44 79.5
Sabra05G0190200 Salix brachista HOM05D004247 ORTHO05D004994 3.0e-13 77.4 44 77.3
Oeu027609.1 Olea europaea HOM05D004247 ORTHO05D004994 4.0e-13 77.0 44 77.3
Oeu051143.1 Olea europaea HOM05D004247 ORTHO05D004994 4.0e-13 77.0 44 77.3
Migut.C00904 Erythranthe guttata HOM05D004247 ORTHO05D004994 5.2e-13 76.6 44 77.3
Aqoxy6G01937 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 8.8e-13 75.9 44 77.3
Zm00001eb268360 Zea mays HOM05D004247 ORTHO05D004994 8.8e-13 75.9 44 75.0
Zm00001eb379570 Zea mays HOM05D004247 ORTHO05D004994 8.8e-13 75.9 44 75.0
Aqoxy6G01936 Aquilegia oxysepala HOM05D004247 ORTHO05D004994 1.2e-12 75.5 44 72.7
SEGI_02730 Sequoiadendron giganteum HOM05D004247 ORTHO05D004994 1.2e-12 75.5 44 77.3
Os06g0101600 Oryza sativa ssp. japonica HOM05D004247 ORTHO05D004994 1.5e-12 75.1 44 77.3
BolC8t49642H Brassica oleracea HOM05D004247 ORTHO05D004994 2.0e-12 74.7 41 78.0
Dinv31897 Davidia involucrata HOM05D004247 ORTHO05D004994 2.0e-12 74.7 36 88.9
Thhalv10019237m.g Eutrema salsugineum HOM05D004247 ORTHO05D004994 3.4e-12 73.9 44 72.7
Oeu021483.1 Olea europaea HOM05D004247 ORTHO05D004994 4.4e-12 73.6 44 75.0
Aa31LG4G6220 Aethionema arabicum HOM05D004247 ORTHO05D004994 5.7e-12 73.2 44 70.5
CDE04G1887 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 9.8e-12 72.4 44 75.0
CARHR069640 Cardamine hirsuta HOM05D004247 ORTHO05D004994 1.7e-11 71.6 44 72.7
Aa31LG7G4700 Aethionema arabicum HOM05D004247 ORTHO05D004994 2.2e-11 71.2 44 75.0
BcaC08g47292 Brassica carinata HOM05D004247 ORTHO05D004994 2.8e-11 70.9 44 70.5
A07p41660 Brassica napus HOM05D004247 ORTHO05D004994 2.8e-11 70.9 44 70.5
C06p50040 Brassica napus HOM05D004247 ORTHO05D004994 2.8e-11 70.9 44 70.5
BolC6t40043H Brassica oleracea HOM05D004247 ORTHO05D004994 2.8e-11 70.9 44 70.5
BraA07t31695Z Brassica rapa HOM05D004247 ORTHO05D004994 2.8e-11 70.9 44 70.5
Manes.05G142000 Manihot esculenta HOM05D004247 ORTHO05D004994 2.8e-11 70.9 44 70.5
Dinv39560 Davidia involucrata HOM05D004247 ORTHO05D004994 3.7e-11 70.5 36 80.6
Sp5g31220 Schrenkiella parvula HOM05D004247 ORTHO05D004994 3.7e-11 70.5 44 68.2
DCAR_013894 Daucus carota HOM05D004247 ORTHO05D004994 4.8e-11 70.1 44 70.5
unitig_899.g15551 Utricularia gibba HOM05D004247 ORTHO05D004994 4.8e-11 70.1 44 70.5
BcaC08g47103 Brassica carinata HOM05D004247 ORTHO05D004994 6.3e-11 69.7 44 70.5
ECA233G0125 Erigeron canadensis HOM05D004247 ORTHO05D004994 8.3e-11 69.3 36 77.8
Nitab4.5_0002353g0080 Nicotiana tabacum HOM05D004247 ORTHO05D004994 1.1e-10 68.9 44 70.5
AL2G36140 Arabidopsis lyrata HOM05D004247 ORTHO05D004994 1.4e-10 68.6 44 65.9
AT1G76100 Arabidopsis thaliana HOM05D004247 ORTHO05D004994 3.1e-10 67.4 44 68.2
Cre03.g182551 Chlamydomonas reinhardtii HOM05D004247 ORTHO05D004994 3.1e-10 67.4 44 65.9
ECA232G3771 Erigeron canadensis HOM05D004247 ORTHO05D004994 3.1e-10 67.4 44 65.9
SMO351G0102 Selaginella moellendorffii HOM05D004247 ORTHO05D004994 7.0e-10 66.2 44 63.6
CDE02G3101 Ceratophyllum demersum HOM05D004247 ORTHO05D004994 1.6e-09 65.1 40 67.5
PRCOL_00002380 Prasinoderma coloniale HOM05D004247 ORTHO05D004994 3.5e-09 63.9 44 63.6
AagrBONN_evm.TU.Sc2ySwM_228.703 Anthoceros agrestis HOM05D004247 ORTHO05D004994 5.9e-09 63.2 44 59.1
EL10Ac1g02063 Beta vulgaris HOM05D004247 ORTHO05D004994 7.7e-09 62.8 36 75.0
Pp3c19_21160 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.2e-08 61.2 44 59.1
Pp3c18_13090 Physcomitrium patens HOM05D004247 ORTHO05D004994 1.1e-07 58.9 44 54.5
CBR_g18572 Chara braunii HOM05D004247 ORTHO05D004994 2.5e-07 57.8 44 56.8
Pp3c21_4230 Physcomitrium patens HOM05D004247 ORTHO05D004994 2.5e-07 57.8 44 54.5
MCO15G475 Micromonas commoda HOM05D004247 ORTHO05D004994 6.1e-06 53.1 44 52.3


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