Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g35230 Coffea canephora HOM05D004952 ORTHO05D006131 3.6e-197 691.4 356 100.0
Cc00_g35300 Coffea canephora HOM05D004952 ORTHO05D006131 3.5e-184 648.3 339 98.5
Cc00_g16150 Coffea canephora HOM05D004952 ORTHO05D006131 4.0e-172 608.2 317 98.7
MSTRG.25114 Avicennia marina HOM05D004952 ORTHO05D006131 4.2e-129 465.3 315 76.2
Dinv39342 Davidia involucrata HOM05D004952 ORTHO05D006131 2.1e-128 463.0 315 75.2
Lj4C49T7 Lonicera japonica HOM05D004952 ORTHO05D006131 1.4e-124 450.3 316 73.7
Hma1.2p1_0260F.1_g104650 Hydrangea macrophylla HOM05D004952 ORTHO05D006131 3.4e-123 445.7 315 72.7
Hma1.2p1_0260F.1_g104660 Hydrangea macrophylla HOM05D004952 ORTHO05D006131 3.4e-123 445.7 315 72.7
RcHm_v2.0_Chr6g0299841 Rosa chinensis HOM05D004952 ORTHO05D006131 1.3e-122 443.7 315 71.1
FAN15G3424 Fragaria x ananassa HOM05D004952 ORTHO05D006131 2.9e-122 442.6 315 71.7
TAR381G0370 Trochodendron aralioides HOM05D004952 ORTHO05D006131 6.5e-122 441.4 317 71.0
Cfa003370 Carpinus fangiana HOM05D004952 ORTHO05D006131 8.4e-122 441.0 315 71.7
Prupe.1G389900 Prunus persica HOM05D004952 ORTHO05D006131 1.4e-121 440.3 347 67.1
Atru.chr13.612 Acer truncatum HOM05D004952 ORTHO05D006131 2.5e-121 439.5 315 72.1
MD15G1036000 Malus domestica HOM05D004952 ORTHO05D006131 2.5e-121 439.5 315 71.7
Haze_17576 Corylus avellana HOM05D004952 ORTHO05D006131 7.2e-121 438.0 337 68.2
FAN27G3039 Fragaria x ananassa HOM05D004952 ORTHO05D006131 9.3e-121 437.6 315 71.1
PGSC0003DMG400008031 Solanum tuberosum HOM05D004952 ORTHO05D006131 1.2e-120 437.2 315 72.1
GSVIVG01009573001 Vitis vinifera HOM05D004952 ORTHO05D006131 1.2e-120 437.2 297 75.4
Nitab4.5_0000068g0320 Nicotiana tabacum HOM05D004952 ORTHO05D006131 2.7e-120 436.0 315 70.8
Ciclev10000139m.g Citrus clementina HOM05D004952 ORTHO05D006131 6.1e-120 434.9 317 70.7
FvH4_2g40750 Fragaria vesca HOM05D004952 ORTHO05D006131 3.9e-119 432.2 315 70.8
Cpa.g.sc64.8 Carica papaya HOM05D004952 ORTHO05D006131 5.1e-119 431.8 318 69.8
Solyc04g079390.3 Solanum lycopersicum HOM05D004952 ORTHO05D006131 6.7e-119 431.4 315 71.4
Sopen04g033000 Solanum pennellii HOM05D004952 ORTHO05D006131 1.5e-118 430.3 315 71.4
Oeu055752.1 Olea europaea HOM05D004952 ORTHO05D006131 4.3e-118 428.7 296 75.0
CAN.G371.63 Capsicum annuum HOM05D004952 ORTHO05D006131 5.7e-118 428.3 315 70.5
CiPaw.16G049700 Carya illinoinensis HOM05D004952 ORTHO05D006131 9.7e-118 427.6 315 68.9
Gohir.A10G194100 Gossypium hirsutum HOM05D004952 ORTHO05D006131 1.3e-117 427.2 313 68.7
Sabra16G0008200 Salix brachista HOM05D004952 ORTHO05D006131 1.3e-117 427.2 316 69.9
vmacro02786 Vaccinium macrocarpon HOM05D004952 ORTHO05D006131 1.6e-117 426.8 315 69.2
DCAR_008784 Daucus carota HOM05D004952 ORTHO05D006131 8.2e-117 424.5 317 69.7
Thecc.10G126500 Theobroma cacao HOM05D004952 ORTHO05D006131 1.4e-116 423.7 339 65.5
TWI36G1022 Tripterygium wilfordii HOM05D004952 ORTHO05D006131 3.1e-116 422.5 315 69.5
Peaxi162Scf01092g00128 Petunia axillaris HOM05D004952 ORTHO05D006131 4.1e-116 422.2 317 70.0
Lalb_Chr08g0245691 Lupinus albus HOM05D004952 ORTHO05D006131 6.9e-116 421.4 315 66.7
Sed0020372 Sechium edule HOM05D004952 ORTHO05D006131 9.0e-116 421.0 317 67.2
COL.COLO4_06475 Corchorus olitorius HOM05D004952 ORTHO05D006131 1.5e-115 420.2 316 68.0
Duzib114G0971 Durio zibethinus HOM05D004952 ORTHO05D006131 2.0e-115 419.9 315 67.9
Migut.C00614 Erythranthe guttata HOM05D004952 ORTHO05D006131 4.5e-115 418.7 315 68.9
ClCG05G019550 Citrullus lanatus HOM05D004952 ORTHO05D006131 5.9e-115 418.3 317 67.2
Gorai.011G225900 Gossypium raimondii HOM05D004952 ORTHO05D006131 5.9e-115 418.3 315 67.3
Lj1g0021809 Lotus japonicus HOM05D004952 ORTHO05D006131 7.7e-115 417.9 317 67.2
Gohir.D10G201200 Gossypium hirsutum HOM05D004952 ORTHO05D006131 1.3e-114 417.2 315 67.3
QL02p006188 Quercus lobata HOM05D004952 ORTHO05D006131 1.3e-114 417.2 315 69.2
CsaV3_4G034010 Cucumis sativus L. HOM05D004952 ORTHO05D006131 2.9e-114 416.0 317 66.9
Eucgr.F02379 Eucalyptus grandis HOM05D004952 ORTHO05D006131 6.5e-114 414.8 313 66.1
Rhsim13G0049200 Rhododendron simsii HOM05D004952 ORTHO05D006131 8.5e-114 414.5 334 66.5
Glyma.06G036500 Glycine max HOM05D004952 ORTHO05D006131 1.4e-113 413.7 315 67.0
SalBow7G3268 Salvia bowleyana HOM05D004952 ORTHO05D006131 1.9e-113 413.3 323 69.0
PGR031G2121 Punica granatum HOM05D004952 ORTHO05D006131 7.2e-113 411.4 318 66.0
Aqoxy6G00884 Aquilegia oxysepala HOM05D004952 ORTHO05D006131 9.4e-113 411.0 315 65.7
Thhalv10018067m.g Eutrema salsugineum HOM05D004952 ORTHO05D006131 2.7e-112 409.5 321 66.7
Ca_15974_v3 Cicer arietinum L. HOM05D004952 ORTHO05D006131 4.6e-112 408.7 315 66.3
Nn6g34572 Nelumbo nucifera HOM05D004952 ORTHO05D006131 1.4e-111 407.1 317 67.2
Manes.02G076400 Manihot esculenta HOM05D004952 ORTHO05D006131 1.8e-111 406.8 315 66.0
Sp5g35550 Schrenkiella parvula HOM05D004952 ORTHO05D006131 1.8e-111 406.8 321 66.7
Phvul.009G062500 Phaseolus vulgaris HOM05D004952 ORTHO05D006131 2.3e-111 406.4 317 65.9
THA.LOC104813523 Tarenaya hassleriana HOM05D004952 ORTHO05D006131 3.0e-111 406.0 322 68.0
arahy.Tifrunner.gnm1.ann1.SSY1YH Arachis hypogaea HOM05D004952 ORTHO05D006131 3.9e-111 405.6 315 66.0
Actinidia03540 Actinidia chinensis HOM05D004952 ORTHO05D006131 6.7e-111 404.8 269 75.5
ECA240G1628 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.7e-111 404.8 316 65.5
Nitab4.5_0012613g0030 Nicotiana tabacum HOM05D004952 ORTHO05D006131 6.7e-111 404.8 315 66.7
arahy.Tifrunner.gnm1.ann1.LUQS0S Arachis hypogaea HOM05D004952 ORTHO05D006131 8.8e-111 404.4 315 65.7
AT1G80260 Arabidopsis thaliana HOM05D004952 ORTHO05D006131 3.3e-110 402.5 316 66.1
HanXRQChr02g0059171 Helianthus annuus HOM05D004952 ORTHO05D006131 3.3e-110 402.5 317 67.8
Hund10174 Selenicereus undatus HOM05D004952 ORTHO05D006131 5.7e-110 401.7 317 65.3
Carub.0001s2004 Capsella rubella HOM05D004952 ORTHO05D006131 7.4e-110 401.4 321 65.7
CANSAT25G3148 Cannabis sativa HOM05D004952 ORTHO05D006131 9.7e-110 401.0 315 65.7
A02p23690 Brassica napus HOM05D004952 ORTHO05D006131 1.3e-109 400.6 321 65.1
BraA02t07362Z Brassica rapa HOM05D004952 ORTHO05D006131 1.3e-109 400.6 321 65.1
CANSAT35G0575 Cannabis sativa HOM05D004952 ORTHO05D006131 1.3e-109 400.6 315 66.3
CARHR074230 Cardamine hirsuta HOM05D004952 ORTHO05D006131 2.2e-109 399.8 316 66.5
VMungo1309G1417 Vigna mungo HOM05D004952 ORTHO05D006131 2.2e-109 399.8 317 64.4
Sc18g0002370 Simmondsia chinensis HOM05D004952 ORTHO05D006131 4.8e-109 398.7 317 65.0
C02p37450 Brassica napus HOM05D004952 ORTHO05D006131 6.3e-109 398.3 321 65.7
Medtr3g101230 Medicago truncatula HOM05D004952 ORTHO05D006131 6.3e-109 398.3 315 64.8
FAN20G1371 Fragaria x ananassa HOM05D004952 ORTHO05D006131 8.2e-109 397.9 315 67.3
TPR.G26027 Trifolium pratense HOM05D004952 ORTHO05D006131 8.2e-109 397.9 315 63.8
BcaB05g25284 Brassica carinata HOM05D004952 ORTHO05D006131 1.4e-108 397.1 321 65.4
BolC2t09757H Brassica oleracea HOM05D004952 ORTHO05D006131 1.4e-108 397.1 321 65.1
EL10Ac2g03413 Beta vulgaris HOM05D004952 ORTHO05D006131 1.8e-108 396.7 344 62.2
BcaC03g15988 Brassica carinata HOM05D004952 ORTHO05D006131 3.1e-108 396.0 321 65.1
PSO063G1848 Papaver somniferum HOM05D004952 ORTHO05D006131 1.2e-107 394.0 314 65.6
Lsat_1_v5_gn_6_69040 Lactuca sativa HOM05D004952 ORTHO05D006131 1.1e-105 387.5 320 64.4
Haze_25582 Corylus avellana HOM05D004952 ORTHO05D006131 1.9e-105 386.7 279 71.0
Psat5g044920 Pisum sativum HOM05D004952 ORTHO05D006131 1.6e-104 383.6 315 63.2
PSO339G5893 Papaver somniferum HOM05D004952 ORTHO05D006131 2.7e-104 382.9 317 64.4
Aa31LG4G540 Aethionema arabicum HOM05D004952 ORTHO05D006131 6.1e-104 381.7 369 57.7
BcaB02g07284 Brassica carinata HOM05D004952 ORTHO05D006131 5.1e-103 378.6 321 62.6
AT1G20570 Arabidopsis thaliana HOM05D004952 ORTHO05D006131 3.7e-101 372.5 321 62.3
Manes.10G059950 Manihot esculenta HOM05D004952 ORTHO05D006131 5.5e-97 358.6 315 61.0
MELO3C016726.2 Cucumis melo HOM05D004952 ORTHO05D006131 2.3e-95 353.2 330 57.9
CSS0007693 Camellia sinensis var. sinensis HOM05D004952 ORTHO05D006131 8.8e-95 351.3 586 40.4
AUR62038364 Chenopodium quinoa HOM05D004952 ORTHO05D006131 1.1e-94 350.9 282 67.0
Oeu007037.1 Olea europaea HOM05D004952 ORTHO05D006131 3.3e-94 349.4 324 61.4
AUR62040965 Chenopodium quinoa HOM05D004952 ORTHO05D006131 1.3e-93 347.4 282 66.3
BcaC08g45301 Brassica carinata HOM05D004952 ORTHO05D006131 6.3e-93 345.1 306 63.4
BolC6t38070H Brassica oleracea HOM05D004952 ORTHO05D006131 6.3e-93 345.1 306 63.4
unitig_0.g724 Utricularia gibba HOM05D004952 ORTHO05D006131 4.1e-92 342.4 299 62.2
Os12g0606100 Oryza sativa ssp. japonica HOM05D004952 ORTHO05D006131 7.0e-92 341.7 297 60.6
Cc10_g03830 Coffea canephora HOM05D004952 ORTHO05D006131 3.5e-91 339.3 179 96.6
SHI13748 Sapria himalayana HOM05D004952 ORTHO05D006131 4.5e-91 339.0 317 57.4
Os02g0523300 Oryza sativa ssp. japonica HOM05D004952 ORTHO05D006131 1.0e-90 337.8 297 59.9
Zm00001eb327280 Zea mays HOM05D004952 ORTHO05D006131 2.7e-88 329.7 315 57.1
HPP92_010073 Vanilla planifolia HOM05D004952 ORTHO05D006131 4.7e-88 328.9 308 58.8
TAR625G1292 Trochodendron aralioides HOM05D004952 ORTHO05D006131 2.3e-87 326.6 315 57.1
ATR0706G013 Amborella trichopoda HOM05D004952 ORTHO05D006131 2.6e-86 323.2 302 57.9
SEGI_10220 Sequoiadendron giganteum HOM05D004952 ORTHO05D006131 1.1e-84 317.8 297 56.6
Potri.014G184801 Populus trichocarpa HOM05D004952 ORTHO05D006131 1.5e-73 280.8 216 68.1
Mapoly0015s0183 Marchantia polymorpha HOM05D004952 ORTHO05D006131 5.2e-71 272.3 305 49.8
SEGI_19344 Sequoiadendron giganteum HOM05D004952 ORTHO05D006131 1.2e-70 271.2 261 55.2
Pp3c13_8820 Physcomitrium patens HOM05D004952 ORTHO05D006131 1.1e-65 254.6 285 49.1
SGA_v2.0_scaffold156G37306 Striga asiatica HOM05D004952 ORTHO05D006131 8.9e-63 245.0 315 50.2
AagrBONN_evm.TU.Sc2ySwM_344.3827 Anthoceros agrestis HOM05D004952 ORTHO05D006131 2.9e-61 240.0 280 46.8
CDE04G1747 Ceratophyllum demersum HOM05D004952 ORTHO05D006131 1.3e-58 231.1 305 45.6
CBR_g22067 Chara braunii HOM05D004952 ORTHO05D006131 4.9e-53 212.6 330 40.9
CSS0028060 Camellia sinensis var. sinensis HOM05D004952 ORTHO05D006131 1.8e-47 194.1 128 76.6
CSS0048180 Camellia sinensis var. sinensis HOM05D004952 ORTHO05D006131 5.1e-34 149.4 164 50.6
Glyma.04G036420 Glycine max HOM05D004952 ORTHO05D006131 8.1e-24 115.5 88 60.2
SGA_v2.0_scaffold5008G54579 Striga asiatica HOM05D004952 ORTHO05D006131 1.3e-21 108.2 90 62.2
Potri.014G184701 Populus trichocarpa HOM05D004952 ORTHO05D006131 1.3e-18 98.2 59 79.7
Potri.016G000100 Populus trichocarpa HOM05D004952 ORTHO05D006131 8.7e-18 95.5 83 57.8
C06p29070 Brassica napus HOM05D002649 ORTHO05D002838 1.2e-14 85.1 90 53.3
MELO3C010311.2 Cucumis melo HOM05D004952 ORTHO05D006131 2.7e-11 73.9 55 60.0
MELO3C016650.2 Cucumis melo HOM05D004952 ORTHO05D006131 9.6e-09 65.5 51 66.7


User provided reference genes

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