Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g30670 Coffea canephora HOM05D006647 ORTHO05D008232 1.1e-49 199.5 92 100.0
Cc02_g28430 Coffea canephora HOM05D006647 ORTHO05D008232 1.0e-42 176.4 82 97.6
Dinv09377 Davidia involucrata HOM05D006647 ORTHO05D008232 8.8e-39 163.3 82 89.0
CDE06G2349 Ceratophyllum demersum HOM05D006647 ORTHO05D008232 2.6e-38 161.8 82 87.8
DCAR_006301 Daucus carota HOM05D006647 ORTHO05D008232 2.6e-38 161.8 82 89.0
Lj9A629T102 Lonicera japonica HOM05D006647 ORTHO05D008232 2.6e-38 161.8 82 89.0
TAR633G0758 Trochodendron aralioides HOM05D006647 ORTHO05D008232 3.3e-38 161.4 82 89.0
Oeu010354.1 Olea europaea HOM05D006647 ORTHO05D008232 4.4e-38 161.0 84 85.7
CiPaw.13G002900 Carya illinoinensis HOM05D006647 ORTHO05D008232 7.4e-38 160.2 82 89.0
Nn2g15502 Nelumbo nucifera HOM05D006647 ORTHO05D008232 7.4e-38 160.2 82 87.8
TWI73G0313 Tripterygium wilfordii HOM05D006647 ORTHO05D008232 7.4e-38 160.2 82 87.8
HanXRQChr01g0017301 Helianthus annuus HOM05D006647 ORTHO05D008232 9.7e-38 159.8 82 85.4
PGR031G3323 Punica granatum HOM05D006647 ORTHO05D008232 9.7e-38 159.8 84 86.9
Atru.chr11.2639 Acer truncatum HOM05D006647 ORTHO05D008232 1.3e-37 159.5 82 87.8
Phvul.005G036700 Phaseolus vulgaris HOM05D006647 ORTHO05D008232 1.3e-37 159.5 82 87.8
FAN01G1843 Fragaria x ananassa HOM05D006647 ORTHO05D008232 1.7e-37 159.1 85 83.5
Rhsim01G0130800 Rhododendron simsii HOM05D006647 ORTHO05D008232 1.7e-37 159.1 82 87.8
ATR0605G070 Amborella trichopoda HOM05D006647 ORTHO05D008232 2.2e-37 158.7 87 79.3
Cfa010738 Carpinus fangiana HOM05D006647 ORTHO05D008232 3.7e-37 157.9 82 87.8
Haze_03236 Corylus avellana HOM05D006647 ORTHO05D008232 3.7e-37 157.9 82 87.8
Actinidia20680 Actinidia chinensis HOM05D006647 ORTHO05D008232 4.8e-37 157.5 82 87.8
MSTRG.5006 Avicennia marina HOM05D006647 ORTHO05D008232 4.8e-37 157.5 87 82.8
Ciclev10032303m.g Citrus clementina HOM05D006647 ORTHO05D008232 4.8e-37 157.5 82 86.6
ECA248G3327 Erigeron canadensis HOM05D006647 ORTHO05D008232 4.8e-37 157.5 82 84.1
Eucgr.G03394 Eucalyptus grandis HOM05D006647 ORTHO05D008232 4.8e-37 157.5 82 85.4
CSS0029691 Camellia sinensis var. sinensis HOM05D006647 ORTHO05D008232 6.3e-37 157.1 82 86.6
Hma1.2p1_0929F.1_g237940 Hydrangea macrophylla HOM05D006647 ORTHO05D008232 6.3e-37 157.1 82 85.4
VMungo1080G0119 Vigna mungo HOM05D006647 ORTHO05D008232 6.3e-37 157.1 82 86.6
THA.LOC104801981 Tarenaya hassleriana HOM05D006647 ORTHO05D008232 8.2e-37 156.8 82 85.4
Lj5g0023478 Lotus japonicus HOM05D006647 ORTHO05D008232 1.4e-36 156.0 82 84.1
Manes.07G004100 Manihot esculenta HOM05D006647 ORTHO05D008232 1.4e-36 156.0 82 86.6
Prupe.2G009700 Prunus persica HOM05D006647 ORTHO05D008232 1.4e-36 156.0 87 81.6
GSVIVG01032057001 Vitis vinifera HOM05D006647 ORTHO05D008232 1.4e-36 156.0 82 85.4
Duzib138G0958 Durio zibethinus HOM05D006647 ORTHO05D008232 2.4e-36 155.2 82 84.1
FAN01G0876 Fragaria x ananassa HOM05D006647 ORTHO05D008232 2.4e-36 155.2 82 84.1
FvH4_7g00690 Fragaria vesca HOM05D006647 ORTHO05D008232 3.1e-36 154.8 82 84.1
FAN03G0714 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.1e-36 154.8 82 84.1
FAN06G3601 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.1e-36 154.8 82 84.1
FAN10G4164 Fragaria x ananassa HOM05D006647 ORTHO05D008232 3.1e-36 154.8 82 84.1
Potri.009G064500 Populus trichocarpa HOM05D006647 ORTHO05D008232 3.1e-36 154.8 82 84.1
SalBow4G2297 Salvia bowleyana HOM05D006647 ORTHO05D008232 3.1e-36 154.8 84 81.0
Glyma.08G152700 Glycine max HOM05D006647 ORTHO05D008232 4.1e-36 154.5 82 84.1
QL04p005221 Quercus lobata HOM05D006647 ORTHO05D008232 5.3e-36 154.1 82 85.4
HPP92_015763 Vanilla planifolia HOM05D006647 ORTHO05D008232 5.3e-36 154.1 82 81.7
arahy.Tifrunner.gnm1.ann1.BH4E67 Arachis hypogaea HOM05D006647 ORTHO05D008232 7.0e-36 153.7 82 84.1
arahy.Tifrunner.gnm1.ann1.K7GJAS Arachis hypogaea HOM05D006647 ORTHO05D008232 7.0e-36 153.7 82 84.1
Ca_26823_v3 Cicer arietinum L. HOM05D006647 ORTHO05D008232 7.0e-36 153.7 81 85.2
Medtr3g027870 Medicago truncatula HOM05D006647 ORTHO05D008232 7.0e-36 153.7 82 84.1
Psat5g204920 Pisum sativum HOM05D006647 ORTHO05D008232 7.0e-36 153.7 82 84.1
Sabra09G0047700 Salix brachista HOM05D006647 ORTHO05D008232 7.0e-36 153.7 82 84.1
TPR.G12287 Trifolium pratense HOM05D006647 ORTHO05D008232 7.0e-36 153.7 82 84.1
CANSAT01G0516 Cannabis sativa HOM05D006647 ORTHO05D008232 9.1e-36 153.3 82 84.1
RcHm_v2.0_Chr1g0314911 Rosa chinensis HOM05D006647 ORTHO05D008232 9.1e-36 153.3 82 84.1
PSO339G5555 Papaver somniferum HOM05D006647 ORTHO05D008232 1.2e-35 152.9 86 77.9
Gorai.004G174000 Gossypium raimondii HOM05D006647 ORTHO05D008232 1.6e-35 152.5 82 81.7
Lalb_Chr25g0283211 Lupinus albus HOM05D006647 ORTHO05D008232 1.6e-35 152.5 82 81.7
MD07G1006600 Malus domestica HOM05D006647 ORTHO05D008232 1.6e-35 152.5 82 82.9
Gohir.A08G145600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 2.0e-35 152.1 82 80.5
PSO384G2587 Papaver somniferum HOM05D006647 ORTHO05D008232 2.0e-35 152.1 86 77.9
Thhalv10006150m.g Eutrema salsugineum HOM05D006647 ORTHO05D008232 2.6e-35 151.8 82 79.3
AUR62009372 Chenopodium quinoa HOM05D006647 ORTHO05D008232 3.5e-35 151.4 82 81.7
Nitab4.5_0001542g0050 Nicotiana tabacum HOM05D006647 ORTHO05D008232 3.5e-35 151.4 82 84.1
Peaxi162Scf00428g00819 Petunia axillaris HOM05D006647 ORTHO05D008232 3.5e-35 151.4 82 82.9
Thecc.01G413900 Theobroma cacao HOM05D006647 ORTHO05D008232 3.5e-35 151.4 82 81.7
CARHR291410 Cardamine hirsuta HOM05D006647 ORTHO05D008232 5.9e-35 150.6 82 79.3
Sp1g00030 Schrenkiella parvula HOM05D006647 ORTHO05D008232 5.9e-35 150.6 82 78.0
Sp5g00020 Schrenkiella parvula HOM05D006647 ORTHO05D008232 5.9e-35 150.6 82 78.0
BcaC01g03971 Brassica carinata HOM05D006647 ORTHO05D008232 7.7e-35 150.2 82 79.3
A03p38460 Brassica napus HOM05D006647 ORTHO05D008232 7.7e-35 150.2 82 79.3
A03p38500 Brassica napus HOM05D006647 ORTHO05D008232 7.7e-35 150.2 82 79.3
BraA03t12997Z Brassica rapa HOM05D006647 ORTHO05D008232 7.7e-35 150.2 82 79.3
COL.COLO4_23898 Corchorus olitorius HOM05D006647 ORTHO05D008232 7.7e-35 150.2 82 81.7
Gohir.D08G166600 Gossypium hirsutum HOM05D006647 ORTHO05D008232 7.7e-35 150.2 82 79.3
Sed0007518 Sechium edule HOM05D006647 ORTHO05D008232 7.7e-35 150.2 81 81.5
Nitab4.5_0011905g0020 Nicotiana tabacum HOM05D006647 ORTHO05D008232 1.0e-34 149.8 82 82.9
Sc11g0009300 Simmondsia chinensis HOM05D006647 ORTHO05D008232 1.3e-34 149.4 82 82.9
Solyc01g086900.4 Solanum lycopersicum HOM05D006647 ORTHO05D008232 1.7e-34 149.1 82 82.9
Sopen01g033910 Solanum pennellii HOM05D006647 ORTHO05D008232 1.7e-34 149.1 82 82.9
C03p46630 Brassica napus HOM05D006647 ORTHO05D008232 2.2e-34 148.7 82 78.0
BolC3t16926H Brassica oleracea HOM05D006647 ORTHO05D008232 2.2e-34 148.7 82 78.0
CsaV3_7G031240 Cucumis sativus L. HOM05D006647 ORTHO05D008232 2.9e-34 148.3 81 81.5
AL5G46420 Arabidopsis lyrata HOM05D006647 ORTHO05D008232 3.8e-34 147.9 82 76.8
Carub.0005s3017 Capsella rubella HOM05D006647 ORTHO05D008232 6.5e-34 147.1 82 76.8
AT5G26880 Arabidopsis thaliana HOM05D006647 ORTHO05D008232 1.1e-33 146.4 82 76.8
EL10Ac2g04310 Beta vulgaris HOM05D006647 ORTHO05D008232 1.1e-33 146.4 84 78.6
Migut.O00562 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.5e-33 146.0 82 78.0
Zm00001eb034920 Zea mays HOM05D006647 ORTHO05D008232 3.2e-33 144.8 81 80.2
unitig_0.g1579 Utricularia gibba HOM05D006647 ORTHO05D008232 1.2e-32 142.9 110 64.5
Mapoly0078s0003 Marchantia polymorpha HOM05D006647 ORTHO05D008232 3.6e-32 141.4 82 74.4
MBI01_g36432_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 6.1e-32 140.6 84 76.2
Hund20080 Selenicereus undatus HOM05D006647 ORTHO05D008232 8.0e-32 140.2 93 73.1
Pp3c8_11960 Physcomitrium patens HOM05D006647 ORTHO05D008232 2.3e-31 138.7 82 72.0
MSTRG.5008 Avicennia marina HOM05D006647 ORTHO05D008232 2.0e-30 135.6 82 73.2
AagrBONN_evm.TU.Sc2ySwM_362.154 Anthoceros agrestis HOM05D006647 ORTHO05D008232 4.4e-30 134.4 82 70.7
CBR_g41537 Chara braunii HOM05D006647 ORTHO05D008232 1.3e-29 132.9 82 72.0
Lsat_1_v5_gn_1_109441 Lactuca sativa HOM05D006647 ORTHO05D008232 8.2e-29 130.2 64 87.5
Pp3c23_8130 Physcomitrium patens HOM05D006647 ORTHO05D008232 8.2e-29 130.2 82 68.3
Migut.N01481 Erythranthe guttata HOM05D006647 ORTHO05D008232 1.2e-27 126.3 82 70.7
SMO351G0607 Selaginella moellendorffii HOM05D006647 ORTHO05D008232 1.6e-27 125.9 77 71.4
SGA_v2.0_scaffold4G02252 Striga asiatica HOM05D006647 ORTHO05D008232 2.0e-27 125.6 64 87.5
ClCG09G004320 Citrullus lanatus HOM05D006647 ORTHO05D008232 1.7e-26 122.5 63 84.1
QL04p005246 Quercus lobata HOM05D000030 ORTHO05D008232 1.0e-23 113.2 82 68.3
MCO06G107 Micromonas commoda HOM05D006647 ORTHO05D008232 7.0e-20 100.5 88 55.7
Cpa.g.sc234.13 Carica papaya HOM05D006647 ORTHO05D008232 4.5e-19 97.8 45 95.6
vmacro21178 Vaccinium macrocarpon HOM05D006647 ORTHO05D008232 4.5e-19 97.8 47 91.5
Cre10.g417650 Chlamydomonas reinhardtii HOM05D006647 ORTHO05D008232 1.0e-18 96.7 91 50.5
MBI04_g09488_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 1.0e-18 96.7 50 84.0
MBI04_g14259_MAGBIO Magnolia biondii HOM05D006647 ORTHO05D008232 8.5e-18 93.6 82 57.3
Aa31LG10G17450 Aethionema arabicum HOM05D006647 ORTHO05D008232 2.5e-17 92.0 44 88.6
AUR62023053 Chenopodium quinoa HOM05D006647 ORTHO05D008232 7.2e-17 90.5 58 70.7
PRCOL_00005260 Prasinoderma coloniale HOM05D006647 ORTHO05D008232 2.0e-11 72.4 82 41.5
Os08g0506500 Oryza sativa ssp. japonica HOM05D006647 ORTHO05D008232 3.8e-10 68.2 63 58.7
MELO3C023534.2 Cucumis melo HOM05D006647 ORTHO05D008232 7.3e-09 63.9 41 63.4


User provided reference genes

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