Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g29680 Coffea canephora HOM05D000142 ORTHO05D003173 1.3e-80 303.1 170 100.0
Cc00_g22260 Coffea canephora HOM05D000142 ORTHO05D003173 1.3e-35 153.7 132 74.2
SGA_v2.0_scaffold28G11896 Striga asiatica HOM05D000142 ORTHO05D003173 2.5e-23 112.8 97 61.9
Oeu029731.1 Olea europaea HOM05D000142 ORTHO05D003173 3.3e-23 112.5 158 45.6
Dinv07079 Davidia involucrata HOM05D000142 ORTHO05D003173 1.6e-22 110.2 135 46.7
HanXRQChr05g0163171 Helianthus annuus HOM05D000142 ORTHO05D003173 1.6e-22 110.2 107 55.1
vmacro21285 Vaccinium macrocarpon HOM05D000142 ORTHO05D003173 1.4e-21 107.1 155 41.9
ECA246G3305 Erigeron canadensis HOM05D000142 ORTHO05D003173 2.4e-21 106.3 68 70.6
Gohir.D01G115900 Gossypium hirsutum HOM05D000142 ORTHO05D003173 2.4e-21 106.3 68 72.1
Lsat_1_v5_gn_6_104200 Lactuca sativa HOM05D000142 ORTHO05D003173 4.0e-21 105.5 68 70.6
Thecc.08G101100 Theobroma cacao HOM05D000142 ORTHO05D003173 8.9e-21 104.4 68 70.6
Gorai.002G141400 Gossypium raimondii HOM05D000142 ORTHO05D003173 1.2e-20 104.0 133 51.9
Nitab4.5_0009374g0020 Nicotiana tabacum HOM05D000142 ORTHO05D003173 1.2e-20 104.0 68 69.1
Nitab4.5_0003374g0010 Nicotiana tabacum HOM05D000142 ORTHO05D003173 1.5e-20 103.6 68 69.1
GSVIVG01009091001 Vitis vinifera HOM05D000142 ORTHO05D003173 1.5e-20 103.6 124 46.0
COL.COLO4_11999 Corchorus olitorius HOM05D000142 ORTHO05D003173 2.0e-20 103.2 68 70.6
MBI06_g03315_MAGBIO Magnolia biondii HOM05D000142 ORTHO05D003173 2.0e-20 103.2 66 69.7
Gohir.A01G128000 Gossypium hirsutum HOM05D000142 ORTHO05D003173 2.6e-20 102.8 141 43.3
COL.COLO4_12000 Corchorus olitorius HOM05D000142 ORTHO05D003173 3.4e-20 102.4 68 69.1
ClCG11G014360 Citrullus lanatus HOM05D000142 ORTHO05D003173 7.6e-20 101.3 143 44.1
Manes.18G063201 Manihot esculenta HOM05D000142 ORTHO05D003173 7.6e-20 101.3 68 66.2
Prupe.1G523800 Prunus persica HOM05D000142 ORTHO05D003173 9.9e-20 100.9 67 70.1
Duzib093G0467 Durio zibethinus HOM05D000142 ORTHO05D003173 1.7e-19 100.1 68 67.6
MELO3C003546.2 Cucumis melo HOM05D000142 ORTHO05D003173 2.2e-19 99.8 132 46.2
Peaxi162Scf00139g00013 Petunia axillaris HOM05D000142 ORTHO05D003173 2.2e-19 99.8 68 66.2
MSTRG.24440 Avicennia marina HOM05D000142 ORTHO05D003173 2.9e-19 99.4 65 72.3
CSS0025684 Camellia sinensis var. sinensis HOM05D000142 ORTHO05D003173 3.8e-19 99.0 138 44.9
DCAR_012880 Daucus carota HOM05D000142 ORTHO05D003173 3.8e-19 99.0 140 46.4
Lj4A727T38 Lonicera japonica HOM05D000142 ORTHO05D003173 3.8e-19 99.0 68 64.7
RcHm_v2.0_Chr7g0238361 Rosa chinensis HOM05D000142 ORTHO05D003173 3.8e-19 99.0 138 44.2
Atru.chr10.807 Acer truncatum HOM05D000142 ORTHO05D003173 4.9e-19 98.6 99 50.5
CsaV3_3G047760 Cucumis sativus L. HOM05D000142 ORTHO05D003173 6.4e-19 98.2 143 44.1
Lalb_Chr23g0270221 Lupinus albus HOM05D000142 ORTHO05D003173 6.4e-19 98.2 67 65.7
Lalb_Chr23g0270321 Lupinus albus HOM05D000142 ORTHO05D003173 6.4e-19 98.2 67 65.7
Cpa.g.sc36.188 Carica papaya HOM05D003707 ORTHO05D004309 8.4e-19 97.8 69 65.2
CiPaw.16G032600 Carya illinoinensis HOM05D000142 ORTHO05D003173 8.4e-19 97.8 135 42.2
THA.LOC104806797 Tarenaya hassleriana HOM05D000142 ORTHO05D003173 8.4e-19 97.8 68 63.2
FAN13G0478 Fragaria x ananassa HOM05D000142 ORTHO05D003173 1.1e-18 97.4 142 45.1
PGR031G2006 Punica granatum HOM05D000142 ORTHO05D003173 1.1e-18 97.4 134 44.0
Sed0024077 Sechium edule HOM05D000142 ORTHO05D003173 1.1e-18 97.4 68 64.7
arahy.Tifrunner.gnm1.ann1.X035RS Arachis hypogaea HOM05D000142 ORTHO05D003173 1.4e-18 97.1 133 42.9
Psat5g050360 Pisum sativum HOM05D000142 ORTHO05D003173 1.4e-18 97.1 68 63.2
FvH4_5g36390 Fragaria vesca HOM05D000142 ORTHO05D003173 2.4e-18 96.3 134 43.3
FAN18G3254 Fragaria x ananassa HOM05D000142 ORTHO05D003173 2.4e-18 96.3 134 43.3
Lj1g0017532 Lotus japonicus HOM05D000142 ORTHO05D003173 4.2e-18 95.5 68 63.2
CiPaw.15G045300 Carya illinoinensis HOM05D000142 ORTHO05D003173 5.4e-18 95.1 132 40.2
Migut.N02875 Erythranthe guttata HOM05D000142 ORTHO05D003173 5.4e-18 95.1 67 64.2
Glyma.06G100200 Glycine max HOM05D000142 ORTHO05D003173 5.4e-18 95.1 132 43.9
Sabra05G0122100 Salix brachista HOM05D000142 ORTHO05D003173 5.4e-18 95.1 143 44.1
AL6G41450 Arabidopsis lyrata HOM05D000142 ORTHO05D003173 7.1e-18 94.7 115 44.3
Lj4A96T44 Lonicera japonica HOM05D000142 ORTHO05D003173 7.1e-18 94.7 78 57.7
FAN04G2990 Fragaria x ananassa HOM05D000142 ORTHO05D003173 9.3e-18 94.4 134 42.5
Sopen00g007220 Solanum pennellii HOM05D000142 ORTHO05D003173 9.3e-18 94.4 65 64.6
Sopen04g029720 Solanum pennellii HOM05D000142 ORTHO05D003173 9.3e-18 94.4 65 64.6
Potri.005G161000 Populus trichocarpa HOM05D000142 ORTHO05D003173 1.2e-17 94.0 68 61.8
Phvul.009G033600 Phaseolus vulgaris HOM05D000142 ORTHO05D003173 1.6e-17 93.6 68 63.2
unitig_22.g5802 Utricularia gibba HOM05D000142 ORTHO05D003173 1.6e-17 93.6 65 66.2
Lalb_Chr11g0065251 Lupinus albus HOM05D000142 ORTHO05D003173 2.1e-17 93.2 66 65.2
Solyc04g074750.3 Solanum lycopersicum HOM05D000142 ORTHO05D003173 2.7e-17 92.8 65 63.1
Ciclev10001605m.g Citrus clementina HOM05D000142 ORTHO05D003173 3.5e-17 92.4 124 44.4
Eucgr.B00046 Eucalyptus grandis HOM05D000142 ORTHO05D003173 3.5e-17 92.4 67 62.7
VMungo1309G2392 Vigna mungo HOM05D000142 ORTHO05D003173 3.5e-17 92.4 68 61.8
Glyma.04G098600 Glycine max HOM05D000142 ORTHO05D003173 4.6e-17 92.0 124 45.2
PGSC0003DMG400030840 Solanum tuberosum HOM05D000142 ORTHO05D003173 4.6e-17 92.0 142 40.8
Aa31LG9G14720 Aethionema arabicum HOM05D000142 ORTHO05D003173 6.0e-17 91.7 68 58.8
CARHR260100 Cardamine hirsuta HOM05D000142 ORTHO05D003173 6.0e-17 91.7 67 61.2
TPR.G6340 Trifolium pratense HOM05D000142 ORTHO05D003173 7.8e-17 91.3 66 63.6
AT4G09040 Arabidopsis thaliana HOM05D000142 ORTHO05D003173 1.0e-16 90.9 67 59.7
MD08G1189900 Malus domestica HOM05D000142 ORTHO05D003173 1.0e-16 90.9 67 64.2
PSO675G4478 Papaver somniferum HOM05D000142 ORTHO05D003173 1.0e-16 90.9 65 63.1
CANSAT25G3832 Cannabis sativa HOM05D000142 ORTHO05D003173 1.3e-16 90.5 67 62.7
QL02p002278 Quercus lobata HOM05D000142 ORTHO05D003173 1.3e-16 90.5 68 57.4
Cfa017897 Carpinus fangiana HOM05D000142 ORTHO05D003173 1.7e-16 90.1 99 45.5
PSO541G2771 Papaver somniferum HOM05D000142 ORTHO05D003173 2.3e-16 89.7 65 61.5
Sc10g0005170 Simmondsia chinensis HOM05D000142 ORTHO05D003173 2.3e-16 89.7 66 59.1
TWI56G0053 Tripterygium wilfordii HOM05D000142 ORTHO05D003173 2.3e-16 89.7 68 58.8
Nn5g29983 Nelumbo nucifera HOM05D000142 ORTHO05D003173 5.1e-16 88.6 64 62.5
Sp6g08470 Schrenkiella parvula HOM05D000142 ORTHO05D003173 5.1e-16 88.6 68 57.4
TAR381G0467 Trochodendron aralioides HOM05D000142 ORTHO05D003173 5.1e-16 88.6 68 55.9
Ah.05g169610 Amaranthus hybridus HOM05D000142 ORTHO05D003173 6.6e-16 88.2 68 55.9
Thhalv10028847m.g Eutrema salsugineum HOM05D000142 ORTHO05D003173 6.6e-16 88.2 68 57.4
Medtr3g099590 Medicago truncatula HOM05D000142 ORTHO05D003173 8.7e-16 87.8 68 58.8
BcaC04g20945 Brassica carinata HOM05D000142 ORTHO05D003173 1.1e-15 87.4 68 57.4
A09p29590 Brassica napus HOM05D000142 ORTHO05D003173 1.1e-15 87.4 115 42.6
C09p37660 Brassica napus HOM05D000142 ORTHO05D003173 1.1e-15 87.4 68 57.4
BolC9t56596H Brassica oleracea HOM05D000142 ORTHO05D003173 1.1e-15 87.4 68 57.4
BraA09t38528Z Brassica rapa HOM05D000142 ORTHO05D003173 1.1e-15 87.4 115 42.6
EL10Ac1g01139 Beta vulgaris HOM05D000142 ORTHO05D003173 1.5e-15 87.0 68 58.8
Carub.0006s2763 Capsella rubella HOM05D000142 ORTHO05D003173 1.5e-15 87.0 68 57.4
AUR62018978 Chenopodium quinoa HOM05D000142 ORTHO05D003173 1.5e-15 87.0 68 57.4
CDE10G0261 Ceratophyllum demersum HOM05D000142 ORTHO05D003173 2.5e-15 86.3 68 54.4
Haze_18253 Corylus avellana HOM05D000142 ORTHO05D003173 2.5e-15 86.3 118 40.7
BcaB01g01379 Brassica carinata HOM05D000142 ORTHO05D003173 4.3e-15 85.5 68 54.4
CiPaw.15G147100 Carya illinoinensis HOM05D000142 ORTHO05D003173 7.3e-15 84.7 68 54.4
Hund26993 Selenicereus undatus HOM05D000142 ORTHO05D003173 7.3e-15 84.7 118 39.0
Os08g0483200 Oryza sativa ssp. japonica HOM05D000142 ORTHO05D003173 9.6e-15 84.3 67 55.2
Aqoxy6G00706 Aquilegia oxysepala HOM05D000142 ORTHO05D003173 1.3e-14 84.0 65 52.3
Ca_16034_v3 Cicer arietinum L. HOM05D000142 ORTHO05D003173 2.1e-14 83.2 110 43.6
arahy.Tifrunner.gnm1.ann1.DQ4GV3 Arachis hypogaea HOM05D000142 ORTHO05D003173 6.2e-14 81.6 150 37.3
CANSAT21G0195 Cannabis sativa HOM05D000142 ORTHO05D003173 7.1e-10 68.2 123 35.8
ATR0684G236 Amborella trichopoda HOM05D000142 ORTHO05D003173 2.7e-09 66.2 65 44.6
FAN08G0302 Fragaria x ananassa HOM05D000142 ORTHO05D003173 5.1e-08 62.0 43 67.4
CANSAT21G0512 Cannabis sativa HOM05D000142 ORTHO05D003173 1.9e-07 60.1 120 32.5
Hma1.2p1_1180F.1_g264690 Hydrangea macrophylla HOM05D000142 ORTHO05D003173 7.4e-07 58.2 34 79.4
Oeu006238.1 Olea europaea HOM05D000142 ORTHO05D003173 2.8e-06 56.2 141 31.9
Cc08_g02910 Coffea canephora HOM05D000142 ORTHO05D003173 3.7e-06 55.8 97 30.9
SGA_v2.0_scaffold36G14309 Striga asiatica HOM05D000142 ORTHO05D003173 8.1e-06 54.7 66 34.8


User provided reference genes

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