Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g22770 Coffea canephora HOM05D003884 ORTHO05D004482 6.6e-102 374.0 185 100.0
Oeu001657.1 Olea europaea HOM05D003884 ORTHO05D004482 2.9e-57 225.7 179 65.9
THA.LOC104819574 Tarenaya hassleriana HOM05D003884 ORTHO05D004482 2.9e-57 225.7 173 68.8
Nn4g22884 Nelumbo nucifera HOM05D003884 ORTHO05D004482 3.2e-56 222.2 182 64.8
TAR629G2251 Trochodendron aralioides HOM05D003884 ORTHO05D004482 4.2e-56 221.9 194 63.4
Duzib248G1092 Durio zibethinus HOM05D003884 ORTHO05D004482 9.3e-56 220.7 170 66.5
Gorai.005G185900 Gossypium raimondii HOM05D003884 ORTHO05D004482 3.5e-55 218.8 112 87.5
PGSC0003DMG400015599 Solanum tuberosum HOM05D003884 ORTHO05D004482 3.5e-55 218.8 186 64.5
Gohir.D02G165800 Gossypium hirsutum HOM05D003884 ORTHO05D004482 6.0e-55 218.0 112 87.5
Sc14g0008540 Simmondsia chinensis HOM05D003884 ORTHO05D004482 6.0e-55 218.0 115 86.1
Thecc.02G242500 Theobroma cacao HOM05D003884 ORTHO05D004482 6.0e-55 218.0 175 64.6
Aa31LG1G4430 Aethionema arabicum HOM05D003884 ORTHO05D004482 1.0e-54 217.2 187 63.6
Gohir.A03G142500 Gossypium hirsutum HOM05D003884 ORTHO05D004482 1.0e-54 217.2 108 89.8
Dinv30997 Davidia involucrata HOM05D003884 ORTHO05D004482 1.3e-54 216.9 113 86.7
Dinv31106 Davidia involucrata HOM05D003884 ORTHO05D004482 1.3e-54 216.9 113 86.7
CSS0013891 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.8e-54 216.5 124 80.6
Manes.05G090800 Manihot esculenta HOM05D003884 ORTHO05D004482 1.8e-54 216.5 178 64.6
Prupe.1G259800 Prunus persica HOM05D003884 ORTHO05D004482 1.8e-54 216.5 175 66.3
ClCG05G025040 Citrullus lanatus HOM05D003884 ORTHO05D004482 2.3e-54 216.1 119 83.2
Eucgr.B02560 Eucalyptus grandis HOM05D003884 ORTHO05D004482 2.3e-54 216.1 176 63.1
PGR119G0467 Punica granatum HOM05D003884 ORTHO05D004482 2.3e-54 216.1 123 79.7
Cpa.g.sc5.349 Carica papaya HOM05D003884 ORTHO05D004482 3.9e-54 215.3 176 64.2
Sopen05g002130 Solanum pennellii HOM05D003884 ORTHO05D004482 3.9e-54 215.3 185 63.2
Hma1.2p1_0160F.1_g070580 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 5.1e-54 214.9 111 89.2
Solyc05g006110.3 Solanum lycopersicum HOM05D003884 ORTHO05D004482 6.7e-54 214.5 185 61.6
COL.COLO4_38097 Corchorus olitorius HOM05D003884 ORTHO05D004482 1.5e-53 213.4 176 62.5
MELO3C012025.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.5e-53 213.4 122 78.7
GSVIVG01020172001 Vitis vinifera HOM05D003884 ORTHO05D004482 1.5e-53 213.4 185 62.7
Atru.chr11.1961 Acer truncatum HOM05D003884 ORTHO05D004482 1.9e-53 213.0 185 65.9
Ciclev10032870m.g Citrus clementina HOM05D003884 ORTHO05D004482 1.9e-53 213.0 165 63.6
MD16G1086800 Malus domestica HOM05D003884 ORTHO05D004482 2.5e-53 212.6 167 64.7
Sed0006672 Sechium edule HOM05D003884 ORTHO05D004482 3.3e-53 212.2 181 61.9
Glyma.18G132900 Glycine max HOM05D003884 ORTHO05D004482 1.3e-52 210.3 117 78.6
Nitab4.5_0000257g0220 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.6e-52 209.9 184 63.0
Carub.0001s0996 Capsella rubella HOM05D003884 ORTHO05D004482 2.1e-52 209.5 167 67.1
Rhsim12G0124300 Rhododendron simsii HOM05D003884 ORTHO05D004482 2.1e-52 209.5 200 62.0
Ah.03g132360 Amaranthus hybridus HOM05D003884 ORTHO05D004482 3.7e-52 208.8 177 61.0
CsaV3_5G031870 Cucumis sativus L. HOM05D003884 ORTHO05D004482 3.7e-52 208.8 121 76.9
Peaxi162Scf00421g00711 Petunia axillaris HOM05D003884 ORTHO05D004482 4.8e-52 208.4 189 62.4
RcHm_v2.0_Chr4g0444531 Rosa chinensis HOM05D003884 ORTHO05D004482 4.8e-52 208.4 117 80.3
MSTRG.622 Avicennia marina HOM05D003884 ORTHO05D004482 8.2e-52 207.6 155 65.8
CAN.G1160.2 Capsicum annuum HOM05D003884 ORTHO05D004482 1.1e-51 207.2 188 60.1
Aqoxy3G03081 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.4e-51 206.8 171 63.7
VMungo0251G2950 Vigna mungo HOM05D003884 ORTHO05D004482 1.4e-51 206.8 193 57.5
Actinidia08183 Actinidia chinensis HOM05D003884 ORTHO05D004482 2.4e-51 206.1 122 78.7
Sp1g09160 Schrenkiella parvula HOM05D003884 ORTHO05D004482 2.4e-51 206.1 109 84.4
FvH4_4g35001 Fragaria vesca HOM05D003884 ORTHO05D004482 4.1e-51 205.3 187 58.8
MD13G1086700 Malus domestica HOM05D003884 ORTHO05D004482 4.1e-51 205.3 174 62.1
Medtr8g063150 Medicago truncatula HOM05D003884 ORTHO05D004482 4.1e-51 205.3 175 60.6
Potri.010G094900 Populus trichocarpa HOM05D003884 ORTHO05D004482 4.1e-51 205.3 180 60.0
AT1G10522 Arabidopsis thaliana HOM05D003884 ORTHO05D004482 5.3e-51 204.9 183 61.7
CDE10G0847 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 5.3e-51 204.9 163 65.0
AUR62039407 Chenopodium quinoa HOM05D003884 ORTHO05D004482 6.9e-51 204.5 185 57.8
AL1G21330 Arabidopsis lyrata HOM05D003884 ORTHO05D004482 9.0e-51 204.1 178 63.5
Nitab4.5_0005722g0050 Nicotiana tabacum HOM05D003884 ORTHO05D004482 1.2e-50 203.8 189 58.7
EL10Ac4g10087 Beta vulgaris HOM05D003884 ORTHO05D004482 1.5e-50 203.4 177 60.5
Sabra10G0067200 Salix brachista HOM05D003884 ORTHO05D004482 1.5e-50 203.4 116 79.3
BcaC05g24933 Brassica carinata HOM05D003884 ORTHO05D004482 2.0e-50 203.0 181 60.8
A06p07300 Brassica napus HOM05D003884 ORTHO05D004482 2.0e-50 203.0 173 61.3
BraA06t23935Z Brassica rapa HOM05D003884 ORTHO05D004482 2.0e-50 203.0 173 61.3
TWI36G1174 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 2.0e-50 203.0 181 59.7
PSO832G2848 Papaver somniferum HOM05D003884 ORTHO05D004482 2.6e-50 202.6 119 78.2
Phvul.003G055100 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 2.6e-50 202.6 187 58.3
BcaC05g24871 Brassica carinata HOM05D003884 ORTHO05D004482 3.4e-50 202.2 109 81.7
C05p08810 Brassica napus HOM05D003884 ORTHO05D004482 3.4e-50 202.2 109 81.7
BolC5t29627H Brassica oleracea HOM05D003884 ORTHO05D004482 3.4e-50 202.2 109 81.7
DCAR_026554 Daucus carota HOM05D003884 ORTHO05D004482 3.4e-50 202.2 176 59.1
FAN12G1036 Fragaria x ananassa HOM05D003884 ORTHO05D004482 3.4e-50 202.2 187 58.3
Thhalv10008855m.g Eutrema salsugineum HOM05D003884 ORTHO05D004482 4.5e-50 201.8 182 59.9
FAN07G1004 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.5e-50 201.8 186 58.6
Lsat_1_v5_gn_3_49121 Lactuca sativa HOM05D003884 ORTHO05D004482 4.5e-50 201.8 178 61.8
PSO063G2462 Papaver somniferum HOM05D003884 ORTHO05D004482 5.9e-50 201.4 122 75.4
SGA_v2.0_scaffold8G04247 Striga asiatica HOM05D003884 ORTHO05D004482 5.9e-50 201.4 165 62.4
Lj4g0002760 Lotus japonicus HOM05D003884 ORTHO05D004482 7.6e-50 201.1 178 60.7
CARHR010670 Cardamine hirsuta HOM05D003884 ORTHO05D004482 1.0e-49 200.7 188 61.2
CiPaw.05G146300 Carya illinoinensis HOM05D003884 ORTHO05D004482 1.7e-49 199.9 180 59.4
HPP92_010213 Vanilla planifolia HOM05D003884 ORTHO05D004482 2.2e-49 199.5 171 58.5
Ca_22779_v3 Cicer arietinum L. HOM05D003884 ORTHO05D004482 5.0e-49 198.4 173 58.4
FAN22G1639 Fragaria x ananassa HOM05D005206 ORTHO05D006219 5.0e-49 198.4 109 82.6
arahy.Tifrunner.gnm1.ann1.FXM0G0 Arachis hypogaea HOM05D000677 ORTHO05D000727 8.5e-49 197.6 121 76.0
CDE10G0415 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 1.1e-48 197.2 175 62.9
Haze_12138 Corylus avellana HOM05D003884 ORTHO05D004482 1.1e-48 197.2 181 61.9
Actinidia27769 Actinidia chinensis HOM05D003884 ORTHO05D004482 1.4e-48 196.8 188 60.1
arahy.Tifrunner.gnm1.ann1.W247EX Arachis hypogaea HOM05D003884 ORTHO05D004482 2.5e-48 196.1 124 75.0
CANSAT11G1742 Cannabis sativa HOM05D003884 ORTHO05D004482 4.2e-48 195.3 187 59.4
Cfa009102 Carpinus fangiana HOM05D005206 ORTHO05D006219 5.5e-48 194.9 181 60.8
QL03p062483 Quercus lobata HOM05D003884 ORTHO05D004482 1.3e-46 190.3 125 68.8
Lj3A1049T56 Lonicera japonica HOM05D003884 ORTHO05D004482 1.8e-46 189.9 205 57.6
unitig_62.g23678 Utricularia gibba HOM05D003884 ORTHO05D004482 1.8e-46 189.9 112 80.4
Migut.L01446 Erythranthe guttata HOM05D003884 ORTHO05D004482 2.3e-46 189.5 181 57.5
Psat4g126120 Pisum sativum HOM05D003884 ORTHO05D004482 6.7e-46 188.0 182 56.6
Lalb_Chr05g0228011 Lupinus albus HOM05D003884 ORTHO05D004482 7.4e-45 184.5 187 54.0
ATR1149G058 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.1e-43 180.6 114 72.8
SalBow2G3534 Salvia bowleyana HOM05D005206 ORTHO05D006219 3.4e-42 175.6 155 54.8
SalBow2G1244 Salvia bowleyana HOM05D003884 ORTHO05D004482 4.5e-42 175.3 163 53.4
vmacro16279 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 1.7e-41 173.3 208 52.4
ECA238G2328 Erigeron canadensis HOM05D003884 ORTHO05D004482 1.9e-40 169.9 103 72.8
AUR62026580 Chenopodium quinoa HOM05D005206 ORTHO05D006219 4.2e-40 168.7 127 64.6
Zm00001eb098980 Zea mays HOM05D003884 ORTHO05D004482 2.8e-36 156.0 122 59.0
Os09g0382400 Oryza sativa ssp. japonica HOM05D003884 ORTHO05D004482 3.1e-35 152.5 129 56.6
Dinv24898 Davidia involucrata HOM05D003884 ORTHO05D004482 6.9e-35 151.4 147 53.7
TWI75G1604 Tripterygium wilfordii HOM05D003884 ORTHO05D004482 1.5e-34 150.2 122 59.0
CiPaw.05G149600 Carya illinoinensis HOM05D003884 ORTHO05D004482 2.0e-34 149.8 130 55.4
GSVIVG01020166001 Vitis vinifera HOM05D003884 ORTHO05D004482 2.6e-34 149.4 141 54.6
Nitab4.5_0004536g0010 Nicotiana tabacum HOM05D003884 ORTHO05D004482 3.4e-34 149.1 119 58.0
TAR622G0672 Trochodendron aralioides HOM05D003884 ORTHO05D004482 3.4e-34 149.1 176 47.2
HPP92_017073 Vanilla planifolia HOM05D003884 ORTHO05D004482 7.7e-34 147.9 107 61.7
CSS0028392 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.7e-33 146.7 139 54.0
Prupe.1G258900 Prunus persica HOM05D003884 ORTHO05D004482 2.2e-33 146.4 155 46.5
Gorai.009G344500 Gossypium raimondii HOM05D003884 ORTHO05D004482 8.5e-33 144.4 129 54.3
SGA_v2.0_scaffold87G27003 Striga asiatica HOM05D003884 ORTHO05D004482 8.5e-33 144.4 111 62.2
Manes.01G197000 Manihot esculenta HOM05D003884 ORTHO05D004482 1.1e-32 144.1 168 47.6
Sopen05g002070 Solanum pennellii HOM05D003884 ORTHO05D004482 1.1e-32 144.1 162 47.5
MSTRG.2381 Avicennia marina HOM05D003884 ORTHO05D004482 1.9e-32 143.3 107 58.9
PGSC0003DMG400015596 Solanum tuberosum HOM05D003884 ORTHO05D004482 1.9e-32 143.3 127 54.3
COL.COLO4_37908 Corchorus olitorius HOM05D003884 ORTHO05D004482 2.5e-32 142.9 188 45.7
Psat4g125600 Pisum sativum HOM05D003884 ORTHO05D004482 2.5e-32 142.9 108 61.1
Nitab4.5_0004033g0080 Nicotiana tabacum HOM05D003884 ORTHO05D004482 7.2e-32 141.4 111 60.4
Oeu001665.1 Olea europaea HOM05D003884 ORTHO05D004482 1.2e-31 140.6 128 53.9
Thecc.02G243200 Theobroma cacao HOM05D003884 ORTHO05D004482 1.2e-31 140.6 175 43.4
PSO161G0071 Papaver somniferum HOM05D003884 ORTHO05D004482 2.7e-31 139.4 175 45.1
Gohir.D05G321100 Gossypium hirsutum HOM05D003884 ORTHO05D004482 4.7e-31 138.7 120 55.8
Hma1.2p1_1017F.1_g248220 Hydrangea macrophylla HOM05D003884 ORTHO05D004482 4.7e-31 138.7 110 58.2
Rhsim12G0124000 Rhododendron simsii HOM05D003884 ORTHO05D004482 4.7e-31 138.7 125 52.8
FAN22G1839 Fragaria x ananassa HOM05D003884 ORTHO05D004482 6.1e-31 138.3 177 45.8
PSO478G1563 Papaver somniferum HOM05D003884 ORTHO05D004482 6.1e-31 138.3 179 44.7
FvH4_4g34960 Fragaria vesca HOM05D003884 ORTHO05D004482 7.9e-31 137.9 112 58.0
FAN12G0178 Fragaria x ananassa HOM05D003884 ORTHO05D004482 7.9e-31 137.9 112 58.0
FAN17G0777 Fragaria x ananassa HOM05D003884 ORTHO05D004482 7.9e-31 137.9 182 45.6
Gohir.A05G318900 Gossypium hirsutum HOM05D003884 ORTHO05D004482 7.9e-31 137.9 172 45.9
Sed0027154 Sechium edule HOM05D003884 ORTHO05D004482 7.9e-31 137.9 109 57.8
Aqoxy3G00923 Aquilegia oxysepala HOM05D003884 ORTHO05D004482 1.0e-30 137.5 107 59.8
Haze_12163 Corylus avellana HOM05D003884 ORTHO05D004482 1.0e-30 137.5 121 55.4
Glyma.08G290900 Glycine max HOM05D003884 ORTHO05D004482 1.0e-30 137.5 164 45.7
Duzib248G1263 Durio zibethinus HOM05D003884 ORTHO05D004482 3.0e-30 136.0 112 55.4
Medtr8g063190 Medicago truncatula HOM05D003884 ORTHO05D004482 3.0e-30 136.0 183 44.3
ATR1149G127 Amborella trichopoda HOM05D003884 ORTHO05D004482 1.1e-29 134.0 143 50.3
Cpa.g.sc5.356 Carica papaya HOM05D003884 ORTHO05D004482 1.1e-29 134.0 112 58.0
CsaV3_5G031830 Cucumis sativus L. HOM05D003884 ORTHO05D004482 1.1e-29 134.0 129 50.4
Migut.E00143 Erythranthe guttata HOM05D003884 ORTHO05D004482 1.1e-29 134.0 108 51.9
FAN07G1775 Fragaria x ananassa HOM05D003884 ORTHO05D004482 4.4e-29 132.1 184 44.0
Lsat_1_v5_gn_3_49081 Lactuca sativa HOM05D003884 ORTHO05D004482 7.4e-29 131.3 108 57.4
AUR62026600 Chenopodium quinoa HOM05D003884 ORTHO05D004482 1.7e-28 130.2 145 48.3
CDE05G1492 Ceratophyllum demersum HOM05D003884 ORTHO05D004482 8.2e-28 127.9 143 44.8
Peaxi162Scf00421g00615 Petunia axillaris HOM05D003884 ORTHO05D004482 8.2e-28 127.9 131 47.3
MBI15_g16616_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.4e-27 127.1 96 63.5
Lj4g0012912 Lotus japonicus HOM05D003884 ORTHO05D004482 2.4e-27 126.3 108 54.6
MD16G1087000 Malus domestica HOM05D003884 ORTHO05D004482 4.1e-27 125.6 59 91.5
ClCG05G025070 Citrullus lanatus HOM05D003884 ORTHO05D004482 7.0e-27 124.8 146 44.5
MELO3C012022.2 Cucumis melo HOM05D003884 ORTHO05D004482 1.2e-26 124.0 146 44.5
MBI15_g14835_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 1.6e-26 123.6 59 93.2
VMungo0251G0159 Vigna mungo HOM05D003884 ORTHO05D004482 2.0e-26 123.2 196 39.3
MBI15_g45678_MAGBIO Magnolia biondii HOM05D003884 ORTHO05D004482 2.9e-25 119.4 104 58.7
Atru.chr11.1968 Acer truncatum HOM05D003884 ORTHO05D004482 5.0e-25 118.6 109 56.0
Phvul.003G054800 Phaseolus vulgaris HOM05D003884 ORTHO05D004482 5.0e-25 118.6 164 43.3
Hund25320 Selenicereus undatus HOM05D003884 ORTHO05D004482 1.1e-24 117.5 108 51.9
ECA246G1403 Erigeron canadensis HOM05D003884 ORTHO05D004482 3.2e-24 115.9 176 38.6
QL03p062328 Quercus lobata HOM05D003884 ORTHO05D004482 2.3e-22 109.8 244 32.0
arahy.Tifrunner.gnm1.ann1.9N1GR3 Arachis hypogaea HOM05D003884 ORTHO05D004482 1.5e-21 107.1 116 47.4
arahy.Tifrunner.gnm1.ann1.QD9WVF Arachis hypogaea HOM05D003884 ORTHO05D004482 1.5e-21 107.1 116 47.4
vmacro16296 Vaccinium macrocarpon HOM05D003884 ORTHO05D004482 2.0e-21 106.7 98 58.2
Medtr2g099400 Medicago truncatula HOM05D000001 ORTHO05D011365 7.5e-21 104.8 57 77.2
TPR.G35986 Trifolium pratense HOM05D003884 ORTHO05D004482 2.8e-20 102.8 63 71.4
CDE10G0535 Ceratophyllum demersum HOM05D007469 ORTHO05D003360 3.7e-20 102.4 178 41.0
QL03p062368 Quercus lobata HOM05D003884 ORTHO05D004482 1.1e-19 100.9 267 29.2
EL10Ac6g13616 Beta vulgaris HOM05D000625 ORTHO05D000467 7.0e-19 98.2 93 50.5
PGR102G1298 Punica granatum HOM05D003884 ORTHO05D004482 1.2e-18 97.4 114 43.9
TPR.G40428 Trifolium pratense HOM05D003884 ORTHO05D004482 6.5e-17 91.7 62 64.5
TPR.G39492 Trifolium pratense HOM05D003884 ORTHO05D004482 2.0e-13 80.1 114 43.9
CSS0008150 Camellia sinensis var. sinensis HOM05D003884 ORTHO05D004482 1.8e-11 73.6 78 47.4
AagrBONN_evm.TU.Sc2ySwM_368.3177 Anthoceros agrestis HOM05D003884 ORTHO05D004482 2.0e-10 70.1 98 36.7
CAN.G1248.1 Capsicum annuum HOM05D003884 ORTHO05D004482 2.3e-09 66.6 58 56.9
MD13G1087300 Malus domestica HOM05D003884 ORTHO05D004482 6.5e-09 65.1 74 47.3
Oeu001664.1 Olea europaea HOM05D003884 ORTHO05D004482 8.6e-09 64.7 69 47.8
RcHm_v2.0_Chr4g0444421 Rosa chinensis HOM05D003884 ORTHO05D004482 2.8e-07 59.7 96 38.5
Lalb_Chr05g0217181 Lupinus albus HOM05D003884 ORTHO05D004482 3.6e-07 59.3 69 46.4
Nn3g16971 Nelumbo nucifera HOM05D003884 ORTHO05D004482 1.0e-06 57.8 117 37.6
Cc11_g14300 Coffea canephora HOM05D003884 ORTHO05D004482 1.8e-06 57.0 47 55.3
Medtr7g101780 Medicago truncatula HOM05D001475 ORTHO05D001525 1.8e-06 57.0 51 54.9
AUR62005315 Chenopodium quinoa HOM05D003884 ORTHO05D004482 6.8e-06 55.1 82 40.2


User provided reference genes

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