Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g17690 Coffea canephora HOM05D006435 ORTHO05D008262 1.8e-157 559.3 298 100.0
CSS0040195 Camellia sinensis var. sinensis HOM05D006435 ORTHO05D008262 8.1e-110 401.0 256 79.3
Hma1.2p1_0140F.1_g063520 Hydrangea macrophylla HOM05D006435 ORTHO05D008262 7.6e-108 394.4 260 77.7
GSVIVG01035670001 Vitis vinifera HOM05D006435 ORTHO05D008262 7.6e-108 394.4 274 72.3
QL12p026394 Quercus lobata HOM05D006435 ORTHO05D008262 1.3e-107 393.7 282 72.0
vmacro11085 Vaccinium macrocarpon HOM05D006435 ORTHO05D008262 7.9e-105 384.4 276 71.4
Oeu063249.1 Olea europaea HOM05D006435 ORTHO05D008262 1.0e-104 384.0 261 76.6
PGSC0003DMG400014515 Solanum tuberosum HOM05D006435 ORTHO05D008262 1.0e-104 384.0 240 81.7
Solyc08g068270.3 Solanum lycopersicum HOM05D006435 ORTHO05D008262 5.1e-104 381.7 258 79.1
Sopen08g022120 Solanum pennellii HOM05D006435 ORTHO05D008262 5.1e-104 381.7 223 86.1
TWI32G0701 Tripterygium wilfordii HOM05D006435 ORTHO05D008262 3.3e-103 379.0 235 80.4
CiPaw.07G207200 Carya illinoinensis HOM05D006435 ORTHO05D008262 4.3e-103 378.6 281 69.8
Rhsim02G0182200 Rhododendron simsii HOM05D006435 ORTHO05D008262 2.8e-102 375.9 276 72.1
arahy.Tifrunner.gnm1.ann1.463B8J Arachis hypogaea HOM05D006435 ORTHO05D008262 4.8e-102 375.2 261 74.3
arahy.Tifrunner.gnm1.ann1.W16L9Q Arachis hypogaea HOM05D006435 ORTHO05D008262 8.1e-102 374.4 261 74.3
Potri.018G037300 Populus trichocarpa HOM05D006435 ORTHO05D008262 1.4e-101 373.6 269 72.9
Actinidia31221 Actinidia chinensis HOM05D006435 ORTHO05D008262 2.4e-101 372.9 274 70.4
Nitab4.5_0003338g0080 Nicotiana tabacum HOM05D006435 ORTHO05D008262 2.4e-101 372.9 276 71.0
Thecc.09G039800 Theobroma cacao HOM05D006435 ORTHO05D008262 5.3e-101 371.7 285 70.2
Dinv30253 Davidia involucrata HOM05D006435 ORTHO05D004219 6.9e-101 371.3 261 76.2
THA.LOC104815054 Tarenaya hassleriana HOM05D006435 ORTHO05D008262 6.9e-101 371.3 233 78.1
AUR62009330 Chenopodium quinoa HOM05D006435 ORTHO05D008262 2.6e-100 369.4 250 77.2
Sp2g21890 Schrenkiella parvula HOM05D006435 ORTHO05D008262 4.5e-100 368.6 277 69.0
Ah.16g105260 Amaranthus hybridus HOM05D006435 ORTHO05D008262 5.8e-100 368.2 227 81.5
Ciclev10009372m.g Citrus clementina HOM05D006435 ORTHO05D008262 5.8e-100 368.2 227 78.0
Cfa013344 Carpinus fangiana HOM05D006435 ORTHO05D008262 7.6e-100 367.9 274 70.8
CAN.G797.1 Capsicum annuum HOM05D006435 ORTHO05D008262 9.9e-100 367.5 259 76.1
Gohir.D05G050300 Gossypium hirsutum HOM05D006435 ORTHO05D008262 9.9e-100 367.5 236 77.5
Lj8C603T5 Lonicera japonica HOM05D006435 ORTHO05D008262 9.9e-100 367.5 272 72.4
MELO3C003582.2 Cucumis melo HOM05D006435 ORTHO05D008262 4.9e-99 365.2 281 68.3
Nn2g11721 Nelumbo nucifera HOM05D006435 ORTHO05D008262 4.9e-99 365.2 284 68.7
Duzib187G0700 Durio zibethinus HOM05D006435 ORTHO05D008262 6.4e-99 364.8 271 70.1
Manes.03G062800 Manihot esculenta HOM05D006435 ORTHO05D008262 1.1e-98 364.0 263 71.5
Glyma.17G190400 Glycine max HOM05D006435 ORTHO05D008262 1.4e-98 363.6 250 74.8
Carub.0006s2947 Capsella rubella HOM05D006435 ORTHO05D008262 2.4e-98 362.8 268 67.5
VMungo0647G0379 Vigna mungo HOM05D006435 ORTHO05D008262 2.4e-98 362.8 248 74.2
Cpa.g.sc78.80 Carica papaya HOM05D006435 ORTHO05D008262 3.2e-98 362.5 253 71.1
Atru.chr7.2160 Acer truncatum HOM05D006435 ORTHO05D008262 5.5e-98 361.7 279 68.1
SGA_v2.0_scaffold280G46829 Striga asiatica HOM05D006435 ORTHO05D008262 5.5e-98 361.7 263 73.0
BcaB07g29986 Brassica carinata HOM05D006435 ORTHO05D008262 7.1e-98 361.3 260 71.5
Lalb_Chr22g0360991 Lupinus albus HOM05D006435 ORTHO05D008262 7.1e-98 361.3 222 81.5
AUR62023016 Chenopodium quinoa HOM05D006435 ORTHO05D008262 1.2e-97 360.5 212 85.4
CANSAT80G2129 Cannabis sativa HOM05D006435 ORTHO05D008262 2.1e-97 359.8 261 71.3
C02p59390 Brassica napus HOM05D006435 ORTHO05D008262 2.7e-97 359.4 262 72.1
AL6G37530 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 4.6e-97 358.6 226 77.4
BcaC03g17897 Brassica carinata HOM05D006435 ORTHO05D008262 6.0e-97 358.2 262 71.8
Gohir.A05G048400 Gossypium hirsutum HOM05D006435 ORTHO05D008262 6.0e-97 358.2 228 77.6
CARHR187680 Cardamine hirsuta HOM05D006435 ORTHO05D008262 1.0e-96 357.5 226 77.4
BraA02t08928Z Brassica rapa HOM05D006435 ORTHO05D008262 1.3e-96 357.1 274 68.6
SalBow4G2069 Salvia bowleyana HOM05D006435 ORTHO05D008262 1.3e-96 357.1 218 81.7
Lj1g0009240 Lotus japonicus HOM05D006435 ORTHO05D008262 1.8e-96 356.7 268 69.4
Thhalv10004692m.g Eutrema salsugineum HOM05D006435 ORTHO05D008262 2.3e-96 356.3 262 70.2
Lsat_1_v5_gn_6_10980 Lactuca sativa HOM05D006435 ORTHO05D008262 3.0e-96 355.9 222 79.7
Prupe.1G452600 Prunus persica HOM05D006435 ORTHO05D008262 3.0e-96 355.9 279 68.5
Hund19545 Selenicereus undatus HOM05D006435 ORTHO05D008262 3.0e-96 355.9 230 77.8
DCAR_007705 Daucus carota HOM05D006435 ORTHO05D008262 3.9e-96 355.5 215 80.5
HPP92_001799 Vanilla planifolia HOM05D006435 ORTHO05D008262 8.7e-96 354.4 223 79.4
Aqoxy7G01634 Aquilegia oxysepala HOM05D006435 ORTHO05D008262 1.5e-95 353.6 258 70.2
Medtr1g008300 Medicago truncatula HOM05D006435 ORTHO05D008262 1.9e-95 353.2 252 72.2
Gorai.009G051800 Gossypium raimondii HOM05D006435 ORTHO05D008262 2.5e-95 352.8 225 77.8
HanXRQChr02g0048091 Helianthus annuus HOM05D006435 ORTHO05D008262 2.5e-95 352.8 223 78.5
MBI01_g28042_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 5.6e-95 351.7 290 65.2
Aa31LG11G4730 Aethionema arabicum HOM05D006435 ORTHO05D008262 7.4e-95 351.3 282 65.6
MSTRG.11716 Avicennia marina HOM05D006435 ORTHO05D008262 9.6e-95 350.9 232 77.6
Sed0025420 Sechium edule HOM05D006435 ORTHO05D008262 1.3e-94 350.5 218 80.3
CsaV3_3G047410 Cucumis sativus L. HOM05D006435 ORTHO05D008262 4.8e-94 348.6 218 80.7
MD15G1097700 Malus domestica HOM05D006435 ORTHO05D008262 8.1e-94 347.8 256 71.1
RcHm_v2.0_Chr6g0305751 Rosa chinensis HOM05D006435 ORTHO05D008262 3.1e-93 345.9 277 65.3
FvH4_2g36120 Fragaria vesca HOM05D006435 ORTHO05D008262 2.0e-92 343.2 273 64.8
Eucgr.C01580 Eucalyptus grandis HOM05D006435 ORTHO05D008262 5.8e-92 341.7 271 66.8
EL10Ac2g04073 Beta vulgaris HOM05D006435 ORTHO05D008262 1.7e-91 340.1 211 80.1
CDE05G2477 Ceratophyllum demersum HOM05D006435 ORTHO05D008262 1.7e-91 340.1 226 73.9
TPR.G12017 Trifolium pratense HOM05D006435 ORTHO05D008262 1.7e-91 340.1 246 73.2
PSO832G3386 Papaver somniferum HOM05D006435 ORTHO05D008262 2.2e-91 339.7 278 66.5
VMungo1215G1854 Vigna mungo HOM05D006435 ORTHO05D008262 2.2e-91 339.7 277 67.1
ATR0315G035 Amborella trichopoda HOM05D006435 ORTHO05D008262 2.5e-90 336.3 258 66.7
PSO782G5114 Papaver somniferum HOM05D006435 ORTHO05D008262 5.5e-90 335.1 278 65.5
Phvul.001G078600 Phaseolus vulgaris HOM05D006435 ORTHO05D008262 5.5e-90 335.1 277 67.1
FAN27G2865 Fragaria x ananassa HOM05D006435 ORTHO05D008262 9.3e-90 334.3 277 63.9
Migut.A00245 Erythranthe guttata HOM05D006435 ORTHO05D008262 1.2e-89 334.0 246 70.3
ECA233G4084 Erigeron canadensis HOM05D006435 ORTHO05D008262 3.5e-89 332.4 264 67.4
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 1.3e-88 330.5 232 72.0
Sc09g0009090 Simmondsia chinensis HOM05D006435 ORTHO05D008262 7.4e-87 324.7 216 74.1
COL.COLO4_18696 Corchorus olitorius HOM05D006435 ORTHO05D008262 4.1e-85 318.9 233 70.4
SEGI_13627 Sequoiadendron giganteum HOM05D006435 ORTHO05D008262 1.3e-83 313.9 254 65.0
FAN20G0337 Fragaria x ananassa HOM05D006435 ORTHO05D008262 2.1e-81 306.6 211 73.0
Zm00001eb350490 Zea mays HOM05D006435 ORTHO05D008262 1.4e-77 293.9 273 56.4
Haze_21849 Corylus avellana HOM05D006435 ORTHO05D008262 2.4e-77 293.1 199 76.9
Os05g0220600 Oryza sativa ssp. japonica HOM05D006435 ORTHO05D008262 9.0e-77 291.2 226 66.8
PGR031G0325 Punica granatum HOM05D006435 ORTHO05D008262 5.9e-76 288.5 215 68.8
Eucgr.L02138 Eucalyptus grandis HOM05D006435 ORTHO05D008262 7.9e-73 278.1 271 59.0
TAR624G0864 Trochodendron aralioides HOM05D006435 ORTHO05D008262 1.8e-72 276.9 167 83.2
Psat6g034280 Pisum sativum HOM05D006435 ORTHO05D008262 2.3e-72 276.6 226 65.9
Pp3c15_3110 Physcomitrium patens HOM05D006435 ORTHO05D008262 6.7e-72 275.0 278 56.5
Mapoly0109s0030 Marchantia polymorpha HOM05D006435 ORTHO05D008262 5.7e-71 271.9 217 65.9
AL6G37520 Arabidopsis lyrata HOM05D006435 ORTHO05D008262 2.8e-70 269.6 268 55.2
AagrBONN_evm.TU.Sc2ySwM_117.700 Anthoceros agrestis HOM05D006435 ORTHO05D008262 3.7e-70 269.2 208 67.8
Solyc10g012245.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 3.7e-70 269.2 207 70.5
Nitab4.5_0000052g0140 Nicotiana tabacum HOM05D006435 ORTHO05D008262 6.3e-70 268.5 305 54.4
AT5G25640 Arabidopsis thaliana HOM05D006435 ORTHO05D008262 4.1e-69 265.8 265 54.3
Carub.0006s2351 Capsella rubella HOM05D006435 ORTHO05D008262 1.3e-67 260.8 236 57.2
SMO116G0425 Selaginella moellendorffii HOM05D006435 ORTHO05D008262 3.2e-66 256.1 208 63.0
ClCG11G014010 Citrullus lanatus HOM05D006435 ORTHO05D008262 1.0e-56 224.6 270 50.4
Ciclev10010273m.g Citrus clementina HOM05D006435 ORTHO05D008262 1.4e-56 224.2 158 72.2
Peaxi162Scf00523g00529 Petunia axillaris HOM05D006435 ORTHO05D008262 3.3e-55 219.5 141 82.3
MBI01_g28043_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 7.5e-55 218.4 216 58.3
Ca_12811_v3 Cicer arietinum L. HOM05D006435 ORTHO05D008262 1.1e-50 204.5 139 77.0
Glyma.14G141900 Glycine max HOM05D006435 ORTHO05D008262 2.0e-44 183.7 111 87.4
Sabra18G0038100 Salix brachista HOM05D006435 ORTHO05D008262 2.0e-44 183.7 257 45.5
PSO782G5630 Papaver somniferum HOM05D006435 ORTHO05D008262 1.3e-43 181.0 197 48.7
Peaxi162Scf00523g00528 Petunia axillaris HOM05D006435 ORTHO05D008262 2.5e-42 176.8 132 71.2
PRCOL_00005434 Prasinoderma coloniale HOM05D006435 ORTHO05D008262 1.4e-37 161.0 189 43.9
PSO782G2728 Papaver somniferum HOM05D006435 ORTHO05D008262 1.6e-36 157.5 202 41.6
Cre16.g664801 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D008262 1.3e-35 154.5 237 38.8
A02p39610 Brassica napus HOM05D006435 ORTHO05D008262 9.5e-34 148.3 138 57.2
FAN15G2703 Fragaria x ananassa HOM05D006435 ORTHO05D008262 4.9e-30 136.0 141 49.6
Solyc10g012295.1 Solanum lycopersicum HOM05D006435 ORTHO05D008262 2.5e-26 123.6 91 73.6
PSO832G3154 Papaver somniferum HOM05D006435 ORTHO05D008262 7.3e-26 122.1 202 38.6
MD08G1118500 Malus domestica HOM05D006435 ORTHO05D008262 7.0e-21 105.5 85 64.7
MBI01_g46977_MAGBIO Magnolia biondii HOM05D006435 ORTHO05D008262 3.6e-17 93.2 76 68.4
Haze_21850 Corylus avellana HOM05D006435 ORTHO05D008262 7.8e-12 75.5 86 50.0
Glyma.14G142000 Glycine max HOM05D006435 ORTHO05D008262 3.3e-10 70.1 70 51.4
Ca_12801_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 2.1e-09 67.4 81 49.4
Cre12.g546200 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D146483 1.8e-08 64.3 187 29.9
Cre11.g467648 Chlamydomonas reinhardtii HOM05D006435 ORTHO05D143948 3.1e-08 63.5 98 33.7
Lalb_Chr22g0350911 Lupinus albus HOM05D000659 ORTHO05D000505 2.0e-07 60.8 166 33.1
Lalb_Chr14g0373771 Lupinus albus HOM05D000659 ORTHO05D000505 3.4e-07 60.1 162 34.0
Potri.006G086300 Populus trichocarpa HOM05D000659 ORTHO05D000505 7.6e-07 58.9 143 31.5
HPP92_026923 Vanilla planifolia HOM05D000659 ORTHO05D000505 7.6e-07 58.9 179 29.6
Cc06_g02550 Coffea canephora HOM05D000659 ORTHO05D000505 1.3e-06 58.2 156 32.7
Os04g0569300 Oryza sativa ssp. japonica HOM05D000659 ORTHO05D000505 1.3e-06 58.2 152 30.9
PGR004G1090 Punica granatum HOM05D000659 ORTHO05D000505 1.7e-06 57.8 147 31.3
Rhsim04G0157700 Rhododendron simsii HOM05D000659 ORTHO05D000505 2.2e-06 57.4 147 32.0
Hund04948 Selenicereus undatus HOM05D000659 ORTHO05D000505 2.2e-06 57.4 192 29.7
vmacro08649 Vaccinium macrocarpon HOM05D000659 ORTHO05D000505 2.2e-06 57.4 147 32.0
CAN.G499.4 Capsicum annuum HOM05D000659 ORTHO05D000505 3.8e-06 56.6 182 30.8
Zm00001eb164560 Zea mays HOM05D000659 ORTHO05D000505 3.8e-06 56.6 167 29.3
Gohir.D09G150900 Gossypium hirsutum HOM05D000659 ORTHO05D000505 4.9e-06 56.2 142 32.4
Gorai.006G172200 Gossypium raimondii HOM05D000659 ORTHO05D000505 4.9e-06 56.2 142 32.4
AL1G24340 Arabidopsis lyrata HOM05D000659 ORTHO05D000505 6.4e-06 55.8 146 32.2
MSTRG.5657 Avicennia marina HOM05D000659 ORTHO05D000505 6.4e-06 55.8 180 27.2
BcaC04g22473 Brassica carinata HOM05D000659 ORTHO05D000505 6.4e-06 55.8 182 28.6
C09p18900 Brassica napus HOM05D000659 ORTHO05D000505 6.4e-06 55.8 182 28.6
AUR62009562 Chenopodium quinoa HOM05D000659 ORTHO05D000505 6.4e-06 55.8 152 32.2
COL.COLO4_14787 Corchorus olitorius HOM05D000659 ORTHO05D000505 6.4e-06 55.8 168 30.4
FAN26G1534 Fragaria x ananassa HOM05D000659 ORTHO05D000505 6.4e-06 55.8 139 30.9
Sed0002997 Sechium edule HOM05D000659 ORTHO05D000505 6.4e-06 55.8 175 31.4
BraA10t44950Z Brassica rapa HOM05D000659 ORTHO05D000505 8.4e-06 55.5 154 33.1
AUR62001774 Chenopodium quinoa HOM05D000659 ORTHO05D000505 8.4e-06 55.5 152 32.2
Manes.09G093300 Manihot esculenta HOM05D000659 ORTHO05D000505 8.4e-06 55.5 139 31.7


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