Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g08630 Coffea canephora HOM05D001562 ORTHO05D001437 1.0e-142 510.4 326 100.0
Duzib106G1733 Durio zibethinus HOM05D001562 ORTHO05D001437 5.8e-53 212.2 302 53.3
Duzib177G1059 Durio zibethinus HOM05D001562 ORTHO05D001437 1.9e-51 207.2 296 54.4
Prupe.7G025900 Prunus persica HOM05D001562 ORTHO05D001437 3.1e-46 189.9 295 54.2
COL.COLO4_33469 Corchorus olitorius HOM05D001562 ORTHO05D001437 3.4e-45 186.4 305 50.2
Gorai.007G252400 Gossypium raimondii HOM05D001562 ORTHO05D001437 5.9e-45 185.7 283 53.4
Gohir.D11G238400 Gossypium hirsutum HOM05D001562 ORTHO05D001437 5.0e-44 182.6 283 53.0
Solyc11g012740.2 Solanum lycopersicum HOM05D001562 ORTHO05D001437 1.9e-43 180.6 292 49.0
Sopen11g007480 Solanum pennellii HOM05D001562 ORTHO05D001437 1.9e-43 180.6 292 49.0
Dinv14556 Davidia involucrata HOM05D001562 ORTHO05D001437 2.5e-43 180.3 306 51.6
MD12G1014900 Malus domestica HOM05D001562 ORTHO05D001437 2.1e-42 177.2 281 52.7
Lalb_Chr21g0317331 Lupinus albus HOM05D001562 ORTHO05D001437 3.6e-42 176.4 301 48.2
MD14G1012500 Malus domestica HOM05D001562 ORTHO05D001437 3.6e-42 176.4 279 49.8
Duzib128G1788 Durio zibethinus HOM05D001562 ORTHO05D001437 7.9e-42 175.3 288 51.0
Lalb_Chr06g0174171 Lupinus albus HOM05D001562 ORTHO05D001437 1.4e-41 174.5 303 46.9
Oeu039190.1 Olea europaea HOM05D001562 ORTHO05D001437 1.4e-41 174.5 304 51.3
Atru.chr2.1611 Acer truncatum HOM05D001562 ORTHO05D001437 3.0e-41 173.3 295 51.5
Cfa019883 Carpinus fangiana HOM05D001562 ORTHO05D001437 6.7e-41 172.2 303 47.9
QL07p016005 Quercus lobata HOM05D001562 ORTHO05D001437 2.8e-39 166.8 300 47.7
Ciclev10031118m.g Citrus clementina HOM05D001562 ORTHO05D001437 3.1e-38 163.3 304 51.3
Lalb_Chr14g0365071 Lupinus albus HOM05D001562 ORTHO05D001437 9.1e-38 161.8 340 44.7
CiPaw.09G053200 Carya illinoinensis HOM05D001562 ORTHO05D001437 1.5e-37 161.0 296 49.0
Glyma.05G087600 Glycine max HOM05D001562 ORTHO05D001437 3.8e-36 156.4 304 45.7
MSTRG.6265 Avicennia marina HOM05D001562 ORTHO05D001437 4.2e-35 152.9 297 45.8
Phvul.001G102901 Phaseolus vulgaris HOM05D001562 ORTHO05D001437 4.2e-35 152.9 295 46.4
Medtr6g027180 Medicago truncatula HOM05D001562 ORTHO05D001437 5.5e-35 152.5 306 45.8
TAR633G0613 Trochodendron aralioides HOM05D001562 ORTHO05D001437 9.4e-35 151.8 306 47.1
VMungo1383G0082 Vigna mungo HOM05D001562 ORTHO05D001437 1.2e-34 151.4 295 45.8
arahy.Tifrunner.gnm1.ann1.F8BNUE Arachis hypogaea HOM05D001562 ORTHO05D001437 1.4e-33 147.9 341 42.2
arahy.Tifrunner.gnm1.ann1.UT2HDF Arachis hypogaea HOM05D001562 ORTHO05D001437 1.4e-33 147.9 341 42.2
Nitab4.5_0001296g0060 Nicotiana tabacum HOM05D001562 ORTHO05D001437 1.4e-33 147.9 251 50.6
Ca_04454_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 3.0e-33 146.7 307 44.3
Peaxi162Scf00827g00063 Petunia axillaris HOM05D001562 ORTHO05D001437 3.9e-33 146.4 372 40.3
Dinv37043 Davidia involucrata HOM05D001562 ORTHO05D001437 1.1e-32 144.8 236 53.4
Hma1.2p1_0165F.1_g073360 Hydrangea macrophylla HOM05D001562 ORTHO05D001437 3.3e-32 143.3 342 46.2
RcHm_v2.0_Chr3g0495551 Rosa chinensis HOM05D001562 ORTHO05D001437 7.4e-32 142.1 300 44.0
DCAR_016950 Daucus carota HOM05D001562 ORTHO05D001437 2.8e-31 140.2 299 42.1
TPR.G33954 Trifolium pratense HOM05D001562 ORTHO05D001437 2.8e-31 140.2 299 38.5
CsaV3_3G039620 Cucumis sativus L. HOM05D001562 ORTHO05D001437 6.3e-31 139.0 303 43.9
Eucgr.A02162 Eucalyptus grandis HOM05D001562 ORTHO05D001437 3.1e-30 136.7 299 43.5
MELO3C009704.2 Cucumis melo HOM05D001562 ORTHO05D001437 5.3e-30 136.0 304 43.4
PGR042G2556 Punica granatum HOM05D001562 ORTHO05D001437 9.1e-30 135.2 294 43.5
Gohir.A11G224900 Gossypium hirsutum HOM05D001562 ORTHO05D001437 1.5e-29 134.4 280 37.1
Thecc.05G236800 Theobroma cacao HOM05D001562 ORTHO05D001437 1.5e-29 134.4 222 53.6
SalBow1G3436 Salvia bowleyana HOM05D001562 ORTHO05D001437 3.4e-29 133.3 303 43.6
Manes.09G134600 Manihot esculenta HOM05D001562 ORTHO05D001437 1.3e-28 131.3 298 45.0
CANSAT64G1075 Cannabis sativa HOM05D001562 ORTHO05D001437 1.7e-28 131.0 281 38.8
Glyma.03G004900 Glycine max HOM05D001562 ORTHO05D001437 6.5e-28 129.0 295 41.4
Psat1g088240 Pisum sativum HOM05D001562 ORTHO05D001437 6.5e-28 129.0 305 41.3
MSTRG.26199 Avicennia marina HOM05D001562 ORTHO05D001437 2.5e-27 127.1 298 45.6
Psat3g084560 Pisum sativum HOM05D001562 ORTHO05D001437 3.2e-27 126.7 307 42.0
FAN26G1485 Fragaria x ananassa HOM05D001562 ORTHO05D001437 9.4e-27 125.2 278 45.7
Ca_03432_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 6.1e-26 122.5 284 43.3
FAN19G2359 Fragaria x ananassa HOM05D001562 ORTHO05D001437 6.1e-26 122.5 278 45.3
FvH4_1g29400 Fragaria vesca HOM05D001562 ORTHO05D001437 8.0e-26 122.1 278 45.3
TWI34G0920 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 1.0e-25 121.7 298 40.6
EL10Ac5g11646 Beta vulgaris HOM05D001562 ORTHO05D001437 1.1e-24 118.2 324 40.4
Haze_20368 Corylus avellana HOM05D001562 ORTHO05D001437 4.4e-24 116.3 255 46.3
ClCG10G016720 Citrullus lanatus HOM05D001562 ORTHO05D001437 9.7e-24 115.2 366 38.0
Glyma.19G121100 Glycine max HOM05D001562 ORTHO05D001437 2.2e-23 114.0 238 44.5
CSS0049266 Camellia sinensis var. sinensis HOM05D013713 ORTHO05D000001 4.8e-23 112.8 278 44.6
Migut.K00188 Erythranthe guttata HOM05D001562 ORTHO05D001437 8.2e-23 112.1 293 43.3
Medtr7g087450 Medicago truncatula HOM05D001562 ORTHO05D001437 1.4e-22 111.3 308 39.9
TWI32G0837 Tripterygium wilfordii HOM05D001562 ORTHO05D001437 1.4e-22 111.3 279 41.2
DCAR_013503 Daucus carota HOM05D001562 ORTHO05D001437 1.8e-22 110.9 249 46.6
FAN23G1244 Fragaria x ananassa HOM05D001562 ORTHO05D001437 3.1e-22 110.2 292 43.2
TPR.G20663 Trifolium pratense HOM05D001562 ORTHO05D001437 1.2e-21 108.2 283 39.9
HanXRQChr10g0298571 Helianthus annuus HOM05D001562 ORTHO05D001437 1.6e-21 107.8 301 40.5
Nn2g14206 Nelumbo nucifera HOM05D001562 ORTHO05D001437 2.0e-21 107.5 299 39.1
CAN.G1156.19 Capsicum annuum HOM05D001562 ORTHO05D001437 5.9e-21 105.9 186 52.2
Sed0017141 Sechium edule HOM05D001562 ORTHO05D001437 1.7e-20 104.4 302 39.7
Lj1g0001304 Lotus japonicus HOM05D001562 ORTHO05D001437 5.0e-20 102.8 277 40.4
ECA247G2619 Erigeron canadensis HOM05D001562 ORTHO05D001437 2.5e-19 100.5 293 38.9
Aqoxy1G00005 Aquilegia oxysepala HOM05D001562 ORTHO05D001437 1.2e-18 98.2 307 39.7
Sed0010319 Sechium edule HOM05D001562 ORTHO05D001437 1.6e-18 97.8 341 38.4
Sc01g0005840 Simmondsia chinensis HOM05D001562 ORTHO05D001437 5.2e-17 92.8 323 38.4
Cpa.g.sc73.47 Carica papaya HOM05D001562 ORTHO05D001437 1.5e-16 91.3 154 54.5
Hund15148 Selenicereus undatus HOM05D001562 ORTHO05D001437 5.7e-16 89.4 331 39.9
Os11g0130100 Oryza sativa ssp. japonica HOM05D001562 ORTHO05D001437 1.7e-15 87.8 306 29.4
RhsimUnG0023000 Rhododendron simsii HOM05D001562 ORTHO05D001437 8.2e-15 85.5 328 39.0
HPP92_007505 Vanilla planifolia HOM05D001562 ORTHO05D001437 8.2e-15 85.5 299 34.1
CiPaw.10G044900 Carya illinoinensis HOM05D001562 ORTHO05D001437 1.6e-13 81.3 221 43.4
Zm00001eb163630 Zea mays HOM05D001562 ORTHO05D001437 1.6e-13 81.3 308 30.5
PSO339G4702 Papaver somniferum HOM05D001562 ORTHO05D001437 7.7e-13 79.0 295 38.3
Zm00001eb405350 Zea mays HOM05D001562 ORTHO05D001437 7.7e-13 79.0 298 29.2
MBI19_g15084_MAGBIO Magnolia biondii HOM05D001562 ORTHO05D001437 1.0e-12 78.6 324 36.7
CDE09G0429 Ceratophyllum demersum HOM05D001562 ORTHO05D001437 3.8e-12 76.6 233 39.1
PSO384G0282 Papaver somniferum HOM05D001562 ORTHO05D001437 5.0e-12 76.3 294 38.1
FAN28G2700 Fragaria x ananassa HOM05D001562 ORTHO05D001437 7.2e-11 72.4 140 44.3
Os12g0126800 Oryza sativa ssp. japonica HOM05D001562 ORTHO05D001437 9.4e-11 72.0 306 28.4
Nn3g16361 Nelumbo nucifera HOM05D000139 ORTHO05D001437 1.6e-10 71.2 310 31.3
Nn1g05263 Nelumbo nucifera HOM05D001562 ORTHO05D001437 2.1e-10 70.9 282 28.7
MELO3C008138.2 Cucumis melo HOM05D001562 ORTHO05D001437 3.6e-10 70.1 184 31.0
Lsat_1_v5_gn_9_32321 Lactuca sativa HOM05D002043 ORTHO05D002207 3.6e-10 70.1 295 38.6
Oeu036469.1 Olea europaea HOM05D001562 ORTHO05D001437 3.6e-10 70.1 250 39.6
CsaV3_2G033670 Cucumis sativus L. HOM05D001562 ORTHO05D001437 4.7e-10 69.7 192 32.3
GSVIVG01029899001 Vitis vinifera HOM05D001562 ORTHO05D001437 4.7e-10 69.7 72 52.8
GSVIVG01008592001 Vitis vinifera HOM05D001562 ORTHO05D001437 6.1e-10 69.3 336 27.4
Ciclev10014885m.g Citrus clementina HOM05D001562 ORTHO05D001437 1.4e-09 68.2 212 31.1
Hund13650 Selenicereus undatus HOM05D001562 ORTHO05D001437 1.4e-09 68.2 284 28.9
TAR376G0632 Trochodendron aralioides HOM05D001562 ORTHO05D001437 1.4e-09 68.2 311 28.9
CDE05G0798 Ceratophyllum demersum HOM05D001562 ORTHO05D001437 1.8e-09 67.8 298 29.2
ClCG11G007920 Citrullus lanatus HOM05D001562 ORTHO05D001437 1.8e-09 67.8 184 31.0
AUR62037076 Chenopodium quinoa HOM05D001562 ORTHO05D001437 2.3e-09 67.4 163 36.2
CARHR148140 Cardamine hirsuta HOM05D001562 ORTHO05D001437 8.8e-09 65.5 185 31.4
Cfa020604 Carpinus fangiana HOM05D001562 ORTHO05D001437 8.8e-09 65.5 184 28.8
MD01G1022500 Malus domestica HOM05D001562 ORTHO05D001437 8.8e-09 65.5 308 29.9
CANSAT01G2571 Cannabis sativa HOM05D001562 ORTHO05D001437 1.2e-08 65.1 282 27.0
Ca_16550_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 1.2e-08 65.1 113 35.4
Atru.chr4.289 Acer truncatum HOM05D001562 ORTHO05D001437 2.6e-08 63.9 117 37.6
ATR0307G013 Amborella trichopoda HOM05D001562 ORTHO05D001437 2.6e-08 63.9 114 36.0
Aqoxy6G00533 Aquilegia oxysepala HOM05D001562 ORTHO05D001437 2.6e-08 63.9 303 26.1
Mapoly0152s0004 Marchantia polymorpha HOM05D001562 ORTHO05D001437 2.6e-08 63.9 68 48.5
Dinv03876 Davidia involucrata HOM05D001562 ORTHO05D001437 3.4e-08 63.5 307 27.4
Sc07g0000590 Simmondsia chinensis HOM05D001562 ORTHO05D001437 4.4e-08 63.2 72 41.7
C07p36070 Brassica napus HOM05D001562 ORTHO05D001437 5.7e-08 62.8 188 31.4
Lj4g0012671 Lotus japonicus HOM05D001562 ORTHO05D001437 5.7e-08 62.8 297 26.9
PGR004G1859 Punica granatum HOM05D001562 ORTHO05D001437 5.7e-08 62.8 306 28.8
EL10Ac6g15061 Beta vulgaris HOM05D001562 ORTHO05D001437 7.5e-08 62.4 112 37.5
ATR0564G153 Amborella trichopoda HOM05D001562 ORTHO05D001437 1.3e-07 61.6 106 39.6
Cpa.g.sc2038.1 Carica papaya HOM05D001562 ORTHO05D001437 1.3e-07 61.6 74 40.5
FAN23G3062 Fragaria x ananassa HOM05D001562 ORTHO05D001437 1.3e-07 61.6 323 27.9
Ciclev10027075m.g Citrus clementina HOM05D001562 ORTHO05D001437 1.7e-07 61.2 285 26.7
FvH4_1g21760 Fragaria vesca HOM05D001562 ORTHO05D001437 1.7e-07 61.2 323 27.9
Glyma.11G237400 Glycine max HOM05D001562 ORTHO05D001437 1.7e-07 61.2 104 39.4
Peaxi162Scf00204g00622 Petunia axillaris HOM05D001562 ORTHO05D001437 1.7e-07 61.2 302 28.5
Psat5g088560 Pisum sativum HOM05D001562 ORTHO05D001437 1.7e-07 61.2 123 34.1
Ca_07321_v3 Cicer arietinum L. HOM05D001562 ORTHO05D001437 2.2e-07 60.8 184 29.3
Medtr3g087840 Medicago truncatula HOM05D001562 ORTHO05D001437 2.2e-07 60.8 116 35.3
Zm00001eb093540 Zea mays HOM05D001562 ORTHO05D001437 2.2e-07 60.8 302 28.1
Aa31LG2G5620 Aethionema arabicum HOM05D001562 ORTHO05D001437 2.8e-07 60.5 190 33.7
CiPaw.03G137700 Carya illinoinensis HOM05D001562 ORTHO05D001437 2.8e-07 60.5 196 30.1
QL06p050588 Quercus lobata HOM05D001562 ORTHO05D001437 2.8e-07 60.5 187 28.3
BolC7t44121H Brassica oleracea HOM05D001562 ORTHO05D001437 3.7e-07 60.1 188 30.9
FAN26G3173 Fragaria x ananassa HOM05D001562 ORTHO05D001437 3.7e-07 60.1 323 27.6
Ah.02g122890 Amaranthus hybridus HOM05D001562 ORTHO05D001437 4.8e-07 59.7 86 40.7
AUR62002043 Chenopodium quinoa HOM05D001562 ORTHO05D001437 4.8e-07 59.7 288 27.4
HanXRQChr05g0152251 Helianthus annuus HOM05D001562 ORTHO05D001437 4.8e-07 59.7 102 37.3
Prupe.6G178300 Prunus persica HOM05D001562 ORTHO05D001437 4.8e-07 59.7 315 27.6
A06p41590 Brassica napus HOM05D001562 ORTHO05D001437 6.3e-07 59.3 201 32.8
BraA06t27084Z Brassica rapa HOM05D001562 ORTHO05D001437 6.3e-07 59.3 201 32.8
Lj7A613T63 Lonicera japonica HOM05D001562 ORTHO05D001437 6.3e-07 59.3 179 32.4
Sp2g16090 Schrenkiella parvula HOM05D001562 ORTHO05D001437 6.3e-07 59.3 188 30.3
BcaC06g33872 Brassica carinata HOM05D001562 ORTHO05D001437 8.3e-07 58.9 187 33.2
CDE08G0256 Ceratophyllum demersum HOM05D001562 ORTHO05D001437 8.3e-07 58.9 261 31.8
Thhalv10004010m.g Eutrema salsugineum HOM05D001562 ORTHO05D001437 8.3e-07 58.9 188 31.4
Gorai.N023300 Gossypium raimondii HOM05D001562 ORTHO05D001437 8.3e-07 58.9 74 37.8
BcaB04g19419 Brassica carinata HOM05D001562 ORTHO05D001437 1.1e-06 58.5 194 33.5
Glyma.08G139600 Glycine max HOM05D001562 ORTHO05D001437 1.1e-06 58.5 299 28.1
MD15G1330000 Malus domestica HOM05D001562 ORTHO05D001437 1.1e-06 58.5 303 26.7
Oeu009504.2 Olea europaea HOM05D001562 ORTHO05D001437 1.1e-06 58.5 49 65.3
PSO675G4733 Papaver somniferum HOM05D001562 ORTHO05D001437 1.1e-06 58.5 283 26.9
Thecc.01G108700 Theobroma cacao HOM05D001562 ORTHO05D001437 1.1e-06 58.5 74 37.8
Aqoxy5G03246 Aquilegia oxysepala HOM05D001562 ORTHO05D001437 1.4e-06 58.2 298 32.6
Prupe.3G309500 Prunus persica HOM05D001562 ORTHO05D001437 1.4e-06 58.2 194 30.4
SGA_v2.0_scaffold66G22342 Striga asiatica HOM05D001562 ORTHO05D001437 1.4e-06 58.2 67 49.3
AT3G26990 Arabidopsis thaliana HOM05D001562 ORTHO05D001437 1.8e-06 57.8 185 29.2
A09p03200 Brassica napus HOM05D001562 ORTHO05D001437 1.8e-06 57.8 97 42.3
Dinv33312 Davidia involucrata HOM05D001562 ORTHO05D001437 1.8e-06 57.8 287 26.8
Gohir.D11G225400 Gossypium hirsutum HOM05D001562 ORTHO05D001437 1.8e-06 57.8 74 37.8
SGA_v2.0_scaffold47G17743 Striga asiatica HOM05D001562 ORTHO05D001437 1.8e-06 57.8 64 40.6
vmacro18363 Vaccinium macrocarpon HOM05D001562 ORTHO05D001437 1.8e-06 57.8 284 28.9
BcaC06g31031 Brassica carinata HOM05D001562 ORTHO05D001437 2.4e-06 57.4 192 32.3
FAN05G2767 Fragaria x ananassa HOM05D001562 ORTHO05D001437 2.4e-06 57.4 211 28.9
FAN09G2281 Fragaria x ananassa HOM05D001562 ORTHO05D001437 2.4e-06 57.4 211 28.9
Lalb_Chr08g0231241 Lupinus albus HOM05D001562 ORTHO05D001437 2.4e-06 57.4 62 43.5
Phvul.002G262900 Phaseolus vulgaris HOM05D001562 ORTHO05D001437 3.1e-06 57.0 297 27.6
BraA09t35958Z Brassica rapa HOM05D001562 ORTHO05D001437 4.1e-06 56.6 97 42.3
Dinv21958 Davidia involucrata HOM05D001562 ORTHO05D001437 4.1e-06 56.6 313 27.2
FvH4_6g53890 Fragaria vesca HOM05D001562 ORTHO05D001437 4.1e-06 56.6 211 28.4
FAN14G5051 Fragaria x ananassa HOM05D000173 ORTHO05D001437 4.1e-06 56.6 211 28.4
Manes.11G083900 Manihot esculenta HOM05D001562 ORTHO05D001437 4.1e-06 56.6 296 27.0
Sed0004313 Sechium edule HOM05D001562 ORTHO05D001437 4.1e-06 56.6 301 27.6
Sed0017119 Sechium edule HOM05D001562 ORTHO05D001437 4.1e-06 56.6 292 27.4
TPR.G21056 Trifolium pratense HOM05D001562 ORTHO05D001437 4.1e-06 56.6 127 30.7
HPP92_002336 Vanilla planifolia HOM05D001562 ORTHO05D001437 4.1e-06 56.6 288 25.7
AL5G15990 Arabidopsis lyrata HOM05D001562 ORTHO05D001437 5.4e-06 56.2 185 28.6
Migut.L00094 Erythranthe guttata HOM05D001562 ORTHO05D001437 5.4e-06 56.2 75 37.3
GSVIVG01022192001 Vitis vinifera HOM05D001562 ORTHO05D001437 5.4e-06 56.2 193 29.0
Duzib187G0029 Durio zibethinus HOM05D001562 ORTHO05D001437 7.0e-06 55.8 74 37.8
FAN02G2911 Fragaria x ananassa HOM05D001562 ORTHO05D001437 7.0e-06 55.8 211 28.4
FAN05G5179 Fragaria x ananassa HOM05D001562 ORTHO05D001437 7.0e-06 55.8 211 28.4
Lj2A557T54 Lonicera japonica HOM05D001562 ORTHO05D001437 7.0e-06 55.8 216 26.9
MSTRG.3799 Avicennia marina HOM05D001562 ORTHO05D001437 9.1e-06 55.5 64 37.5
MELO3C017576.2 Cucumis melo HOM05D001562 ORTHO05D001437 9.1e-06 55.5 118 33.9
TAR629G0916 Trochodendron aralioides HOM05D001562 ORTHO05D001437 9.1e-06 55.5 316 27.5


User provided reference genes

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