Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc00_g08470 Coffea canephora HOM05D004594 ORTHO05D005225 0.0e+00 2581.2 1421 100.0
Dinv02961 Davidia involucrata HOM05D004594 ORTHO05D005225 0.0e+00 1151.3 1481 52.1
Sopen04g003850 Solanum pennellii HOM05D004594 ORTHO05D005225 5.1e-303 1045.0 1459 49.8
Actinidia11790 Actinidia chinensis HOM05D004594 ORTHO05D005225 2.6e-299 1032.7 1539 48.7
Nitab4.5_0000129g0280 Nicotiana tabacum HOM05D004594 ORTHO05D005225 1.3e-285 987.3 1463 49.2
CAN.G194.5 Capsicum annuum HOM05D004594 ORTHO05D005225 1.0e-282 977.6 1431 49.3
Duzib248G1210 Durio zibethinus HOM05D004594 ORTHO05D005225 6.5e-282 974.9 1462 47.3
Cfa008959 Carpinus fangiana HOM05D004594 ORTHO05D005225 4.6e-280 968.8 1479 47.0
Manes.05G104800 Manihot esculenta HOM05D004594 ORTHO05D005225 2.0e-278 963.4 1486 47.1
Solyc04g008680.4 Solanum lycopersicum HOM05D004594 ORTHO05D005225 2.6e-278 963.0 1317 50.5
Peaxi162Scf00329g00617 Petunia axillaris HOM05D004594 ORTHO05D005225 3.3e-278 962.6 1443 48.3
QL03p068116 Quercus lobata HOM05D004594 ORTHO05D005225 2.2e-277 959.9 1504 46.9
Thecc.02G342500 Theobroma cacao HOM05D004594 ORTHO05D005225 3.7e-277 959.1 1455 46.8
Ciclev10030522m.g Citrus clementina HOM05D004594 ORTHO05D005225 2.6e-275 953.0 1429 47.6
Haze_11988 Corylus avellana HOM05D004594 ORTHO05D005225 1.7e-274 950.3 1565 44.8
RcHm_v2.0_Chr4g0439441 Rosa chinensis HOM05D004594 ORTHO05D005225 4.2e-273 945.7 1485 46.9
Eucgr.G02485 Eucalyptus grandis HOM05D004594 ORTHO05D005225 9.4e-273 944.5 1502 47.5
FAN22G0563 Fragaria x ananassa HOM05D004594 ORTHO05D005225 1.8e-271 940.3 1467 45.7
Manes.01G034200 Manihot esculenta HOM05D004594 ORTHO05D005225 2.3e-271 939.9 1496 46.1
TWI79G0308 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 6.7e-271 938.3 1501 45.8
Migut.E00588 Erythranthe guttata HOM05D004594 ORTHO05D005225 1.1e-270 937.6 1509 47.1
GSVIVG01019950001 Vitis vinifera HOM05D004594 ORTHO05D005225 7.4e-270 934.9 1471 46.6
FAN07G2218 Fragaria x ananassa HOM05D004594 ORTHO05D005225 9.7e-270 934.5 1490 45.8
FvH4_4g31060 Fragaria vesca HOM05D004594 ORTHO05D005225 2.2e-269 933.3 1469 46.2
FAN17G1193 Fragaria x ananassa HOM05D004594 ORTHO05D005225 4.8e-269 932.2 1469 45.7
CiPaw.06G087400 Carya illinoinensis HOM05D004594 ORTHO05D005225 6.3e-269 931.8 1467 45.7
MD16G1069300 Malus domestica HOM05D004594 ORTHO05D005225 2.2e-266 923.3 1471 46.5
Nitab4.5_0001419g0070 Nicotiana tabacum HOM05D004594 ORTHO05D005225 2.9e-266 922.9 1475 47.5
Potri.010G166100 Populus trichocarpa HOM05D004594 ORTHO05D005225 3.8e-266 922.5 1512 44.7
DCAR_013185 Daucus carota HOM05D004594 ORTHO05D005225 1.0e-263 914.4 1503 46.8
Prupe.1G277900 Prunus persica HOM05D004594 ORTHO05D005225 3.0e-263 912.9 1485 46.5
FAN12G0764 Fragaria x ananassa HOM05D004594 ORTHO05D005225 6.7e-263 911.8 1505 45.0
TWI75G1472 Tripterygium wilfordii HOM05D004594 ORTHO05D005225 1.2e-262 911.0 1520 44.9
CANSAT64G0453 Cannabis sativa HOM05D004594 ORTHO05D005225 4.4e-262 909.1 1493 45.3
Rhsim09G0077000 Rhododendron simsii HOM05D004594 ORTHO05D005225 1.7e-261 907.1 1566 43.4
CsaV3_5G025180 Cucumis sativus L. HOM05D004594 ORTHO05D005225 2.4e-260 903.3 1510 45.9
EL10Ac3g06731 Beta vulgaris HOM05D004594 ORTHO05D005225 1.5e-257 894.0 1484 44.1
ClCG09G021930 Citrullus lanatus HOM05D004594 ORTHO05D005225 4.2e-257 892.5 1551 45.3
Sed0022637 Sechium edule HOM05D004594 ORTHO05D005225 1.2e-256 891.0 1483 46.3
MELO3C002967.2 Cucumis melo HOM05D004594 ORTHO05D005225 3.4e-254 882.9 1508 45.6
AUR62035898 Chenopodium quinoa HOM05D004594 ORTHO05D005225 1.3e-253 880.9 1457 43.0
CiPaw.05G132100 Carya illinoinensis HOM05D004594 ORTHO05D005225 6.3e-253 878.6 1382 45.7
Ca_04825_v3 Cicer arietinum L. HOM05D004594 ORTHO05D005225 8.5e-250 868.2 1528 44.8
Gorai.012G186600 Gossypium raimondii HOM05D004594 ORTHO05D005225 1.9e-249 867.1 1477 44.5
Gohir.D04G191200 Gossypium hirsutum HOM05D004594 ORTHO05D005225 3.2e-249 866.3 1479 45.0
TAR371G0293 Trochodendron aralioides HOM05D004594 ORTHO05D005225 7.2e-249 865.1 1481 44.6
Hund25219 Selenicereus undatus HOM05D004594 ORTHO05D005225 8.0e-248 861.7 1489 43.8
Nn1g04524 Nelumbo nucifera HOM05D004594 ORTHO05D005225 8.3e-245 851.7 1491 43.4
Phvul.003G045700 Phaseolus vulgaris HOM05D004594 ORTHO05D005225 2.7e-243 846.7 1538 42.8
VMungo1215G3128 Vigna mungo HOM05D004594 ORTHO05D005225 2.7e-243 846.7 1527 43.7
Sabra10G0126400 Salix brachista HOM05D004594 ORTHO05D005225 4.7e-240 835.9 1540 41.6
Glyma.02G109900 Glycine max HOM05D004594 ORTHO05D005225 1.5e-238 830.9 1517 42.4
Oeu044046.4 Olea europaea HOM05D004594 ORTHO05D005225 2.4e-236 823.5 1223 47.0
Psat2g116320 Pisum sativum HOM05D004594 ORTHO05D005225 3.2e-236 823.2 1530 42.2
Glyma.01G051400 Glycine max HOM05D004594 ORTHO05D005225 1.6e-235 820.8 1484 43.2
Lj2g0016635 Lotus japonicus HOM05D004594 ORTHO05D005225 7.3e-233 812.0 1503 42.7
TAR629G1990 Trochodendron aralioides HOM05D004594 ORTHO05D005225 2.8e-232 810.1 1272 46.4
SGA_v2.0_scaffold140G35452 Striga asiatica HOM05D004594 ORTHO05D005225 3.1e-231 806.6 1542 41.5
AUR62035342 Chenopodium quinoa HOM05D004594 ORTHO05D005225 1.5e-230 804.3 1429 43.0
arahy.Tifrunner.gnm1.ann1.8R27D6 Arachis hypogaea HOM05D004594 ORTHO05D005225 5.8e-230 802.4 1550 40.7
Lalb_Chr10g0098431 Lupinus albus HOM05D004594 ORTHO05D005225 8.3e-229 798.5 1578 40.0
ECA233G5935 Erigeron canadensis HOM05D004594 ORTHO05D005225 1.6e-227 794.3 1489 43.1
Aqoxy3G03454 Aquilegia oxysepala HOM05D004594 ORTHO05D005225 2.7e-227 793.5 1471 41.4
PGR119G1944 Punica granatum HOM05D004594 ORTHO05D005225 2.3e-223 780.4 1468 42.7
PSO013G0146 Papaver somniferum HOM05D004594 ORTHO05D005225 1.2e-222 778.1 1485 41.4
PSO832G1080 Papaver somniferum HOM05D004594 ORTHO05D005225 5.4e-220 769.2 1482 41.0
Lsat_1_v5_gn_3_33900 Lactuca sativa HOM05D004594 ORTHO05D005225 9.2e-220 768.5 1469 42.7
Sc11g0002090 Simmondsia chinensis HOM05D004594 ORTHO05D005225 9.2e-212 741.9 1255 43.6
THA.LOC104824075 Tarenaya hassleriana HOM05D004594 ORTHO05D005225 4.6e-211 739.6 1511 42.4
Carub.0005s0198 Capsella rubella HOM05D004594 ORTHO05D005225 5.1e-210 736.1 1510 40.6
CARHR145490 Cardamine hirsuta HOM05D004594 ORTHO05D005225 1.1e-209 734.9 1525 40.9
Ah.13g075020 Amaranthus hybridus HOM05D004594 ORTHO05D005225 2.5e-209 733.8 1486 40.4
ECA246G2651 Erigeron canadensis HOM05D004594 ORTHO05D005225 5.2e-207 726.1 1563 40.4
Atru.chr11.1750 Acer truncatum HOM05D004594 ORTHO05D005225 2.4e-204 717.2 773 58.5
Cpa.g.sc25.130 Carica papaya HOM05D004594 ORTHO05D005225 3.5e-203 713.4 1473 42.8
Lsat_1_v5_gn_8_32581 Lactuca sativa HOM05D004594 ORTHO05D005225 6.6e-202 709.1 1426 41.5
arahy.Tifrunner.gnm1.ann1.KB2NSX Arachis hypogaea HOM05D004594 ORTHO05D005225 1.1e-201 708.4 1708 37.2
TPR.G34709 Trifolium pratense HOM05D004594 ORTHO05D005225 1.9e-201 707.6 1498 40.9
Medtr5g042000 Medicago truncatula HOM05D004594 ORTHO05D005225 2.6e-198 697.2 1581 39.3
HanXRQChr08g0224741 Helianthus annuus HOM05D004594 ORTHO05D005225 1.1e-196 691.8 1422 41.1
Sp2g14100 Schrenkiella parvula HOM05D004594 ORTHO05D005225 4.0e-191 673.3 1528 39.8
AL5G12800 Arabidopsis lyrata HOM05D004594 ORTHO05D005225 6.9e-191 672.5 1525 39.3
C09p31000 Brassica napus HOM05D004594 ORTHO05D005225 1.5e-190 671.4 1493 39.8
AT2G03150 Arabidopsis thaliana HOM05D004594 ORTHO05D005225 2.0e-190 671.0 1531 39.4
BcaC04g21505 Brassica carinata HOM05D004594 ORTHO05D005225 8.4e-189 665.6 1494 39.8
BcaB07g30683 Brassica carinata HOM05D004594 ORTHO05D005225 5.1e-186 656.4 1491 39.7
A09p24110 Brassica napus HOM05D004594 ORTHO05D005225 1.9e-185 654.4 1471 38.5
BraA09t38011Z Brassica rapa HOM05D004594 ORTHO05D005225 1.9e-185 654.4 1471 38.5
HanXRQChr17g0540651 Helianthus annuus HOM05D004594 ORTHO05D005225 8.2e-184 649.0 1439 39.7
BolC9t55959H Brassica oleracea HOM05D004594 ORTHO05D005225 2.0e-182 644.4 1492 39.0
CDE07G1889 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.3e-181 641.7 1444 39.9
Thhalv10005550m.g Eutrema salsugineum HOM05D004594 ORTHO05D005225 3.7e-176 623.6 1522 37.7
Aa31LG2G7300 Aethionema arabicum HOM05D004594 ORTHO05D005225 6.9e-175 619.4 1341 40.3
ATR0564G229 Amborella trichopoda HOM05D004594 ORTHO05D005225 6.5e-173 612.8 1511 38.9
MBI06_g33529_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 2.0e-166 591.3 1097 41.0
HanXRQChr14g0429131 Helianthus annuus HOM05D004594 ORTHO05D005225 2.6e-161 574.3 1291 39.6
SHI24774 Sapria himalayana HOM05D004594 ORTHO05D005225 5.3e-151 540.0 1263 34.9
unitig_52.g17301 Utricularia gibba HOM05D004594 ORTHO05D005225 1.0e-146 525.8 824 47.2
HanXRQChr08g0225211 Helianthus annuus HOM05D004594 ORTHO05D005225 2.8e-144 517.7 1264 36.7
Zm00001eb384230 Zea mays HOM05D004594 ORTHO05D005225 1.0e-141 509.2 1527 35.0
CDE04G0114 Ceratophyllum demersum HOM05D004594 ORTHO05D005225 1.9e-140 505.0 1327 33.5
Gohir.A04G146601 Gossypium hirsutum HOM05D004594 ORTHO05D005225 3.0e-130 471.1 635 53.2
Zm00001eb277410 Zea mays HOM05D004594 ORTHO05D005225 1.6e-126 458.8 1503 34.3
HPP92_001998 Vanilla planifolia HOM05D004594 ORTHO05D005225 2.7e-126 458.0 1383 35.2
C02p51140 Brassica napus HOM05D004594 ORTHO05D005225 3.3e-116 424.5 1295 33.1
Gohir.1Z049516 Gossypium hirsutum HOM05D004594 ORTHO05D005225 1.6e-115 422.2 622 44.7
SEGI_16638 Sequoiadendron giganteum HOM05D004594 ORTHO05D005225 4.2e-87 327.8 1437 29.2
Pp3c12_12730 Physcomitrium patens HOM05D004594 ORTHO05D005225 4.8e-67 261.2 1329 25.4
vmacro10769 Vaccinium macrocarpon HOM05D004594 ORTHO05D005225 4.5e-65 254.6 809 32.8
SMO172G0003 Selaginella moellendorffii HOM05D004594 ORTHO05D005225 5.3e-58 231.1 936 25.9
CBR_g5747 Chara braunii HOM05D004594 ORTHO05D005225 6.9e-58 230.7 265 43.0
Pp3c4_10880 Physcomitrium patens HOM05D004594 ORTHO05D005225 7.9e-54 217.2 1313 25.5
Lj3E852T1 Lonicera japonica HOM05D004594 ORTHO05D005225 1.0e-53 216.9 257 48.6
Mapoly0102s0024 Marchantia polymorpha HOM05D004594 ORTHO05D005225 2.3e-53 215.7 1361 25.9
Atru.chr11.1748 Acer truncatum HOM05D004594 ORTHO05D005225 1.5e-52 213.0 405 40.0
AagrBONN_evm.TU.Sc2ySwM_340.1878 Anthoceros agrestis HOM05D004594 ORTHO05D005225 9.7e-52 210.3 1472 25.1
unitig_52.g17300 Utricularia gibba HOM05D004594 ORTHO05D005225 3.9e-45 188.3 439 38.0
Rhsim04G0150600 Rhododendron simsii HOM05D004594 ORTHO05D005225 3.9e-37 161.8 180 50.6
Oeu032954.1 Olea europaea HOM05D004594 ORTHO05D005225 6.3e-35 154.5 92 79.3
BcaC03g17185 Brassica carinata HOM05D004594 ORTHO05D005225 2.5e-31 142.5 317 39.7
Oeu034639.1 Olea europaea HOM05D004594 ORTHO05D005225 2.5e-31 142.5 306 40.5
Os06g0562700 Oryza sativa ssp. japonica HOM05D004594 ORTHO05D005225 3.7e-27 128.6 370 31.6
Lj3A852T53 Lonicera japonica HOM05D004594 ORTHO05D005225 4.1e-26 125.2 134 54.5
Lj3E852G2 Lonicera japonica HOM05D004594 ORTHO05D005225 4.5e-25 121.7 239 42.7
TPR.G11445 Trifolium pratense HOM05D004594 ORTHO05D005225 4.2e-23 115.2 63 88.9
Gohir.1Z049616 Gossypium hirsutum HOM05D004594 ORTHO05D005225 5.2e-21 108.2 277 34.7
Lsat_1_v5_gn_3_92661 Lactuca sativa HOM05D004594 ORTHO05D005225 5.7e-20 104.8 89 58.4
Actinidia04099 Actinidia chinensis HOM05D004594 ORTHO05D005225 1.1e-18 100.5 228 39.9
Lsat_1_v5_gn_4_108040 Lactuca sativa HOM05D004594 ORTHO05D005225 1.4e-18 100.1 64 70.3
CBR_g5749 Chara braunii HOM05D004594 ORTHO05D005225 4.5e-17 95.1 261 33.3
MBI02_g24139_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 8.6e-16 90.9 69 63.8
Cre06.g283634 Chlamydomonas reinhardtii HOM05D004594 ORTHO05D005225 9.5e-15 87.4 301 24.3
Lsat_1_v5_gn_1_53021 Lactuca sativa HOM05D004594 ORTHO05D005225 5.2e-13 81.6 59 62.7
SHI24778 Sapria himalayana HOM05D004594 ORTHO05D005225 1.2e-12 80.5 129 46.5
A02p33260 Brassica napus HOM05D004594 ORTHO05D005225 3.4e-12 79.0 50 68.0
A02p33250 Brassica napus HOM05D004594 ORTHO05D005225 9.8e-12 77.4 79 50.6
MBI05_g14664_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 9.2e-10 70.9 50 64.0
BolC2t11204H Brassica oleracea HOM05D004594 ORTHO05D005225 2.7e-09 69.3 468 27.1
Oeu052406.1 Olea europaea HOM05D004594 ORTHO05D005225 7.8e-09 67.8 102 48.0
Atru.chr11.1749 Acer truncatum HOM05D004594 ORTHO05D005225 4.3e-07 62.0 146 36.3
HPP92_001999 Vanilla planifolia HOM05D004594 ORTHO05D005225 4.3e-07 62.0 86 39.5
MBI02_g24140_MAGBIO Magnolia biondii HOM05D004594 ORTHO05D005225 5.6e-07 61.6 168 36.9
BraA02t08348Z Brassica rapa HOM05D004594 ORTHO05D005225 4.7e-06 58.5 41 65.9
HanXRQChr13g0398481 Helianthus annuus HOM05D000534 ORTHO05D000389 4.7e-06 58.5 32 84.4
BcaB07g33689 Brassica carinata HOM05D004594 ORTHO05D021612 8.0e-06 57.8 69 43.5


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