Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s2055 Capsella rubella HOM05D000142 ORTHO05D114211 1.3e-39 166.4 114 100.0
Carub.0001s2355 Capsella rubella HOM05D000142 ORTHO05D000124 6.4e-15 84.3 106 76.4
Carub.0002s0510 Capsella rubella HOM05D000142 ORTHO05D000124 6.4e-15 84.3 106 76.4
Carub.0005s0487 Capsella rubella HOM05D000142 ORTHO05D000124 1.8e-09 66.2 106 70.8
Gohir.A12G029000 Gossypium hirsutum HOM05D000142 ORTHO05D000124 3.8e-07 58.5 61 57.4
Carub.0004s0071 Capsella rubella HOM05D000142 ORTHO05D000124 8.4e-07 57.4 45 68.9
Sopen10g023080 Solanum pennellii HOM05D000142 ORTHO05D000124 1.4e-06 56.6 46 65.2
vmacro02100 Vaccinium macrocarpon HOM05D000142 ORTHO05D000124 1.4e-06 56.6 58 56.9
Peaxi162Scf00003g01226 Petunia axillaris HOM05D000142 ORTHO05D000124 1.9e-06 56.2 32 84.4
Sp4g00820 Schrenkiella parvula HOM05D000142 ORTHO05D000124 1.9e-06 56.2 48 66.7
BcaB06g27780 Brassica carinata HOM05D000142 ORTHO05D000124 2.4e-06 55.8 63 54.0
unitig_60.g25446 Utricularia gibba HOM05D000142 ORTHO05D000124 2.4e-06 55.8 45 66.7
Actinidia00528 Actinidia chinensis HOM05D000142 ORTHO05D000124 3.2e-06 55.5 60 53.3
Actinidia27893 Actinidia chinensis HOM05D000142 ORTHO05D000124 3.2e-06 55.5 47 61.7
Actinidia17815 Actinidia chinensis HOM05D000142 ORTHO05D000124 4.2e-06 55.1 60 53.3
BcaB08g34998 Brassica carinata HOM05D000142 ORTHO05D000124 4.2e-06 55.1 48 64.6
DCAR_001576 Daucus carota HOM05D000142 ORTHO05D000124 4.2e-06 55.1 32 81.2
MSTRG.27697 Avicennia marina HOM05D000142 ORTHO05D000124 5.5e-06 54.7 58 55.2
CiPaw.13G023300 Carya illinoinensis HOM05D000142 ORTHO05D000124 5.5e-06 54.7 47 59.6
Migut.N01242 Erythranthe guttata HOM05D000142 ORTHO05D000124 5.5e-06 54.7 45 64.4
Rhsim05G0074000 Rhododendron simsii HOM05D000142 ORTHO05D000124 5.5e-06 54.7 45 64.4
SalBow3G4446 Salvia bowleyana HOM05D000142 ORTHO05D000124 5.5e-06 54.7 45 64.4
unitig_699.g19877 Utricularia gibba HOM05D000142 ORTHO05D000124 5.5e-06 54.7 45 64.4
AL4G10860 Arabidopsis lyrata HOM05D000142 ORTHO05D000124 7.1e-06 54.3 32 81.2
BcaC06g36135 Brassica carinata HOM05D000142 ORTHO05D000124 7.1e-06 54.3 48 62.5
A09p58040 Brassica napus HOM05D000142 ORTHO05D000124 7.1e-06 54.3 45 64.4
BraA09t41192Z Brassica rapa HOM05D000142 ORTHO05D000124 7.1e-06 54.3 45 64.4
Thhalv10000386m.g Eutrema salsugineum HOM05D000142 ORTHO05D000124 7.1e-06 54.3 32 81.2
Solyc10g051377.1 Solanum lycopersicum HOM05D000142 ORTHO05D000124 7.1e-06 54.3 32 81.2
THA.LOC104819608 Tarenaya hassleriana HOM05D000142 ORTHO05D000124 7.1e-06 54.3 50 64.0
Aqoxy5G01626 Aquilegia oxysepala HOM05D000142 ORTHO05D000124 9.3e-06 53.9 59 55.9
BcaC02g08775 Brassica carinata HOM05D000142 ORTHO05D000124 9.3e-06 53.9 60 51.7
BraA04t17270Z Brassica rapa HOM05D000142 ORTHO05D000124 9.3e-06 53.9 60 51.7
Duzib132G1167 Durio zibethinus HOM05D000142 ORTHO05D000124 9.3e-06 53.9 112 54.5
Sp3g29450 Schrenkiella parvula HOM05D000142 ORTHO05D000124 9.3e-06 53.9 48 62.5
THA.LOC104824824 Tarenaya hassleriana HOM05D000142 ORTHO05D000124 9.3e-06 53.9 45 64.4


User provided reference genes

Program Settings