Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 6.9e-61 238.0 167 100.0
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 2.0e-44 183.3 168 81.5
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 5.5e-42 175.3 107 87.9
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 5.5e-42 175.3 127 81.9
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 6.7e-40 168.3 170 73.5
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 9.7e-39 164.5 170 75.9
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 2.2e-38 163.3 170 75.9
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 1.1e-34 151.0 111 77.5
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 3.6e-33 146.0 110 73.6
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 3.6e-33 146.0 110 73.6
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 3.6e-33 146.0 110 73.6
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 7.9e-33 144.8 168 69.6
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 6.7e-32 141.7 168 69.6
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 1.7e-30 137.1 115 67.0
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 6.3e-30 135.2 115 66.1
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 6.3e-30 135.2 108 71.3
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 1.1e-29 134.4 107 72.0
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 1.4e-29 134.0 116 65.5
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 2.4e-29 133.3 168 68.5
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 3.1e-29 132.9 108 73.1
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 3.1e-29 132.9 118 66.9
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 3.1e-29 132.9 112 67.0
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 3.1e-29 132.9 113 65.5
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 3.1e-29 132.9 118 66.9
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 7.0e-29 131.7 107 71.0
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 7.0e-29 131.7 118 66.9
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 9.1e-29 131.3 106 69.8
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 2.0e-28 130.2 111 66.7
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 1.0e-27 127.9 102 70.6
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 1.3e-27 127.5 112 64.3
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 1.7e-27 127.1 114 64.0
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 1.7e-27 127.1 112 64.3
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 2.2e-27 126.7 116 66.4
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 2.9e-27 126.3 113 69.0
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.8e-27 125.9 112 63.4
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 6.5e-27 125.2 113 59.3
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 1.5e-26 124.0 103 68.0
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 2.5e-26 123.2 112 67.9
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 5.5e-26 122.1 113 60.2
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 5.5e-26 122.1 118 59.3
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 5.5e-26 122.1 112 68.8
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 5.5e-26 122.1 114 68.4
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 9.4e-26 121.3 112 59.8
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 1.2e-25 120.9 111 61.3
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.6e-25 120.6 114 58.8
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 2.7e-25 119.8 113 62.8
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 2.7e-25 119.8 112 60.7
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 2.7e-25 119.8 111 63.1
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 4.7e-25 119.0 62 95.2
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 4.7e-25 119.0 62 95.2
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 4.7e-25 119.0 111 68.5
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 4.7e-25 119.0 174 60.9
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 4.7e-25 119.0 70 87.1
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 6.1e-25 118.6 107 63.6
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 6.1e-25 118.6 114 62.3
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 1.8e-24 117.1 63 90.5
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 1.8e-24 117.1 116 60.3
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 2.3e-24 116.7 113 59.3
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 3.0e-24 116.3 105 68.6
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 4.0e-24 115.9 106 63.2
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 5.2e-24 115.5 109 64.2
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 6.7e-24 115.2 66 89.4
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 1.5e-23 114.0 63 84.1
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 5.7e-23 112.1 106 65.1
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 7.5e-23 111.7 116 59.5
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 7.5e-23 111.7 119 56.3
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 9.7e-23 111.3 63 85.7
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 1.3e-22 110.9 78 70.5
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 1.3e-22 110.9 118 65.3
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 1.7e-22 110.5 74 77.0
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 1.7e-22 110.5 63 84.1
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 2.2e-22 110.2 70 77.1
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 6.3e-22 108.6 63 82.5
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 8.2e-22 108.2 107 59.8
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 8.2e-22 108.2 106 56.6
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 1.8e-21 107.1 106 64.2
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 2.4e-21 106.7 112 57.1
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 4.1e-21 105.9 104 60.6
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 4.1e-21 105.9 106 58.5
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 5.3e-21 105.5 98 62.2
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 7.0e-21 105.1 63 81.0
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 1.2e-20 104.4 96 62.5
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 1.2e-20 104.4 53 92.5
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 1.2e-20 104.4 65 78.5
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 3.5e-20 102.8 63 77.8
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 4.5e-20 102.4 55 87.3
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 1.7e-19 100.5 106 56.6
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 1.7e-19 100.5 114 50.9
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 1.5e-18 97.4 98 57.1
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 2.1e-17 93.6 66 69.7
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 1.2e-15 87.8 108 51.9
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 4.4e-15 85.9 113 47.8
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 5.7e-15 85.5 61 68.9
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 9.8e-15 84.7 110 50.0
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 2.1e-09 67.0 59 57.6


User provided reference genes

Program Settings