Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0008s1203 Capsella rubella HOM05D003818 ORTHO05D004541 2.0e-74 282.3 145 100.0
Sp7g01990 Schrenkiella parvula HOM05D003818 ORTHO05D004541 3.0e-73 278.5 145 97.9
Carub.0003s2626 Capsella rubella HOM05D003818 ORTHO05D004541 5.0e-73 277.7 145 97.9
AL8G26260 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.5e-72 276.2 145 96.6
AL3G42280 Arabidopsis lyrata HOM05D003818 ORTHO05D004541 1.9e-72 275.8 145 96.6
AT5G51940 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 5.6e-72 274.2 145 95.9
CARHR264880 Cardamine hirsuta HOM05D003818 ORTHO05D004541 9.5e-72 273.5 145 95.9
A04p12880 Brassica napus HOM05D003818 ORTHO05D004541 1.6e-71 272.7 145 94.5
C04p46580 Brassica napus HOM05D003818 ORTHO05D004541 2.1e-71 272.3 145 94.5
Thhalv10027983m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 2.8e-71 271.9 145 94.5
BcaB06g27416 Brassica carinata HOM05D003818 ORTHO05D004541 4.7e-71 271.2 145 94.5
BraA04t16951Z Brassica rapa HOM05D003818 ORTHO05D004541 1.1e-70 270.0 145 93.1
Aa31LG9G1570 Aethionema arabicum HOM05D003818 ORTHO05D004541 1.8e-70 269.2 145 93.8
BolC4t26244H Brassica oleracea HOM05D003818 ORTHO05D004541 3.1e-70 268.5 145 92.4
Sp2g17150 Schrenkiella parvula HOM05D003818 ORTHO05D004541 3.1e-70 268.5 145 94.5
BcaC04g23878 Brassica carinata HOM05D003818 ORTHO05D004541 1.2e-69 266.5 145 93.1
A09p03630 Brassica napus HOM05D003818 ORTHO05D004541 1.2e-69 266.5 145 93.1
C09p03860 Brassica napus HOM05D003818 ORTHO05D004541 1.2e-69 266.5 145 93.1
BolC9t53311H Brassica oleracea HOM05D003818 ORTHO05D004541 1.2e-69 266.5 145 93.1
BraA09t36001Z Brassica rapa HOM05D003818 ORTHO05D004541 1.2e-69 266.5 145 93.1
BcaB04g19460 Brassica carinata HOM05D003818 ORTHO05D004541 3.4e-69 265.0 145 92.4
AT2G04630 Arabidopsis thaliana HOM05D003818 ORTHO05D004541 5.8e-69 264.2 145 92.4
Thhalv10005087m.g Eutrema salsugineum HOM05D003818 ORTHO05D004541 8.3e-68 260.4 145 91.0
THA.LOC104818368 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 1.7e-65 252.7 145 87.6
Potri.012G136900 Populus trichocarpa HOM05D003818 ORTHO05D004541 2.1e-63 245.7 145 87.6
Manes.06G144400 Manihot esculenta HOM05D003818 ORTHO05D004541 4.0e-62 241.5 145 83.4
THA.LOC104819386 Tarenaya hassleriana HOM05D003818 ORTHO05D004541 6.8e-62 240.7 146 82.9
Potri.015G138800 Populus trichocarpa HOM05D003818 ORTHO05D004541 5.8e-61 237.7 145 83.4
Sabra15G0149800 Salix brachista HOM05D003818 ORTHO05D004541 7.5e-61 237.3 145 82.8
arahy.Tifrunner.gnm1.ann1.7N83Z4 Arachis hypogaea HOM05D003818 ORTHO05D004541 9.9e-61 236.9 143 82.5
arahy.Tifrunner.gnm1.ann1.Y3E72Q Arachis hypogaea HOM05D003818 ORTHO05D004541 9.9e-61 236.9 143 82.5
LjContig00564g0007738 Lotus japonicus HOM05D003818 ORTHO05D004541 1.3e-60 236.5 145 82.8
Glyma.20G155900 Glycine max HOM05D003818 ORTHO05D004541 2.2e-60 235.7 145 83.4
Manes.14G028600 Manihot esculenta HOM05D003818 ORTHO05D004541 3.7e-60 235.0 145 82.1
Sabra12G0102700 Salix brachista HOM05D003818 ORTHO05D004541 3.7e-60 235.0 158 79.1
Glyma.10G238600 Glycine max HOM05D003818 ORTHO05D004541 8.3e-60 233.8 145 82.1
TWI23G0179 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 1.1e-59 233.4 145 82.1
Cpa.g.sc370.10 Carica papaya HOM05D003818 ORTHO05D004541 1.4e-59 233.0 145 81.4
MD12G1011200 Malus domestica HOM05D003818 ORTHO05D004541 2.4e-59 232.3 147 81.0
Lj2g0002682 Lotus japonicus HOM05D003818 ORTHO05D004541 3.2e-59 231.9 146 82.2
CsaV3_3G016860 Cucumis sativus L. HOM05D003818 ORTHO05D004541 4.1e-59 231.5 143 81.8
TWI39G1222 Tripterygium wilfordii HOM05D003818 ORTHO05D004541 4.1e-59 231.5 145 81.4
RcHm_v2.0_Chr6g0276321 Rosa chinensis HOM05D003818 ORTHO05D004541 5.4e-59 231.1 145 82.8
Sed0011620 Sechium edule HOM05D003818 ORTHO05D004541 5.4e-59 231.1 143 81.8
TPR.G3844 Trifolium pratense HOM05D003818 ORTHO05D004541 7.1e-59 230.7 145 80.0
FAN15G1651 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.2e-58 229.9 145 81.4
FAN27G0424 Fragaria x ananassa HOM05D003818 ORTHO05D004541 1.6e-58 229.6 145 81.4
VMungo0720G0599 Vigna mungo HOM05D003818 ORTHO05D004541 1.6e-58 229.6 145 82.8
FvH4_2g14180 Fragaria vesca HOM05D003818 ORTHO05D004541 2.1e-58 229.2 145 81.4
FAN24G1752 Fragaria x ananassa HOM05D003818 ORTHO05D004541 2.1e-58 229.2 145 81.4
Prupe.3G134400 Prunus persica HOM05D003818 ORTHO05D004541 2.1e-58 229.2 146 80.1
CiPaw.04G066900 Carya illinoinensis HOM05D003818 ORTHO05D004541 2.7e-58 228.8 145 82.8
Lalb_Chr21g0304961 Lupinus albus HOM05D003818 ORTHO05D004541 4.6e-58 228.0 145 77.9
Gohir.A11G009700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.0e-57 226.9 146 80.8
Medtr0019s0160 Medicago truncatula HOM05D003818 ORTHO05D004541 1.0e-57 226.9 146 80.1
Psat3g070640 Pisum sativum HOM05D003818 ORTHO05D004541 1.0e-57 226.9 147 78.9
Haze_13747 Corylus avellana HOM05D003818 ORTHO05D004541 1.3e-57 226.5 134 82.8
Phvul.007G066800 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 1.3e-57 226.5 145 80.0
VMungo0720G0479 Vigna mungo HOM05D001872 ORTHO05D001859 1.3e-57 226.5 141 80.1
MD17G1234800 Malus domestica HOM05D003818 ORTHO05D004541 1.7e-57 226.1 146 79.5
Nn3g21139 Nelumbo nucifera HOM05D003818 ORTHO05D004541 2.3e-57 225.7 147 79.6
Gohir.D11G009000 Gossypium hirsutum HOM05D003818 ORTHO05D004541 3.9e-57 224.9 146 80.1
Gorai.007G010600 Gossypium raimondii HOM05D003818 ORTHO05D004541 3.9e-57 224.9 146 80.1
Phvul.007G009900 Phaseolus vulgaris HOM05D003818 ORTHO05D004541 3.9e-57 224.9 142 80.3
Cfa020017 Carpinus fangiana HOM05D003818 ORTHO05D004541 5.1e-57 224.6 132 84.1
Duzib068G1062 Durio zibethinus HOM05D003818 ORTHO05D004541 5.1e-57 224.6 146 80.1
Medtr7g092450 Medicago truncatula HOM05D003818 ORTHO05D004541 5.1e-57 224.6 147 78.2
QL06p049138 Quercus lobata HOM05D003818 ORTHO05D004541 5.1e-57 224.6 144 81.2
Sed0012084 Sechium edule HOM05D003818 ORTHO05D004541 6.6e-57 224.2 143 79.7
Cfa008286 Carpinus fangiana HOM05D003818 ORTHO05D004541 1.1e-56 223.4 132 83.3
Eucgr.H00421 Eucalyptus grandis HOM05D003818 ORTHO05D004541 1.5e-56 223.0 145 80.7
GSVIVG01010613001 Vitis vinifera HOM05D003818 ORTHO05D004541 1.9e-56 222.6 145 79.3
TAR374G0305 Trochodendron aralioides HOM05D003818 ORTHO05D004541 4.3e-56 221.5 146 78.8
MELO3C006881.2 Cucumis melo HOM05D003818 ORTHO05D004541 5.6e-56 221.1 130 85.4
Atru.chr1.512 Acer truncatum HOM05D003818 ORTHO05D004541 7.3e-56 220.7 146 80.1
PGR102G2559 Punica granatum HOM05D003818 ORTHO05D004541 7.3e-56 220.7 146 79.5
ClCG05G016800 Citrullus lanatus HOM05D002695 ORTHO05D002964 1.2e-55 219.9 130 84.6
TAR375G1045 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.6e-55 219.5 144 81.2
GSVIVG01020800001 Vitis vinifera HOM05D003818 ORTHO05D004541 3.6e-55 218.4 145 80.7
HanXRQChr04g0108631 Helianthus annuus HOM05D003818 ORTHO05D004541 1.8e-54 216.1 147 77.6
Lalb_Chr06g0161031 Lupinus albus HOM05D003818 ORTHO05D004541 2.4e-54 215.7 145 75.9
Dinv28474 Davidia involucrata HOM05D003818 ORTHO05D004541 4.0e-54 214.9 147 78.2
Os03g0586600 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 6.8e-54 214.2 143 79.7
Migut.K00399 Erythranthe guttata HOM05D003818 ORTHO05D004541 8.9e-54 213.8 147 78.2
AUR62004298 Chenopodium quinoa HOM05D003818 ORTHO05D004541 1.2e-53 213.4 145 77.2
HanXRQChr16g0532841 Helianthus annuus HOM05D003818 ORTHO05D004541 2.0e-53 212.6 147 76.9
AUR62022747 Chenopodium quinoa HOM05D003818 ORTHO05D004541 2.6e-53 212.2 145 76.6
Zm00001eb219520 Zea mays HOM05D003818 ORTHO05D004541 2.6e-53 212.2 147 78.9
Atru.chr3.2134 Acer truncatum HOM05D003818 ORTHO05D004541 3.4e-53 211.8 145 77.2
ATR0757G129 Amborella trichopoda HOM05D003818 ORTHO05D004541 4.4e-53 211.5 148 76.4
Dinv35185 Davidia involucrata HOM05D003818 ORTHO05D004541 4.4e-53 211.5 147 78.2
EL10Ac1g00990 Beta vulgaris HOM05D003818 ORTHO05D004541 7.6e-53 210.7 145 75.2
Lsat_1_v5_gn_1_9221 Lactuca sativa HOM05D003818 ORTHO05D004541 9.9e-53 210.3 147 75.5
Hund27319 Selenicereus undatus HOM05D003818 ORTHO05D004541 9.9e-53 210.3 145 77.2
Thecc.03G171400 Theobroma cacao HOM05D003818 ORTHO05D004541 9.9e-53 210.3 145 75.2
MBI04_g00300_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 1.7e-52 209.5 147 77.6
MSTRG.27132 Avicennia marina HOM05D003818 ORTHO05D004541 1.4e-51 206.5 147 75.5
Duzib084G1211 Durio zibethinus HOM05D003818 ORTHO05D004541 1.9e-51 206.1 149 75.2
Hma1.2p1_0099F.1_g048510 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 2.4e-51 205.7 147 77.6
MBI07_g30196_MAGBIO Magnolia biondii HOM05D003818 ORTHO05D004541 2.4e-51 205.7 146 75.3
Os07g0463100 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D004541 2.4e-51 205.7 143 76.2
Haze_20202 Corylus avellana HOM05D003818 ORTHO05D004541 3.2e-51 205.3 123 80.5
Oeu061636.1 Olea europaea HOM05D003818 ORTHO05D004541 7.1e-51 204.1 146 75.3
Ciclev10006171m.g Citrus clementina HOM05D003818 ORTHO05D004541 1.2e-50 203.4 145 75.2
Solyc09g010500.3 Solanum lycopersicum HOM05D003818 ORTHO05D004541 1.2e-50 203.4 146 76.7
Sopen09g005230 Solanum pennellii HOM05D003818 ORTHO05D004541 1.2e-50 203.4 146 76.7
SGA_v2.0_scaffold59G20747 Striga asiatica HOM05D003818 ORTHO05D004541 1.2e-50 203.4 147 75.5
Actinidia31809 Actinidia chinensis HOM05D003818 ORTHO05D004541 2.1e-50 202.6 144 75.7
Rhsim05G0017100 Rhododendron simsii HOM05D003818 ORTHO05D004541 2.7e-50 202.2 147 74.8
CSS0048006 Camellia sinensis var. sinensis HOM05D003818 ORTHO05D004541 3.5e-50 201.8 136 80.1
Rhsim03G0177700 Rhododendron simsii HOM05D003818 ORTHO05D004541 3.5e-50 201.8 147 74.8
SEGI_10630 Sequoiadendron giganteum HOM05D003818 ORTHO05D004541 3.5e-50 201.8 149 75.2
ClCG05G007860 Citrullus lanatus HOM05D003818 ORTHO05D004541 6.0e-50 201.1 201 58.2
PGSC0003DMG400008922 Solanum tuberosum HOM05D003818 ORTHO05D004541 7.8e-50 200.7 146 75.3
COL.COLO4_14270 Corchorus olitorius HOM05D003818 ORTHO05D004541 1.3e-49 199.9 128 81.2
Gohir.D08G112900 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.3e-49 199.9 146 72.6
Gorai.004G121300 Gossypium raimondii HOM05D003818 ORTHO05D004541 1.3e-49 199.9 146 72.6
CsaV3_3G046320 Cucumis sativus L. HOM05D003818 ORTHO05D004541 1.7e-49 199.5 143 75.5
Cc02_g03330 Coffea canephora HOM05D003818 ORTHO05D004541 3.0e-49 198.7 146 73.3
Hma1.2p1_0270F.1_g108370 Hydrangea macrophylla HOM05D003818 ORTHO05D004541 3.0e-49 198.7 133 80.5
Gohir.A08G082700 Gossypium hirsutum HOM05D003818 ORTHO05D004541 1.9e-48 196.1 146 71.9
MSTRG.26327 Avicennia marina HOM05D003818 ORTHO05D004541 2.5e-48 195.7 148 73.0
Aqoxy7G00432 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 3.3e-48 195.3 145 73.1
ECA247G1139 Erigeron canadensis HOM05D003818 ORTHO05D004541 4.3e-48 194.9 144 73.6
PSO478G0785 Papaver somniferum HOM05D003818 ORTHO05D004541 5.6e-48 194.5 146 74.0
PSO675G1382 Papaver somniferum HOM05D003818 ORTHO05D004541 5.6e-48 194.5 146 74.0
PSO782G3144 Papaver somniferum HOM05D003818 ORTHO05D004541 5.6e-48 194.5 146 74.0
DCAR_018174 Daucus carota HOM05D003818 ORTHO05D004541 1.6e-47 193.0 148 72.3
Pp3c16_17050 Physcomitrium patens HOM05D003818 ORTHO05D004541 2.8e-47 192.2 148 69.6
PSO541G1664 Papaver somniferum HOM05D003818 ORTHO05D004541 4.7e-47 191.4 145 73.1
Nitab4.5_0017332g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.8e-46 189.5 151 69.5
SGA_v2.0_scaffold50G18457 Striga asiatica HOM05D003818 ORTHO05D004541 6.9e-46 187.6 183 61.2
CANSAT56G1911 Cannabis sativa HOM05D003818 ORTHO05D004541 2.6e-45 185.7 121 82.6
vmacro16312 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 4.4e-45 184.9 169 63.3
CDE06G2832 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 7.6e-45 184.1 145 69.0
unitig_0.g2487 Utricularia gibba HOM05D003818 ORTHO05D004541 8.4e-44 180.6 143 69.9
Lsat_1_v5_gn_3_64081 Lactuca sativa HOM05D003818 ORTHO05D004541 5.4e-43 177.9 145 69.7
CDE02G0031 Ceratophyllum demersum HOM05D003818 ORTHO05D004541 2.1e-42 176.0 145 68.3
Peaxi162Scf00039g01318 Petunia axillaris HOM05D003818 ORTHO05D004541 2.1e-42 176.0 145 69.0
DCAR_009510 Daucus carota HOM05D000059 ORTHO05D000128 2.7e-42 175.6 150 67.3
vmacro06714 Vaccinium macrocarpon HOM05D003818 ORTHO05D004541 2.7e-42 175.6 146 68.5
AagrBONN_evm.TU.Sc2ySwM_344.4289 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.0e-41 173.7 145 66.9
Oeu030115.1 Olea europaea HOM05D003818 ORTHO05D004541 1.0e-41 173.7 146 68.5
Mapoly0001s0266 Marchantia polymorpha HOM05D003818 ORTHO05D004541 2.3e-41 172.6 147 68.7
Sc23g0003230 Simmondsia chinensis HOM05D003818 ORTHO05D004541 1.1e-40 170.2 132 71.2
SMO200G0145 Selaginella moellendorffii HOM05D003818 ORTHO05D004541 1.9e-40 169.5 95 86.3
Gohir.D12G260866 Gossypium hirsutum HOM05D003818 ORTHO05D004541 4.3e-40 168.3 133 69.2
Aqoxy6G01685 Aquilegia oxysepala HOM05D003818 ORTHO05D004541 7.3e-40 167.5 137 71.5
Peaxi162Scf01172g00037 Petunia axillaris HOM05D003818 ORTHO05D004541 4.8e-39 164.9 141 67.4
Zm00001eb049200 Zea mays HOM05D003818 ORTHO05D004541 1.4e-38 163.3 123 76.4
TAR375G0179 Trochodendron aralioides HOM05D003818 ORTHO05D004541 3.1e-38 162.2 113 78.8
Nitab4.5_0006124g0010 Nicotiana tabacum HOM05D003818 ORTHO05D004541 6.9e-38 161.0 123 74.0
MD09G1242800 Malus domestica HOM05D003818 ORTHO05D004541 1.2e-37 160.2 91 84.6
SalBow5G5531 Salvia bowleyana HOM05D003818 ORTHO05D004541 1.2e-37 160.2 125 72.8
CBR_g31915 Chara braunii HOM05D003818 ORTHO05D004541 2.6e-37 159.1 144 63.2
Haze_09431 Corylus avellana HOM05D003818 ORTHO05D004541 2.2e-36 156.0 132 64.4
CAN.G97.6 Capsicum annuum HOM05D003818 ORTHO05D004541 6.4e-36 154.5 115 74.8
Oeu021768.1 Olea europaea HOM05D003818 ORTHO05D004541 5.1e-33 144.8 123 68.3
Prupe.7G013200 Prunus persica HOM05D003818 ORTHO05D004541 1.1e-32 143.7 99 79.8
VMungo0647G2358 Vigna mungo HOM05D003818 ORTHO05D004541 7.4e-32 141.0 104 76.0
arahy.Tifrunner.gnm1.ann1.36XVJD Arachis hypogaea HOM05D003818 ORTHO05D004541 1.3e-31 140.2 98 73.5
MCO13G124 Micromonas commoda HOM05D003818 ORTHO05D004541 1.1e-30 137.1 82 78.0
Cre01.g002200 Chlamydomonas reinhardtii HOM05D003818 ORTHO05D004541 1.8e-30 136.3 123 61.0
MELO3C003707.2 Cucumis melo HOM05D003818 ORTHO05D004541 2.0e-29 132.9 143 53.8
PRCOL_00007084 Prasinoderma coloniale HOM05D003818 ORTHO05D004541 1.7e-28 129.8 134 56.7
Oeu021769.1 Olea europaea HOM05D003818 ORTHO05D004541 7.9e-26 120.9 101 72.3
Nitab4.5_0002113g0140 Nicotiana tabacum HOM05D003818 ORTHO05D004541 1.8e-25 119.8 107 68.2
SalBow8G3306 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.3e-25 119.4 120 60.0
SalBow8G5018 Salvia bowleyana HOM05D003818 ORTHO05D004541 2.3e-25 119.4 120 60.0
Haze_26305 Corylus avellana HOM05D003818 ORTHO05D004541 5.1e-25 118.2 69 79.7
TAR374G0228 Trochodendron aralioides HOM05D003818 ORTHO05D004541 1.5e-24 116.7 64 85.9
arahy.Tifrunner.gnm1.ann1.TF2L72 Arachis hypogaea HOM05D003818 ORTHO05D004541 1.1e-22 110.5 82 69.5
arahy.Tifrunner.gnm1.ann1.99YBLU Arachis hypogaea HOM05D003818 ORTHO05D004541 1.4e-22 110.2 131 51.9
arahy.Tifrunner.gnm1.ann1.28837M Arachis hypogaea HOM05D003818 ORTHO05D004541 2.4e-22 109.4 136 50.0
Nitab4.5_0002077g0060 Nicotiana tabacum HOM05D003818 ORTHO05D004541 2.4e-22 109.4 145 49.7
arahy.Tifrunner.gnm1.ann1.FSRU1U Arachis hypogaea HOM05D003818 ORTHO05D004541 6.9e-22 107.8 76 72.4
arahy.Tifrunner.gnm1.ann1.VWKV4W Arachis hypogaea HOM05D003818 ORTHO05D004541 6.9e-22 107.8 77 71.4
PGR142G2678 Punica granatum HOM05D003818 ORTHO05D004541 8.4e-20 100.9 81 67.9
AagrBONN_evm.TU.Sc2ySwM_344.4292 Anthoceros agrestis HOM05D003818 ORTHO05D004541 1.4e-19 100.1 83 62.7
Actinidia03108 Actinidia chinensis HOM05D003818 ORTHO05D054983 8.7e-17 90.9 45 88.9
Os08g0426000 Oryza sativa ssp. japonica HOM05D003818 ORTHO05D295196 1.8e-14 83.2 76 64.5
arahy.Tifrunner.gnm1.ann1.VXTW3V Arachis hypogaea HOM05D003818 ORTHO05D013217 2.3e-09 66.2 35 94.3
AagrBONN_evm.TU.Sc2ySwM_362.1258 Anthoceros agrestis HOM05D003818 ORTHO05D004541 5.3e-06 55.1 98 43.9


User provided reference genes

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