Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s2128 Capsella rubella HOM05D004014 ORTHO05D018183 1.0e-111 406.8 205 100.0
AT3G21280 Arabidopsis thaliana HOM05D004014 ORTHO05D005890 4.0e-76 288.5 150 96.0
AL3G35320 Arabidopsis lyrata HOM05D004014 ORTHO05D005890 5.3e-76 288.1 150 96.0
Thhalv10020636m.g Eutrema salsugineum HOM05D004014 ORTHO05D005890 3.8e-74 282.0 150 94.0
Carub.0001s4058 Capsella rubella HOM05D004014 ORTHO05D005890 5.6e-70 268.1 162 82.1
AL1G59650 Arabidopsis lyrata HOM05D004014 ORTHO05D005890 9.6e-70 267.3 160 83.8
AT1G51710 Arabidopsis thaliana HOM05D004014 ORTHO05D005890 6.2e-69 264.6 160 82.5
BcaC01g01290 Brassica carinata HOM05D004014 ORTHO05D005890 3.1e-68 262.3 175 77.7
Sp3g19320 Schrenkiella parvula HOM05D004014 ORTHO05D005890 5.3e-68 261.5 147 90.5
A08p02550 Brassica napus HOM05D004014 ORTHO05D005890 6.9e-68 261.2 150 88.0
BraA08t32295Z Brassica rapa HOM05D004014 ORTHO05D005890 6.9e-68 261.2 150 88.0
C03p90260 Brassica napus HOM05D004014 ORTHO05D005890 2.0e-67 259.6 150 87.3
BolC3t21348H Brassica oleracea HOM05D004014 ORTHO05D005890 2.0e-67 259.6 150 87.3
CARHR041870 Cardamine hirsuta HOM05D004014 ORTHO05D005890 5.8e-67 258.1 161 82.0
C06p06860 Brassica napus HOM05D004014 ORTHO05D005890 4.9e-66 255.0 147 86.4
BolC6t35793H Brassica oleracea HOM05D004014 ORTHO05D005890 4.9e-66 255.0 147 86.4
THA.LOC104817933 Tarenaya hassleriana HOM05D004014 ORTHO05D005890 4.9e-66 255.0 162 77.8
Duzib160G0604 Durio zibethinus HOM05D004014 ORTHO05D005890 5.5e-65 251.5 160 78.8
THA.LOC104805917 Tarenaya hassleriana HOM05D004014 ORTHO05D005890 1.6e-64 250.0 150 84.0
COL.COLO4_30610 Corchorus olitorius HOM05D004014 ORTHO05D005890 3.5e-64 248.8 160 77.5
Thecc.06G108100 Theobroma cacao HOM05D004014 ORTHO05D005890 7.9e-64 247.7 160 77.5
QL05p015866 Quercus lobata HOM05D004014 ORTHO05D005890 1.0e-63 247.3 163 76.1
Atru.chr1.3637 Acer truncatum HOM05D004014 ORTHO05D005890 3.0e-63 245.7 148 83.8
Atru.chr8.1187 Acer truncatum HOM05D004014 ORTHO05D005890 3.0e-63 245.7 148 83.8
arahy.Tifrunner.gnm1.ann1.ZVXK34 Arachis hypogaea HOM05D004014 ORTHO05D005890 3.9e-63 245.4 163 74.8
Manes.04G137700 Manihot esculenta HOM05D004014 ORTHO05D005890 3.9e-63 245.4 151 81.5
QL05p015273 Quercus lobata HOM05D004014 ORTHO05D005890 3.9e-63 245.4 163 76.1
TAR626G0060 Trochodendron aralioides HOM05D004014 ORTHO05D005890 3.9e-63 245.4 163 76.1
CANSAT56G3696 Cannabis sativa HOM05D004014 ORTHO05D005890 5.1e-63 245.0 156 77.6
CiPaw.02G141900 Carya illinoinensis HOM05D004014 ORTHO05D005890 5.1e-63 245.0 150 80.0
Gorai.006G096100 Gossypium raimondii HOM05D004014 ORTHO05D005890 8.7e-63 244.2 162 74.1
Medtr8g015660 Medicago truncatula HOM05D004014 ORTHO05D005890 8.7e-63 244.2 163 75.5
Haze_15924 Corylus avellana HOM05D004014 ORTHO05D005890 1.1e-62 243.8 163 74.8
GSVIVG01016888001 Vitis vinifera HOM05D004014 ORTHO05D005890 1.1e-62 243.8 150 80.7
Lj5A49T39 Lonicera japonica HOM05D004014 ORTHO05D005890 1.5e-62 243.4 151 82.1
BcaB07g33627 Brassica carinata HOM05D004014 ORTHO05D005890 1.9e-62 243.0 129 90.7
BraA06t23436Z Brassica rapa HOM05D004014 ORTHO05D005890 1.9e-62 243.0 134 88.1
Ciclev10025482m.g Citrus clementina HOM05D004014 ORTHO05D005890 1.9e-62 243.0 152 78.3
BcaC08g43331 Brassica carinata HOM05D004014 ORTHO05D005890 2.5e-62 242.7 134 87.3
A06p02300 Brassica napus HOM05D004014 ORTHO05D005890 2.5e-62 242.7 134 87.3
CSS0027279 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D005890 2.5e-62 242.7 151 80.1
Eucgr.F03104 Eucalyptus grandis HOM05D004014 ORTHO05D005890 2.5e-62 242.7 164 74.4
MD17G1176500 Malus domestica HOM05D004014 ORTHO05D005890 2.5e-62 242.7 151 80.1
Gohir.A09G080500 Gossypium hirsutum HOM05D004014 ORTHO05D005890 3.3e-62 242.3 163 74.2
Lj3g0023335 Lotus japonicus HOM05D004014 ORTHO05D005890 4.3e-62 241.9 162 75.3
Hund00756 Selenicereus undatus HOM05D004014 ORTHO05D005890 5.7e-62 241.5 159 76.1
RcHm_v2.0_Chr2g0142531 Rosa chinensis HOM05D004014 ORTHO05D005890 7.4e-62 241.1 157 77.7
CSS0031715 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D005890 9.6e-62 240.7 151 80.1
DCAR_007611 Daucus carota HOM05D004014 ORTHO05D005890 9.6e-62 240.7 152 79.6
Psat4g193640 Pisum sativum HOM05D004014 ORTHO05D005890 9.6e-62 240.7 190 67.4
Thhalv10011383m.g Eutrema salsugineum HOM05D004014 ORTHO05D005890 1.3e-61 240.4 150 82.7
Manes.11G028700 Manihot esculenta HOM05D004014 ORTHO05D005890 1.3e-61 240.4 151 78.8
VMungo0331G1129 Vigna mungo HOM05D004014 ORTHO05D005890 1.3e-61 240.4 159 74.8
Actinidia39122 Actinidia chinensis HOM05D004014 ORTHO05D005890 1.6e-61 240.0 151 79.5
arahy.Tifrunner.gnm1.ann1.SBEJ10 Arachis hypogaea HOM05D004014 ORTHO05D005890 1.6e-61 240.0 163 74.2
vmacro16995 Vaccinium macrocarpon HOM05D004014 ORTHO05D005890 1.6e-61 240.0 151 78.8
Rhsim12G0204700 Rhododendron simsii HOM05D004014 ORTHO05D005890 2.1e-61 239.6 151 79.5
Duzib192G0196 Durio zibethinus HOM05D004014 ORTHO05D005890 2.8e-61 239.2 149 80.5
FAN05G5071 Fragaria x ananassa HOM05D004014 ORTHO05D005890 2.8e-61 239.2 151 79.5
FvH4_6g32980 Fragaria vesca HOM05D004014 ORTHO05D005890 3.7e-61 238.8 151 79.5
FAN02G0480 Fragaria x ananassa HOM05D004014 ORTHO05D005890 3.7e-61 238.8 151 79.5
FAN09G0688 Fragaria x ananassa HOM05D004014 ORTHO05D005890 3.7e-61 238.8 151 79.5
FAN14G2620 Fragaria x ananassa HOM05D004014 ORTHO05D005890 3.7e-61 238.8 151 79.5
Gohir.D09G080501 Gossypium hirsutum HOM05D004014 ORTHO05D005890 3.7e-61 238.8 163 73.6
MD09G1195900 Malus domestica HOM05D004014 ORTHO05D005890 3.7e-61 238.8 151 78.1
Ca_23300_v3 Cicer arietinum L. HOM05D004014 ORTHO05D005890 6.3e-61 238.0 151 78.8
Lsat_1_v5_gn_1_36421 Lactuca sativa HOM05D004014 ORTHO05D005890 6.3e-61 238.0 155 77.4
Sabra01G0156400 Salix brachista HOM05D004014 ORTHO05D005890 6.3e-61 238.0 152 76.3
PGR102G0116 Punica granatum HOM05D004014 ORTHO05D005890 1.1e-60 237.3 164 73.2
TPR.G24219 Trifolium pratense HOM05D004014 ORTHO05D005890 1.1e-60 237.3 151 78.1
Glyma.08G195900 Glycine max HOM05D004014 ORTHO05D005890 1.4e-60 236.9 150 77.3
Lalb_Chr04g0263081 Lupinus albus HOM05D004014 ORTHO05D005890 1.4e-60 236.9 163 73.0
DCAR_007610 Daucus carota HOM05D004014 ORTHO05D005890 2.4e-60 236.1 152 78.3
Prupe.3G052400 Prunus persica HOM05D004014 ORTHO05D005890 2.4e-60 236.1 151 76.8
Potri.003G033700 Populus trichocarpa HOM05D004014 ORTHO05D005890 3.1e-60 235.7 151 76.8
TWI79G1365 Tripterygium wilfordii HOM05D004014 ORTHO05D005890 3.1e-60 235.7 150 78.7
PSO832G1047 Papaver somniferum HOM05D004014 ORTHO05D005890 4.1e-60 235.3 162 71.6
Sc12g0009850 Simmondsia chinensis HOM05D004014 ORTHO05D005890 4.1e-60 235.3 163 73.0
ECA232G4630 Erigeron canadensis HOM05D004014 ORTHO05D005890 5.3e-60 235.0 151 76.8
SGA_v2.0_scaffold71G23744 Striga asiatica HOM05D004014 ORTHO05D005890 5.3e-60 235.0 151 78.1
Actinidia09020 Actinidia chinensis HOM05D004014 ORTHO05D005890 6.9e-60 234.6 163 72.4
Dinv37931 Davidia involucrata HOM05D004014 ORTHO05D005890 6.9e-60 234.6 155 76.8
Lalb_Chr25g0280531 Lupinus albus HOM05D004014 ORTHO05D005890 9.0e-60 234.2 163 71.8
AUR62041068 Chenopodium quinoa HOM05D004014 ORTHO05D005890 1.2e-59 233.8 151 78.1
Migut.I01003 Erythranthe guttata HOM05D004014 ORTHO05D005890 1.2e-59 233.8 151 76.8
Nn8g38926 Nelumbo nucifera HOM05D004014 ORTHO05D005890 1.2e-59 233.8 151 76.8
Nitab4.5_0003218g0070 Nicotiana tabacum HOM05D004014 ORTHO05D005890 2.0e-59 233.0 163 72.4
Sabra03G0029500 Salix brachista HOM05D004014 ORTHO05D005890 2.0e-59 233.0 157 73.9
Nitab4.5_0006642g0010 Nicotiana tabacum HOM05D004014 ORTHO05D005890 2.6e-59 232.6 163 72.4
Potri.001G197400 Populus trichocarpa HOM05D004014 ORTHO05D005890 2.6e-59 232.6 164 72.6
Glyma.07G012300 Glycine max HOM05D004014 ORTHO05D005890 3.4e-59 232.3 163 70.6
HanXRQChr09g0276341 Helianthus annuus HOM05D004014 ORTHO05D005890 3.4e-59 232.3 160 73.8
Aqoxy7G01294 Aquilegia oxysepala HOM05D004014 ORTHO05D005890 4.5e-59 231.9 151 76.8
AUR62037625 Chenopodium quinoa HOM05D004014 ORTHO05D005890 4.5e-59 231.9 151 77.5
PSO063G2767 Papaver somniferum HOM05D004014 ORTHO05D005890 4.5e-59 231.9 150 76.0
EL10Ac2g03344 Beta vulgaris HOM05D004014 ORTHO05D005890 5.9e-59 231.5 151 78.1
Phvul.010G141700 Phaseolus vulgaris HOM05D004014 ORTHO05D005890 1.0e-58 230.7 150 76.0
Solyc12g044740.2 Solanum lycopersicum HOM05D004014 ORTHO05D005890 1.7e-58 229.9 151 76.2
Sopen12g022890 Solanum pennellii HOM05D004014 ORTHO05D005890 1.7e-58 229.9 151 76.2
Oeu039979.1 Olea europaea HOM05D004014 ORTHO05D005890 3.8e-58 228.8 151 76.2
SalBow6G0444 Salvia bowleyana HOM05D004014 ORTHO05D005890 3.8e-58 228.8 150 76.0
CiPaw.01G227100 Carya illinoinensis HOM05D004014 ORTHO05D005890 6.5e-58 228.0 160 73.1
Lsat_1_v5_gn_4_95921 Lactuca sativa HOM05D004014 ORTHO05D005890 8.5e-58 227.6 152 73.7
HanXRQChr05g0140121 Helianthus annuus HOM05D004014 ORTHO05D005890 1.1e-57 227.3 151 74.2
ClCG09G000550 Citrullus lanatus HOM05D004014 ORTHO05D005890 1.4e-57 226.9 151 74.8
Cc04_g02170 Coffea canephora HOM05D004014 ORTHO05D005890 1.9e-57 226.5 150 74.7
CsaV3_7G034900 Cucumis sativus L. HOM05D004014 ORTHO05D005890 9.3e-57 224.2 151 73.5
Peaxi162Scf00177g00215 Petunia axillaris HOM05D004014 ORTHO05D005890 9.3e-57 224.2 148 75.0
MSTRG.22603 Avicennia marina HOM05D004014 ORTHO05D005890 1.2e-56 223.8 153 73.2
unitig_37.g12991 Utricularia gibba HOM05D004014 ORTHO05D005890 2.7e-56 222.6 151 74.2
CAN.G12.3 Capsicum annuum HOM05D004014 ORTHO05D005890 6.1e-56 221.5 151 73.5
Aa31LG8G7980 Aethionema arabicum HOM05D004014 ORTHO05D005890 1.3e-55 220.3 174 67.8
MELO3C024402.2 Cucumis melo HOM05D004014 ORTHO05D005890 1.3e-55 220.3 151 72.8
SGA_v2.0_scaffold45G16993 Striga asiatica HOM05D004014 ORTHO05D005890 1.8e-55 219.9 148 73.6
ATR0789G134 Amborella trichopoda HOM05D004014 ORTHO05D005890 1.9e-54 216.5 129 80.6
Sed0015232 Sechium edule HOM05D004014 ORTHO05D005890 2.5e-54 216.1 151 71.5
Sed0015765 Sechium edule HOM05D004014 ORTHO05D005890 3.3e-54 215.7 150 72.0
Os01g0550100 Oryza sativa ssp. japonica HOM05D004014 ORTHO05D005890 4.3e-54 215.3 153 69.9
Zm00001eb162410 Zea mays HOM05D004014 ORTHO05D005890 3.7e-53 212.2 153 69.3
CDE07G0617 Ceratophyllum demersum HOM05D004014 ORTHO05D005890 2.4e-52 209.5 151 68.9
MBI04_g06225_MAGBIO Magnolia biondii HOM05D004014 ORTHO05D005890 5.3e-52 208.4 166 65.1
Zm00001eb356540 Zea mays HOM05D004014 ORTHO05D005890 6.9e-52 208.0 128 77.3
HPP92_005519 Vanilla planifolia HOM05D004014 ORTHO05D005890 2.0e-51 206.5 139 71.9
Dinv30396 Davidia involucrata HOM05D004014 ORTHO05D005890 5.9e-51 204.9 116 82.8
Pp3c7_7460 Physcomitrium patens HOM05D004014 ORTHO05D005890 1.0e-47 194.1 170 60.6
SMO307G0086 Selaginella moellendorffii HOM05D004014 ORTHO05D005890 3.4e-43 179.1 133 64.7
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 6.5e-42 174.9 114 78.1
AagrBONN_evm.TU.Sc2ySwM_117.798 Anthoceros agrestis HOM05D004014 ORTHO05D005890 3.2e-41 172.6 152 57.9
Gohir.A10G062050 Gossypium hirsutum HOM05D004014 ORTHO05D005890 4.2e-41 172.2 198 51.5
BcaC09g48419 Brassica carinata HOM05D004014 ORTHO05D005890 1.6e-40 170.2 192 53.1
Oeu002520.1 Olea europaea HOM05D004014 ORTHO05D005890 1.4e-39 167.2 115 73.0
Mapoly0134s0030 Marchantia polymorpha HOM05D004014 ORTHO05D005890 9.7e-38 161.0 153 55.6
C01p50000 Brassica napus HOM05D004014 ORTHO05D005890 4.1e-36 155.6 188 51.1
BolC1t04957H Brassica oleracea HOM05D004014 ORTHO05D005890 3.2e-33 146.0 202 47.5
CBR_g3328 Chara braunii HOM05D004014 ORTHO05D005890 4.7e-32 142.1 155 45.8
PSO832G2035 Papaver somniferum HOM05D004014 ORTHO05D005890 6.7e-31 138.3 108 63.0
Cpa.g.sc131.37 Carica papaya HOM05D004014 ORTHO05D005890 8.2e-29 131.3 83 79.5
Ca_11704_v3 Cicer arietinum L. HOM05D004014 ORTHO05D148986 2.2e-26 123.2 93 63.4
Ca_23623_v3 Cicer arietinum L. HOM05D004014 ORTHO05D005890 8.5e-26 121.3 83 68.7
Rhsim12G0192600 Rhododendron simsii HOM05D004014 ORTHO05D005890 2.7e-24 116.3 145 47.6
PRCOL_00000017 Prasinoderma coloniale HOM05D004014 ORTHO05D005890 6.8e-23 111.7 150 40.7
Cre17.g726050 Chlamydomonas reinhardtii HOM05D004014 ORTHO05D005890 2.2e-21 106.7 154 39.0
Haze_26391 Corylus avellana HOM05D004014 ORTHO05D005890 1.3e-18 97.4 178 34.3
Lsat_1_v5_gn_5_53240 Lactuca sativa HOM05D004014 ORTHO05D018183 2.8e-16 89.7 50 82.0
Sp1g38350 Schrenkiella parvula HOM05D004014 ORTHO05D005890 3.4e-14 82.8 85 58.8
Aqoxy3G00091 Aquilegia oxysepala HOM05D004014 ORTHO05D031250 1.1e-12 77.8 140 40.0
CSS0012463 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D018183 4.5e-11 72.4 67 58.2
CSS0035663 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D018183 2.3e-10 70.1 67 56.7
MCO05G115 Micromonas commoda HOM05D004014 ORTHO05D005890 1.5e-09 67.4 118 33.9
CSS0012386 Camellia sinensis var. sinensis HOM05D004014 ORTHO05D018183 9.5e-09 64.7 66 53.0
A05p27340 Brassica napus HOM05D004014 ORTHO05D027854 3.6e-08 62.8 76 53.9
C05p42250 Brassica napus HOM05D004014 ORTHO05D027854 1.2e-06 57.8 76 48.7
BolC5t32953H Brassica oleracea HOM05D004014 ORTHO05D027854 1.2e-06 57.8 76 48.7
Actinidia39120 Actinidia chinensis HOM05D004014 ORTHO05D018183 4.4e-06 55.8 59 49.2


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