Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1739 Capsella rubella HOM05D007345 ORTHO05D009277 3.6e-129 464.9 237 100.0
CARHR093010 Cardamine hirsuta HOM05D007345 ORTHO05D009277 1.7e-118 429.5 237 90.3
AT3G17670 Arabidopsis thaliana HOM05D007345 ORTHO05D009277 2.2e-118 429.1 237 91.6
AL3G30780 Arabidopsis lyrata HOM05D007345 ORTHO05D009277 1.6e-116 422.9 229 93.0
Sp3g15810 Schrenkiella parvula HOM05D007345 ORTHO05D009277 4.3e-114 414.8 233 89.3
Thhalv10021436m.g Eutrema salsugineum HOM05D007345 ORTHO05D009277 2.8e-113 412.1 237 87.8
BraA05t22048Z Brassica rapa HOM05D007345 ORTHO05D009277 6.9e-112 407.5 237 84.0
BcaB06g25825 Brassica carinata HOM05D007345 ORTHO05D009277 1.2e-111 406.8 237 84.8
C05p48720 Brassica napus HOM05D007345 ORTHO05D009277 9.9e-111 403.7 235 83.8
BolC5t33608H Brassica oleracea HOM05D007345 ORTHO05D009277 9.9e-111 403.7 235 83.8
A05p32180 Brassica napus HOM05D007345 ORTHO05D009277 2.9e-110 402.1 237 83.1
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 7.9e-108 394.0 237 81.9
Cpa.g.sc111.41 Carica papaya HOM05D007345 ORTHO05D009277 1.0e-67 260.8 216 58.3
Ciclev10021617m.g Citrus clementina HOM05D007345 ORTHO05D009277 1.0e-67 260.8 213 60.1
Atru.chr9.353 Acer truncatum HOM05D007345 ORTHO05D009277 1.2e-66 257.3 230 55.7
Sed0020487 Sechium edule HOM05D007345 ORTHO05D009277 2.8e-65 252.7 220 57.3
CiPaw.16G072000 Carya illinoinensis HOM05D007345 ORTHO05D009277 1.8e-64 250.0 244 54.1
CsaV3_1G005120 Cucumis sativus L. HOM05D007345 ORTHO05D009277 2.4e-64 249.6 215 56.7
Medtr3g015440 Medicago truncatula HOM05D007345 ORTHO05D009277 9.1e-64 247.7 232 53.0
Thecc.03G072800 Theobroma cacao HOM05D007345 ORTHO05D009277 2.7e-63 246.1 225 55.1
Potri.015G029700 Populus trichocarpa HOM05D007345 ORTHO05D009277 5.9e-63 245.0 226 51.3
Ca_17167_v3 Cicer arietinum L. HOM05D007345 ORTHO05D009277 7.7e-63 244.6 232 53.9
COL.COLO4_05810 Corchorus olitorius HOM05D007345 ORTHO05D009277 1.3e-62 243.8 218 56.0
Prupe.5G242200 Prunus persica HOM05D007345 ORTHO05D009277 2.2e-62 243.0 227 56.4
MD06G1238300 Malus domestica HOM05D007345 ORTHO05D009277 2.9e-62 242.7 223 57.8
GSVIVG01029370001 Vitis vinifera HOM05D007345 ORTHO05D009277 3.8e-62 242.3 211 56.9
FAN08G2921 Fragaria x ananassa HOM05D007345 ORTHO05D009277 6.5e-62 241.5 212 56.6
LjContig00484g0026271 Lotus japonicus HOM05D007345 ORTHO05D009277 6.5e-62 241.5 226 55.3
Cfa017791 Carpinus fangiana HOM05D007345 ORTHO05D009277 8.5e-62 241.1 233 52.8
FAN18G3356 Fragaria x ananassa HOM05D007345 ORTHO05D009277 8.5e-62 241.1 212 57.5
TAR485G0005 Trochodendron aralioides HOM05D007345 ORTHO05D009277 1.5e-61 240.4 225 52.9
TWI60G0762 Tripterygium wilfordii HOM05D007345 ORTHO05D009277 2.5e-61 239.6 219 56.6
TAR629G2718 Trochodendron aralioides HOM05D007345 ORTHO05D009277 2.5e-61 239.6 225 52.9
Glyma.05G249000 Glycine max HOM05D007345 ORTHO05D009277 4.2e-61 238.8 218 57.3
Eucgr.H00620 Eucalyptus grandis HOM05D007345 ORTHO05D009277 5.5e-61 238.4 233 51.5
FAN04G1809 Fragaria x ananassa HOM05D007345 ORTHO05D009277 1.2e-60 237.3 220 56.4
RcHm_v2.0_Chr7g0177311 Rosa chinensis HOM05D007345 ORTHO05D009277 1.2e-60 237.3 213 56.8
TAR629G0192 Trochodendron aralioides HOM05D007345 ORTHO05D009277 1.6e-60 236.9 225 52.4
arahy.Tifrunner.gnm1.ann1.TRXD5D Arachis hypogaea HOM05D007345 ORTHO05D009277 3.6e-60 235.7 220 55.5
arahy.Tifrunner.gnm1.ann1.X12NHK Arachis hypogaea HOM05D007345 ORTHO05D009277 3.6e-60 235.7 220 55.5
CANSAT01G1136 Cannabis sativa HOM05D007345 ORTHO05D009277 4.7e-60 235.3 220 55.0
Lalb_Chr09g0330151 Lupinus albus HOM05D007345 ORTHO05D009277 1.4e-59 233.8 229 51.5
Haze_18424 Corylus avellana HOM05D007345 ORTHO05D009277 1.8e-59 233.4 204 55.9
Sabra15G0024900 Salix brachista HOM05D007345 ORTHO05D009277 2.3e-59 233.0 204 53.9
Sc10g0008500 Simmondsia chinensis HOM05D007345 ORTHO05D009277 3.0e-59 232.6 211 54.5
ClCG04G012580 Citrullus lanatus HOM05D007345 ORTHO05D009277 4.0e-59 232.3 247 51.0
PGR083G0906 Punica granatum HOM05D007345 ORTHO05D009277 5.2e-59 231.9 225 52.4
Dinv13291 Davidia involucrata HOM05D007345 ORTHO05D009277 6.8e-59 231.5 216 52.8
FvH4_5g18270 Fragaria vesca HOM05D007345 ORTHO05D009277 1.5e-58 230.3 204 57.4
Hma1.2p1_0403F.1_g145230 Hydrangea macrophylla HOM05D007345 ORTHO05D009277 1.5e-58 230.3 215 53.0
Oeu061194.1 Olea europaea HOM05D007345 ORTHO05D009277 2.8e-57 226.1 227 52.0
Phvul.002G333600 Phaseolus vulgaris HOM05D007345 ORTHO05D009277 2.8e-57 226.1 211 54.0
Actinidia35146 Actinidia chinensis HOM05D007345 ORTHO05D009277 7.0e-56 221.5 217 51.2
Cc00_g18760 Coffea canephora HOM05D007345 ORTHO05D009277 7.0e-56 221.5 219 53.4
EL10Ac8g19438 Beta vulgaris HOM05D007345 ORTHO05D009277 2.7e-55 219.5 211 51.7
Manes.02G214200 Manihot esculenta HOM05D007345 ORTHO05D009277 7.7e-55 218.0 220 49.1
Migut.D02059 Erythranthe guttata HOM05D007345 ORTHO05D009277 1.0e-54 217.6 229 49.3
HanXRQChr13g0409411 Helianthus annuus HOM05D007345 ORTHO05D009277 1.7e-54 216.9 211 51.7
Rhsim12G0136700 Rhododendron simsii HOM05D007345 ORTHO05D009277 3.8e-54 215.7 221 50.2
Aqoxy3G04287 Aquilegia oxysepala HOM05D007345 ORTHO05D009277 6.6e-54 214.9 216 50.0
CSS0049327 Camellia sinensis var. sinensis HOM05D007345 ORTHO05D009277 8.6e-54 214.5 217 51.6
Lj5A166T75 Lonicera japonica HOM05D007345 ORTHO05D009277 1.5e-53 213.8 210 52.4
SalBow1G0799 Salvia bowleyana HOM05D007345 ORTHO05D009277 1.5e-53 213.8 242 45.9
AUR62033076 Chenopodium quinoa HOM05D007345 ORTHO05D009277 9.5e-53 211.1 214 49.5
CDE05G0430 Ceratophyllum demersum HOM05D007345 ORTHO05D009277 1.6e-52 210.3 217 49.3
Nitab4.5_0004612g0070 Nicotiana tabacum HOM05D000066 ORTHO05D000003 1.6e-52 210.3 201 52.2
CAN.G1909.2 Capsicum annuum HOM05D007345 ORTHO05D009277 2.8e-52 209.5 222 48.6
Solyc03g098440.4 Solanum lycopersicum HOM05D007345 ORTHO05D009277 3.6e-52 209.1 217 50.7
Nitab4.5_0000782g0230 Nicotiana tabacum HOM05D000001 ORTHO05D000003 8.0e-52 208.0 222 48.2
PSO782G0509 Papaver somniferum HOM05D007345 ORTHO05D009277 8.0e-52 208.0 218 46.8
unitig_0.g26 Utricularia gibba HOM05D007345 ORTHO05D009277 8.0e-52 208.0 240 43.8
Peaxi162Scf00171g00331 Petunia axillaris HOM05D007345 ORTHO05D009277 2.0e-50 203.4 207 51.7
Sopen03g029180 Solanum pennellii HOM05D007345 ORTHO05D009277 3.4e-50 202.6 220 49.5
VMungo0251G1758 Vigna mungo HOM05D007345 ORTHO05D009277 6.3e-49 198.4 236 48.3
Lsat_1_v5_gn_3_108980 Lactuca sativa HOM05D007345 ORTHO05D009277 4.1e-48 195.7 215 47.4
SGA_v2.0_scaffold164G38118 Striga asiatica HOM05D007345 ORTHO05D009277 9.2e-48 194.5 218 46.8
AUR62034041 Chenopodium quinoa HOM05D007345 ORTHO05D009277 2.3e-46 189.9 221 46.2
HPP92_025754 Vanilla planifolia HOM05D007345 ORTHO05D009277 2.9e-46 189.5 222 45.0
HPP92_025712 Vanilla planifolia HOM05D007345 ORTHO05D009277 5.0e-46 188.7 222 45.0
Os04g0674100 Oryza sativa ssp. japonica HOM05D007345 ORTHO05D009277 1.2e-44 184.1 253 41.9
ATR0618G142 Amborella trichopoda HOM05D007345 ORTHO05D009277 1.6e-44 183.7 219 44.7
Zm00001eb066530 Zea mays HOM05D007345 ORTHO05D009277 1.2e-42 177.6 217 42.4
Nn4g24918 Nelumbo nucifera HOM05D007345 ORTHO05D009277 9.8e-42 174.5 168 52.4
SMO352G0035 Selaginella moellendorffii HOM05D007345 ORTHO05D009277 8.3e-41 171.4 233 39.1
Mapoly0014s0070 Marchantia polymorpha HOM05D007345 ORTHO05D009277 1.4e-40 170.6 221 39.4
CBR_g52222 Chara braunii HOM05D007345 ORTHO05D009277 2.4e-40 169.9 215 40.9
Ah.09g231730 Amaranthus hybridus HOM05D007345 ORTHO05D009277 7.0e-40 168.3 201 43.8
PGSC0003DMG400010180 Solanum tuberosum HOM05D007345 ORTHO05D009277 4.6e-39 165.6 312 34.9
Pp3c11_25980 Physcomitrium patens HOM05D007345 ORTHO05D009277 6.0e-39 165.2 215 40.5
ECA240G0690 Erigeron canadensis HOM05D007345 ORTHO05D009277 4.7e-36 155.6 173 47.4
MELO3C001950.2 Cucumis melo HOM05D007345 ORTHO05D009277 6.2e-36 155.2 141 55.3
DCAR_023255 Daucus carota HOM05D007345 ORTHO05D009277 1.8e-35 153.7 185 44.3
FAN13G2172 Fragaria x ananassa HOM05D007345 ORTHO05D009277 3.4e-34 149.4 147 54.4
vmacro16392 Vaccinium macrocarpon HOM05D007345 ORTHO05D009277 3.2e-32 142.9 142 50.7
Psat7g000360 Pisum sativum HOM05D007345 ORTHO05D009277 4.1e-32 142.5 144 52.8
AagrBONN_evm.TU.Sc2ySwM_117.2683 Anthoceros agrestis HOM05D007345 ORTHO05D009277 6.6e-30 135.2 172 40.1
PSO063G1698 Papaver somniferum HOM05D007345 ORTHO05D009277 3.3e-29 132.9 218 34.9
SEGI_13495 Sequoiadendron giganteum HOM05D007345 ORTHO05D009277 2.1e-28 130.2 172 41.3
CAN.G1635.20 Capsicum annuum HOM05D007345 ORTHO05D009277 6.2e-28 128.6 213 37.1
Lj9C350T12 Lonicera japonica HOM05D000001 ORTHO05D009373 7.6e-26 121.7 164 44.5
Zm00001eb184330 Zea mays HOM05D007345 ORTHO05D009277 7.1e-24 115.2 161 37.9
Eucgr.H00622 Eucalyptus grandis HOM05D007345 ORTHO05D009277 5.1e-22 109.0 99 50.5
Cre16.g674534 Chlamydomonas reinhardtii HOM05D007345 ORTHO05D009277 2.5e-21 106.7 206 33.5
MSTRG.9709 Avicennia marina HOM05D007345 ORTHO05D009277 2.1e-20 103.6 138 41.3
PRCOL_00001636 Prasinoderma coloniale HOM05D007345 ORTHO05D009277 4.9e-09 65.9 54 53.7
ECA246G2944 Erigeron canadensis HOM05D005920 ORTHO05D007211 4.2e-08 62.8 108 33.3
Hund22393 Selenicereus undatus HOM05D007345 ORTHO05D009277 1.6e-07 60.8 50 58.0
Ah.07g204140 Amaranthus hybridus HOM05D006451 ORTHO05D007680 2.3e-06 57.0 144 30.6
AL1G23570 Arabidopsis lyrata HOM05D002462 ORTHO05D002893 2.3e-06 57.0 89 33.7
BcaB04g17511 Brassica carinata HOM05D000081 ORTHO05D011185 3.9e-06 56.2 85 43.5
CDE09G0226 Ceratophyllum demersum HOM05D005920 ORTHO05D007211 3.9e-06 56.2 108 31.5
Sc25g0004270 Simmondsia chinensis HOM05D006451 ORTHO05D007680 3.9e-06 56.2 114 34.2
Sed0008444 Sechium edule HOM05D002462 ORTHO05D002893 6.6e-06 55.5 104 31.7
Nitab4.5_0001273g0050 Nicotiana tabacum HOM05D005920 ORTHO05D007211 8.7e-06 55.1 108 32.4
Peaxi162Scf00914g00016 Petunia axillaris HOM05D005920 ORTHO05D007211 8.7e-06 55.1 108 31.5


User provided reference genes

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