Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0003s1246 Capsella rubella HOM05D004814 ORTHO05D005778 7.1e-99 364.0 193 100.0
AL3G24860 Arabidopsis lyrata HOM05D004814 ORTHO05D005778 3.1e-86 322.0 197 90.4
AT3G13120 Arabidopsis thaliana HOM05D004814 ORTHO05D005778 9.0e-86 320.5 197 89.8
CARHR087710 Cardamine hirsuta HOM05D004814 ORTHO05D005778 4.3e-80 301.6 198 86.4
Thhalv10021566m.g Eutrema salsugineum HOM05D004814 ORTHO05D005778 4.8e-79 298.1 201 82.1
Aa31LG8G330 Aethionema arabicum HOM05D004814 ORTHO05D005778 2.0e-77 292.7 201 81.1
BolC5t34154H Brassica oleracea HOM05D004814 ORTHO05D005778 5.5e-75 284.6 200 81.5
BcaC05g29209 Brassica carinata HOM05D004814 ORTHO05D005778 9.4e-75 283.9 200 81.5
C05p54820 Brassica napus HOM05D004814 ORTHO05D005778 9.4e-75 283.9 200 81.5
Sp3g11290 Schrenkiella parvula HOM05D004814 ORTHO05D005778 7.9e-74 280.8 202 80.7
BcaNung05270 Brassica carinata HOM05D004814 ORTHO05D005778 3.9e-73 278.5 196 82.1
BcaB06g25486 Brassica carinata HOM05D004814 ORTHO05D005778 6.7e-73 277.7 202 81.7
A01p40420 Brassica napus HOM05D004814 ORTHO05D005778 6.7e-73 277.7 197 81.7
BraA01t04077Z Brassica rapa HOM05D004814 ORTHO05D005778 6.7e-73 277.7 197 81.7
BraA05t22442Z Brassica rapa HOM05D004814 ORTHO05D005778 1.5e-72 276.6 200 80.0
A05p36420 Brassica napus HOM05D004814 ORTHO05D005778 9.7e-72 273.9 200 79.0
C03p46130 Brassica napus HOM05D004814 ORTHO05D005778 1.3e-71 273.5 196 80.6
THA.LOC104815700 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 1.3e-71 273.5 204 75.0
BcaC01g04010 Brassica carinata HOM05D004814 ORTHO05D005778 1.7e-71 273.1 196 80.1
BolC3t16886H Brassica oleracea HOM05D004814 ORTHO05D005778 1.7e-71 273.1 196 80.1
Aa31LG10G250 Aethionema arabicum HOM05D004814 ORTHO05D005778 2.4e-70 269.2 201 77.6
THA.LOC104810287 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 3.1e-70 268.9 201 76.1
THA.LOC104822735 Tarenaya hassleriana HOM05D004814 ORTHO05D005778 5.3e-70 268.1 200 76.0
A03p38040 Brassica napus HOM05D004814 ORTHO05D005778 1.2e-69 266.9 197 79.2
BraA03t12957Z Brassica rapa HOM05D004814 ORTHO05D005778 1.3e-68 263.5 207 76.3
CANSAT11G0174 Cannabis sativa HOM05D004814 ORTHO05D005778 1.1e-64 250.4 209 68.9
FAN16G2593 Fragaria x ananassa HOM05D004814 ORTHO05D005778 1.3e-63 246.9 202 69.8
Gorai.007G310400 Gossypium raimondii HOM05D004814 ORTHO05D005778 2.2e-63 246.1 193 72.0
QL08p004842 Quercus lobata HOM05D004814 ORTHO05D005778 2.2e-63 246.1 213 67.6
Gohir.D11G287000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 3.7e-63 245.4 193 72.0
FvH4_3g29500 Fragaria vesca HOM05D004814 ORTHO05D005778 4.8e-63 245.0 202 69.8
FAN11G3417 Fragaria x ananassa HOM05D004814 ORTHO05D005778 4.8e-63 245.0 202 69.8
Gohir.A11G276900 Gossypium hirsutum HOM05D004814 ORTHO05D005778 4.8e-63 245.0 193 71.5
FAN21G1289 Fragaria x ananassa HOM05D004814 ORTHO05D005778 6.3e-63 244.6 202 69.8
Thecc.07G016800 Theobroma cacao HOM05D004814 ORTHO05D005778 1.8e-62 243.0 194 72.2
FAN25G3790 Fragaria x ananassa HOM05D004814 ORTHO05D005778 4.1e-62 241.9 202 70.3
Cfa020215 Carpinus fangiana HOM05D004814 ORTHO05D005778 5.3e-62 241.5 213 67.6
RcHm_v2.0_Chr5g0054381 Rosa chinensis HOM05D004814 ORTHO05D005778 5.3e-62 241.5 204 69.6
Gohir.A01G090000 Gossypium hirsutum HOM05D004814 ORTHO05D005778 7.0e-62 241.1 194 71.6
CiPaw.12G136400 Carya illinoinensis HOM05D004814 ORTHO05D005778 9.1e-62 240.7 213 66.2
Gohir.D01G075300 Gossypium hirsutum HOM05D004814 ORTHO05D005778 9.1e-62 240.7 194 71.1
Gorai.002G098500 Gossypium raimondii HOM05D004814 ORTHO05D005778 9.1e-62 240.7 194 71.1
TWI38G0785 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 1.2e-61 240.4 208 67.3
TWI39G1010 Tripterygium wilfordii HOM05D004814 ORTHO05D005778 1.2e-61 240.4 207 68.1
Atru.chr2.3664 Acer truncatum HOM05D004814 ORTHO05D005778 2.6e-61 239.2 199 71.4
Haze_09803 Corylus avellana HOM05D004814 ORTHO05D005778 7.7e-61 237.7 195 69.7
A01p40680 Brassica napus HOM05D004814 ORTHO05D005778 1.3e-60 236.9 196 71.9
MELO3C024899.2 Cucumis melo HOM05D004814 ORTHO05D005778 5.0e-60 235.0 217 63.1
Duzib213G0234 Durio zibethinus HOM05D004814 ORTHO05D005778 6.5e-60 234.6 195 69.7
Dinv10318 Davidia involucrata HOM05D004814 ORTHO05D005778 8.5e-60 234.2 206 67.0
Oeu049351.1 Olea europaea HOM05D004814 ORTHO05D005778 1.5e-59 233.4 196 68.4
ClCG09G021040 Citrullus lanatus HOM05D004814 ORTHO05D005778 1.9e-59 233.0 218 64.7
Manes.15G061900 Manihot esculenta HOM05D004814 ORTHO05D005778 5.5e-59 231.5 215 64.7
CsaV3_7G018640 Cucumis sativus L. HOM05D004814 ORTHO05D005778 7.2e-59 231.1 214 64.5
MD03G1187000 Malus domestica HOM05D004814 ORTHO05D005778 7.2e-59 231.1 207 64.3
Manes.03G139872 Manihot esculenta HOM05D004814 ORTHO05D005778 7.2e-59 231.1 216 63.9
COL.COLO4_09806 Corchorus olitorius HOM05D004814 ORTHO05D005778 9.4e-59 230.7 194 68.6
Dinv40842 Davidia involucrata HOM05D004814 ORTHO05D005778 1.2e-58 230.3 208 66.8
GSVIVG01014640001 Vitis vinifera HOM05D004814 ORTHO05D005778 2.1e-58 229.6 207 66.2
Potri.011G092800 Populus trichocarpa HOM05D004814 ORTHO05D005778 3.6e-58 228.8 213 62.9
Lsat_1_v5_gn_9_90400 Lactuca sativa HOM05D004814 ORTHO05D005778 6.1e-58 228.0 195 67.2
DCAR_013223 Daucus carota HOM05D004814 ORTHO05D005778 8.0e-58 227.6 192 68.8
Ciclev10009615m.g Citrus clementina HOM05D004814 ORTHO05D005778 1.0e-57 227.3 195 67.2
PGR031G1774 Punica granatum HOM05D004814 ORTHO05D005778 1.0e-57 227.3 193 67.9
AUR62036421 Chenopodium quinoa HOM05D004814 ORTHO05D005778 1.4e-57 226.9 198 66.2
AUR62036427 Chenopodium quinoa HOM05D004814 ORTHO05D005778 1.4e-57 226.9 198 66.2
AUR62040646 Chenopodium quinoa HOM05D004814 ORTHO05D005778 1.4e-57 226.9 198 66.2
Potri.001G365600 Populus trichocarpa HOM05D004814 ORTHO05D005778 1.8e-57 226.5 211 63.0
Oeu057089.1 Olea europaea HOM05D004814 ORTHO05D005778 2.3e-57 226.1 196 66.3
ECA240G4731 Erigeron canadensis HOM05D001580 ORTHO05D001517 3.0e-57 225.7 140 80.0
Glyma.08G327500 Glycine max HOM05D004814 ORTHO05D005778 3.0e-57 225.7 211 66.4
Peaxi162Scf00900g00010 Petunia axillaris HOM05D004814 ORTHO05D005778 3.0e-57 225.7 148 79.1
Sabra16G0239200 Salix brachista HOM05D004814 ORTHO05D005778 3.0e-57 225.7 215 61.9
AUR62017069 Chenopodium quinoa HOM05D004814 ORTHO05D005778 3.9e-57 225.3 198 66.2
Ah.06g181280 Amaranthus hybridus HOM05D004814 ORTHO05D005778 5.2e-57 224.9 195 67.2
arahy.Tifrunner.gnm1.ann1.X98J9H Arachis hypogaea HOM05D004814 ORTHO05D005778 6.7e-57 224.6 213 65.3
CAN.G492.31 Capsicum annuum HOM05D004814 ORTHO05D005778 6.7e-57 224.6 198 68.2
Sed0017349 Sechium edule HOM05D004814 ORTHO05D005778 6.7e-57 224.6 216 64.4
Ah.04g166490 Amaranthus hybridus HOM05D004814 ORTHO05D005778 8.8e-57 224.2 195 66.2
Glyma.18G079900 Glycine max HOM05D004814 ORTHO05D005778 8.8e-57 224.2 209 66.0
Hma1.2p1_0889F.1_g232870 Hydrangea macrophylla HOM05D004814 ORTHO05D005778 8.8e-57 224.2 218 61.9
Prupe.4G239600 Prunus persica HOM05D004814 ORTHO05D005778 8.8e-57 224.2 206 64.1
C01p51960 Brassica napus HOM05D004814 ORTHO05D005778 1.5e-56 223.4 170 73.5
Sabra11G0087000 Salix brachista HOM05D004814 ORTHO05D005778 2.0e-56 223.0 213 62.9
Ca_20138_v3 Cicer arietinum L. HOM05D004814 ORTHO05D005778 2.6e-56 222.6 208 66.3
EL10Ac4g07605 Beta vulgaris HOM05D004814 ORTHO05D005778 4.4e-56 221.9 199 64.8
Nn1g03216 Nelumbo nucifera HOM05D004814 ORTHO05D005778 4.4e-56 221.9 210 63.8
Sopen10g001990 Solanum pennellii HOM05D004814 ORTHO05D005778 4.4e-56 221.9 197 66.5
arahy.Tifrunner.gnm1.ann1.CWZH2K Arachis hypogaea HOM05D004814 ORTHO05D005778 5.7e-56 221.5 214 64.5
PGSC0003DMG400014378 Solanum tuberosum HOM05D004814 ORTHO05D005778 5.7e-56 221.5 197 66.5
arahy.Tifrunner.gnm1.ann1.RG8M6K Arachis hypogaea HOM05D004814 ORTHO05D005778 9.7e-56 220.7 215 63.7
arahy.Tifrunner.gnm1.ann1.0CA1AM Arachis hypogaea HOM05D004814 ORTHO05D005778 1.3e-55 220.3 214 63.1
Lalb_Chr05g0211691 Lupinus albus HOM05D004814 ORTHO05D005778 1.3e-55 220.3 210 62.4
MD11G1202000 Malus domestica HOM05D004814 ORTHO05D005778 1.7e-55 219.9 208 63.9
Nitab4.5_0006756g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 2.2e-55 219.5 197 65.0
TAR626G1431 Trochodendron aralioides HOM05D004814 ORTHO05D005778 2.8e-55 219.2 172 70.9
Phvul.001G030600 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 6.3e-55 218.0 211 64.0
Solyc10g006030.3 Solanum lycopersicum HOM05D004814 ORTHO05D005778 6.3e-55 218.0 197 66.0
Cc05_g14790 Coffea canephora HOM05D004814 ORTHO05D005778 8.2e-55 217.6 204 61.8
HanXRQChr13g0408121 Helianthus annuus HOM05D004814 ORTHO05D005778 8.2e-55 217.6 193 65.8
CSS0025876 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 1.1e-54 217.2 209 67.0
HanXRQChr03g0061321 Helianthus annuus HOM05D004814 ORTHO05D005778 1.1e-54 217.2 193 64.8
vmacro22713 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 1.1e-54 217.2 208 63.0
Actinidia30418 Actinidia chinensis HOM05D004814 ORTHO05D005778 1.4e-54 216.9 208 66.3
Nitab4.5_0003491g0010 Nicotiana tabacum HOM05D004814 ORTHO05D005778 1.4e-54 216.9 198 64.1
Sc16g0007970 Simmondsia chinensis HOM05D004814 ORTHO05D005778 1.4e-54 216.9 202 64.4
PSO675G8482 Papaver somniferum HOM05D004814 ORTHO05D005778 1.8e-54 216.5 208 63.9
Phvul.006G055300 Phaseolus vulgaris HOM05D004814 ORTHO05D005778 2.4e-54 216.1 211 64.0
PSO541G0969 Papaver somniferum HOM05D004814 ORTHO05D005778 4.1e-54 215.3 204 63.2
Actinidia05019 Actinidia chinensis HOM05D004814 ORTHO05D005778 5.3e-54 214.9 207 64.7
MSTRG.14478 Avicennia marina HOM05D004814 ORTHO05D005778 1.6e-53 213.4 198 65.7
Eucgr.F03697 Eucalyptus grandis HOM05D004814 ORTHO05D005778 2.6e-53 212.6 193 65.8
Cpa.g.sc12.175 Carica papaya HOM05D004814 ORTHO05D005778 3.5e-53 212.2 104 98.1
CSS0019029 Camellia sinensis var. sinensis HOM05D004814 ORTHO05D005778 4.5e-53 211.8 121 86.8
Hund01909 Selenicereus undatus HOM05D004814 ORTHO05D005778 4.5e-53 211.8 193 61.7
TAR629G3287 Trochodendron aralioides HOM05D004814 ORTHO05D005778 4.5e-53 211.8 204 61.8
Aqoxy4G02247 Aquilegia oxysepala HOM05D004814 ORTHO05D005778 5.9e-53 211.5 205 61.5
Medtr3g058430 Medicago truncatula HOM05D004814 ORTHO05D005778 7.7e-53 211.1 197 66.0
Rhsim06G0227300 Rhododendron simsii HOM05D004814 ORTHO05D005778 1.0e-52 210.7 208 60.6
Lj1P888T30 Lonicera japonica HOM05D004814 ORTHO05D005778 1.7e-52 209.9 104 97.1
TPR.G30737 Trifolium pratense HOM05D004814 ORTHO05D005778 2.2e-52 209.5 198 64.1
VMungo0248G0001 Vigna mungo HOM05D004814 ORTHO05D005778 2.9e-52 209.1 104 96.2
BraA01t04102Z Brassica rapa HOM05D004814 ORTHO05D005778 8.5e-52 207.6 104 97.1
CDE10G1086 Ceratophyllum demersum HOM05D004814 ORTHO05D005778 1.1e-51 207.2 111 89.2
ATR0624G087 Amborella trichopoda HOM05D004814 ORTHO05D005778 1.5e-51 206.8 104 95.2
Os03g0196800 Oryza sativa ssp. japonica HOM05D004814 ORTHO05D005778 1.5e-51 206.8 132 75.8
Psat5g170120 Pisum sativum HOM05D004814 ORTHO05D005778 4.2e-51 205.3 207 63.3
Zm00001eb401060 Zea mays HOM05D004814 ORTHO05D005778 4.2e-51 205.3 117 82.1
unitig_62.g23297 Utricularia gibba HOM05D004814 ORTHO05D005778 9.4e-51 204.1 185 63.8
SGA_v2.0_scaffold8G04398 Striga asiatica HOM05D004814 ORTHO05D005778 1.0e-49 200.7 204 59.3
QL05p065674 Quercus lobata HOM05D004814 ORTHO05D005778 2.3e-49 199.5 112 88.4
HPP92_020399 Vanilla planifolia HOM05D004814 ORTHO05D005778 3.0e-49 199.1 193 62.2
Actinidia05024 Actinidia chinensis HOM05D004814 ORTHO05D005778 5.2e-49 198.4 194 61.9
Zm00001eb008100 Zea mays HOM05D004814 ORTHO05D005778 1.2e-48 197.2 193 58.0
QL05p065593 Quercus lobata HOM05D004814 ORTHO05D005778 1.1e-46 190.7 103 92.2
MBI19_g45743_MAGBIO Magnolia biondii HOM05D004814 ORTHO05D005778 1.8e-46 189.9 100 89.0
AagrBONN_evm.TU.Sc2ySwM_117.1321 Anthoceros agrestis HOM05D004814 ORTHO05D005778 2.5e-43 179.5 104 80.8
Pp3c24_19230 Physcomitrium patens HOM05D004814 ORTHO05D005778 3.0e-41 172.6 171 56.7
Pp3c20_8830 Physcomitrium patens HOM05D004814 ORTHO05D005778 1.5e-40 170.2 189 55.6
Mapoly0009s0107 Marchantia polymorpha HOM05D004814 ORTHO05D005778 3.4e-40 169.1 198 52.5
PSO832G2117 Papaver somniferum HOM05D004814 ORTHO05D005778 3.4e-40 169.1 201 53.7
Pp3c8_18990 Physcomitrium patens HOM05D004814 ORTHO05D005778 3.7e-39 165.6 192 52.1
SEGI_32296 Sequoiadendron giganteum HOM05D004814 ORTHO05D005778 2.7e-37 159.5 101 75.2
CBR_g19640 Chara braunii HOM05D004814 ORTHO05D005778 3.3e-35 152.5 196 48.0
SMO228G0012 Selaginella moellendorffii HOM05D004814 ORTHO05D005778 6.8e-33 144.8 115 60.0
MSTRG.13015 Avicennia marina HOM05D004814 ORTHO05D005778 1.3e-31 140.6 153 55.6
MCO07G521 Micromonas commoda HOM05D004814 ORTHO05D005778 5.4e-30 135.2 99 63.6
PRCOL_00000430 Prasinoderma coloniale HOM05D004814 ORTHO05D005778 9.8e-24 114.4 100 52.0
Cre03.g195650 Chlamydomonas reinhardtii HOM05D004814 ORTHO05D005778 4.6e-21 105.5 133 42.1
BolC1t05144H Brassica oleracea HOM05D004814 ORTHO05D005778 1.3e-12 77.4 103 58.3
vmacro17432 Vaccinium macrocarpon HOM05D004814 ORTHO05D005778 3.2e-06 56.2 194 33.0


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