Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0002s0836 Capsella rubella HOM05D000390 ORTHO05D001192 9.8e-82 306.6 141 100.0
Carub.0002s1268 Capsella rubella HOM05D000390 ORTHO05D001192 3.4e-50 201.8 160 62.5
Thhalv10018806m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 1.1e-27 127.1 173 44.5
BcaB03g14740 Brassica carinata HOM05D000390 ORTHO05D001192 3.1e-27 125.6 168 44.0
BolC6t39417H Brassica oleracea HOM05D000390 ORTHO05D001192 2.0e-26 122.9 166 44.6
BcaC08g46409 Brassica carinata HOM05D000390 ORTHO05D001192 4.5e-26 121.7 165 44.8
BcaB03g15261 Brassica carinata HOM05D000390 ORTHO05D001192 1.0e-25 120.6 144 46.5
Carub.0002s1267 Capsella rubella HOM05D000390 ORTHO05D001192 1.7e-25 119.8 164 43.9
CARHR058650 Cardamine hirsuta HOM05D000390 ORTHO05D001192 2.9e-25 119.0 161 44.1
Carub.0002s1270 Capsella rubella HOM05D000390 ORTHO05D001192 5.0e-25 118.2 162 43.2
AL2G24590 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 1.4e-24 116.7 166 43.4
Sp5g24750 Schrenkiella parvula HOM05D000390 ORTHO05D001192 5.5e-24 114.8 153 45.1
C06p43410 Brassica napus HOM05D000390 ORTHO05D001192 2.1e-23 112.8 166 41.0
A07p36020 Brassica napus HOM05D000390 ORTHO05D001192 4.6e-23 111.7 166 41.6
BraA07t31182Z Brassica rapa HOM05D000390 ORTHO05D001192 4.6e-23 111.7 166 41.6
Carub.0002s1265 Capsella rubella HOM05D000390 ORTHO05D001192 1.8e-22 109.8 151 41.1
Carub.0002s1266 Capsella rubella HOM05D000390 ORTHO05D001192 1.8e-22 109.8 169 40.8
BcaC08g46410 Brassica carinata HOM05D000390 ORTHO05D001192 3.0e-22 109.0 166 40.4
AL2G24580 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 5.1e-22 108.2 145 44.1
Carub.0002s1264 Capsella rubella HOM05D000390 ORTHO05D001192 5.1e-22 108.2 142 42.3
Thhalv10018712m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 8.8e-22 107.5 142 42.3
BraA07t30974Z Brassica rapa HOM05D000390 ORTHO05D001192 1.1e-21 107.1 142 41.5
A07p33480 Brassica napus HOM05D000390 ORTHO05D001192 2.0e-21 106.3 142 40.8
Carub.0002s1269 Capsella rubella HOM05D000390 ORTHO05D001192 3.3e-21 105.5 163 39.3
AT1G66610 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 4.4e-21 105.1 148 42.6
AT1G66620 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 7.4e-21 104.4 168 40.5
CARHR154710 Cardamine hirsuta HOM05D000390 ORTHO05D001192 9.7e-21 104.0 165 40.0
BcaB03g14735 Brassica carinata HOM05D000390 ORTHO05D001192 1.8e-19 99.8 165 39.4
C06p39870 Brassica napus HOM05D000390 ORTHO05D001192 3.4e-18 95.5 168 36.9
AL2G24600 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 2.2e-17 92.8 166 36.7
BcaC08g46408 Brassica carinata HOM05D000390 ORTHO05D001192 2.9e-17 92.4 161 37.3
BcaB03g14739 Brassica carinata HOM05D000390 ORTHO05D001192 7.2e-16 87.8 147 38.8
Carub.0002s1282 Capsella rubella HOM05D000390 ORTHO05D001192 6.1e-15 84.7 155 36.1
A05p14370 Brassica napus HOM05D000390 ORTHO05D001192 2.6e-13 79.3 168 31.0
BcaB01g04031 Brassica carinata HOM05D000390 ORTHO05D001192 3.3e-13 79.0 129 38.8
BraA05t20365Z Brassica rapa HOM05D000390 ORTHO05D001192 4.4e-13 78.6 168 31.0
Carub.0002s1284 Capsella rubella HOM05D000390 ORTHO05D001192 4.4e-13 78.6 153 34.0
AL7G53060 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 9.7e-13 77.4 143 27.3
AL7G53090 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 1.3e-12 77.0 153 30.1
BcaB02g08022 Brassica carinata HOM05D000390 ORTHO05D001192 2.2e-12 76.3 161 32.3
Thhalv10028216m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 2.8e-12 75.9 155 31.0
AL7G46860 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 6.3e-12 74.7 150 32.0
AL7G46850 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 8.2e-12 74.3 167 28.1
Carub.0007s3314 Capsella rubella HOM05D000390 ORTHO05D001192 8.2e-12 74.3 159 31.4
AT5G37910 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 1.1e-11 73.9 152 28.9
AT5G37870 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 1.4e-11 73.6 163 30.1
Thhalv10028270m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 1.4e-11 73.6 166 28.9
Carub.0002s1278 Capsella rubella HOM05D000390 ORTHO05D001192 2.4e-11 72.8 149 33.6
Carub.0002s1283 Capsella rubella HOM05D000390 ORTHO05D001192 2.4e-11 72.8 148 29.7
Carub.0007s3313 Capsella rubella HOM05D000390 ORTHO05D001192 2.4e-11 72.8 166 31.9
AT1G66630 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 3.1e-11 72.4 80 46.2
Thhalv10027865m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 3.1e-11 72.4 165 30.3
CARHR214810 Cardamine hirsuta HOM05D000390 ORTHO05D001192 1.2e-10 70.5 147 31.3
Thhalv10027866m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 1.2e-10 70.5 167 30.5
BcaC02g09616 Brassica carinata HOM05D000390 ORTHO05D001192 1.6e-10 70.1 175 26.9
C04p44770 Brassica napus HOM05D000390 ORTHO05D001192 1.6e-10 70.1 175 26.9
BolC4t26051H Brassica oleracea HOM05D000390 ORTHO05D001192 1.6e-10 70.1 175 26.9
Thhalv10027864m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 1.6e-10 70.1 172 28.5
AL7G53030 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 2.0e-10 69.7 90 37.8
BolC6t36992H Brassica oleracea HOM05D000390 ORTHO05D001192 2.0e-10 69.7 149 32.2
BcaC08g44353 Brassica carinata HOM05D000390 ORTHO05D001192 2.6e-10 69.3 149 32.2
C06p17960 Brassica napus HOM05D000390 ORTHO05D001192 2.6e-10 69.3 149 32.2
BraA07t29658Z Brassica rapa HOM05D000390 ORTHO05D001192 2.6e-10 69.3 149 31.5
CARHR058600 Cardamine hirsuta HOM05D000390 ORTHO05D001192 2.6e-10 69.3 41 65.9
AT5G37900 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 3.5e-10 68.9 151 31.8
AL7G53100 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 5.9e-10 68.2 162 28.4
Carub.0007s3317 Capsella rubella HOM05D000390 ORTHO05D001192 1.0e-09 67.4 96 37.5
Carub.0008s2352 Capsella rubella HOM05D000390 ORTHO05D001192 1.0e-09 67.4 142 30.3
Thhalv10027819m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 1.0e-09 67.4 90 37.8
AT5G37890 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 1.3e-09 67.0 152 27.0
A07p19520 Brassica napus HOM05D000390 ORTHO05D001192 1.3e-09 67.0 143 32.2
CARHR214690 Cardamine hirsuta HOM05D000390 ORTHO05D001192 1.3e-09 67.0 147 30.6
Carub.0002s1187 Capsella rubella HOM05D000390 ORTHO05D001192 1.7e-09 66.6 157 29.3
Thhalv10028143m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 1.7e-09 66.6 168 27.4
BcaB02g08023 Brassica carinata HOM05D000390 ORTHO05D001192 2.2e-09 66.2 86 39.5
A04p15330 Brassica napus HOM05D000390 ORTHO05D001192 2.2e-09 66.2 163 28.8
BraA04t17174Z Brassica rapa HOM05D000390 ORTHO05D001192 2.2e-09 66.2 163 28.8
Thhalv10027852m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 2.2e-09 66.2 165 28.5
AL7G46870 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 3.8e-09 65.5 40 60.0
Carub.0005s1229 Capsella rubella HOM05D000390 ORTHO05D001192 3.8e-09 65.5 160 26.9
BolC4t26543H Brassica oleracea HOM05D000390 ORTHO05D001192 5.0e-09 65.1 163 30.1
A07p14100 Brassica napus HOM05D000390 ORTHO05D001192 1.5e-08 63.5 84 36.9
BraA07t29168Z Brassica rapa HOM05D000390 ORTHO05D001192 1.5e-08 63.5 84 36.9
Sp7g05350 Schrenkiella parvula HOM05D000390 ORTHO05D001192 1.5e-08 63.5 150 26.7
THA.LOC104825614 Tarenaya hassleriana HOM05D000390 ORTHO05D001192 1.5e-08 63.5 153 30.7
AL7G53110 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 1.9e-08 63.2 86 34.9
Carub.0007s3309 Capsella rubella HOM05D000390 ORTHO05D001192 1.9e-08 63.2 163 28.2
AL7G46840 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 3.2e-08 62.4 137 29.2
BcaC02g09622 Brassica carinata HOM05D000390 ORTHO05D001192 4.2e-08 62.0 164 27.4
C04p44810 Brassica napus HOM05D000390 ORTHO05D001192 4.2e-08 62.0 164 27.4
BolC4t26058H Brassica oleracea HOM05D000390 ORTHO05D001192 4.2e-08 62.0 164 27.4
CARHR214860 Cardamine hirsuta HOM05D000390 ORTHO05D001192 4.2e-08 62.0 87 36.8
BcaB06g27154 Brassica carinata HOM05D000390 ORTHO05D001192 5.5e-08 61.6 171 27.5
Carub.0002s1279 Capsella rubella HOM05D000390 ORTHO05D001192 5.5e-08 61.6 165 26.7
AT5G37930 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 9.4e-08 60.8 89 33.7
BolC6t39077H Brassica oleracea HOM05D000390 ORTHO05D001192 9.4e-08 60.8 85 40.0
Sp7g04100 Schrenkiella parvula HOM05D000390 ORTHO05D001192 9.4e-08 60.8 88 36.4
CARHR214760 Cardamine hirsuta HOM05D000390 ORTHO05D001192 1.2e-07 60.5 84 38.1
Duzib138G1453 Durio zibethinus HOM05D000390 ORTHO05D001192 1.2e-07 60.5 77 35.1
AL8G39760 Arabidopsis lyrata HOM05D000390 ORTHO05D001192 1.6e-07 60.1 145 29.7
AT1G66650 Arabidopsis thaliana HOM05D000390 ORTHO05D001192 1.6e-07 60.1 86 36.0
Sp7g04090 Schrenkiella parvula HOM05D000390 ORTHO05D001192 1.6e-07 60.1 89 36.0
THA.LOC104822444 Tarenaya hassleriana HOM05D000390 ORTHO05D001192 2.1e-07 59.7 143 26.6
Carub.0007s3308 Capsella rubella HOM05D000390 ORTHO05D001192 6.1e-07 58.2 163 25.8
Thhalv10028229m.g Eutrema salsugineum HOM05D000390 ORTHO05D001192 8.0e-07 57.8 173 30.1
Carub.0002s1285 Capsella rubella HOM05D000390 ORTHO05D001192 1.0e-06 57.4 87 31.0
Carub.0005s1231 Capsella rubella HOM05D000390 ORTHO05D001192 1.0e-06 57.4 81 33.3
BcaB03g15257 Brassica carinata HOM05D000390 ORTHO05D001192 1.8e-06 56.6 96 34.4
Carub.0006s2403 Capsella rubella HOM05D000390 ORTHO05D001192 1.8e-06 56.6 143 26.6
BcaB02g07930 Brassica carinata HOM05D000390 ORTHO05D001192 2.3e-06 56.2 84 36.9
CARHR058670 Cardamine hirsuta HOM05D000390 ORTHO05D001192 2.3e-06 56.2 63 50.8
Carub.0002s0834 Capsella rubella HOM05D000390 ORTHO05D001192 3.0e-06 55.8 83 36.1
Sp5g21600 Schrenkiella parvula HOM05D000390 ORTHO05D001192 3.0e-06 55.8 89 37.1
A04p11030 Brassica napus HOM05D000390 ORTHO05D001192 5.2e-06 55.1 95 32.6
A04p11090 Brassica napus HOM05D000390 ORTHO05D001192 5.2e-06 55.1 37 56.8
Sp5g21605 Schrenkiella parvula HOM05D000390 ORTHO05D001192 5.2e-06 55.1 96 30.2
MD09G1260200 Malus domestica HOM05D000390 ORTHO05D001192 6.7e-06 54.7 82 31.7
Carub.0002s1280 Capsella rubella HOM05D000390 ORTHO05D001192 8.8e-06 54.3 40 50.0
Sp7g04030 Schrenkiella parvula HOM05D000390 ORTHO05D001192 8.8e-06 54.3 77 36.4


User provided reference genes

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