Gene: C06p39870

General Information

Structural Information

Species Brassica napus
Gene Identifier C06p39870
Transcript Identifier C06p39870
Gene Type Coding gene
Location C06 : 41123824-41131168 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000390
#Genes/#Species 1264/97
Phylogenetic origin

ID ORTHO05D001192
#Genes/#Species 460/91
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid C06p39870.1_BnaDAR
v5 BnaC06g27520D
single_cell_id C06p39870.1-BnaDAR
ensembl GSBRNA2T00060118001

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006511	IEA	InterPro	ubiquitin-dependent protein catabolic process
GO:0007275	IEA	InterPro	multicellular organism development

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005515	ISO	PLAZA Homology (enrichment)	protein binding	HOM05D000390

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005737	IEA	InterPro	cytoplasm

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR035979	RNA-binding domain superfamily
IPR000504	RNA recognition motif domain
IPR018121	Seven-in-absentia protein, TRAF-like domain
IPR044286	E3 ubiquitin-protein ligase SINA-like, plant
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily

Mapman id	Description
19.2.2.1.4.3.5	Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.E3 ubiquitin ligase (SINA)