Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Carub.0001s1357 Capsella rubella HOM05D006135 ORTHO05D007533 3.2e-170 601.7 303 100.0
Sp1g12090 Schrenkiella parvula HOM05D006135 ORTHO05D007533 3.4e-164 581.6 303 95.7
CARHR014240 Cardamine hirsuta HOM05D006135 ORTHO05D007533 1.4e-162 576.2 303 95.0
AT1G13870 Arabidopsis thaliana HOM05D006135 ORTHO05D007533 2.4e-162 575.5 303 95.7
AL1G25700 Arabidopsis lyrata HOM05D006135 ORTHO05D007533 5.4e-162 574.3 303 96.0
BcaB08g34333 Brassica carinata HOM05D006135 ORTHO05D007533 8.1e-158 560.5 303 91.4
BcaB03g13127 Brassica carinata HOM05D006135 ORTHO05D007533 3.4e-156 555.1 299 91.3
BcaC07g41617 Brassica carinata HOM05D006135 ORTHO05D007533 4.5e-156 554.7 303 91.4
BraA08t35146Z Brassica rapa HOM05D006135 ORTHO05D007533 1.3e-155 553.1 299 90.6
A09p62650 Brassica napus HOM05D006135 ORTHO05D007533 1.7e-155 552.7 303 91.1
A08p32230 Brassica napus HOM05D006135 ORTHO05D007533 3.8e-155 551.6 299 90.3
BraA09t41629Z Brassica rapa HOM05D006135 ORTHO05D007533 3.8e-155 551.6 303 90.8
C08p46210 Brassica napus HOM05D006135 ORTHO05D007533 2.4e-154 548.9 303 90.4
BolC8t52170H Brassica oleracea HOM05D006135 ORTHO05D007533 2.4e-154 548.9 303 90.4
BcaC07g38705 Brassica carinata HOM05D006135 ORTHO05D007533 4.6e-153 544.7 299 89.6
C08p16350 Brassica napus HOM05D006135 ORTHO05D007533 4.6e-153 544.7 299 89.6
BolC8t49259H Brassica oleracea HOM05D006135 ORTHO05D007533 4.6e-153 544.7 299 89.6
Aa31LG1G1130 Aethionema arabicum HOM05D006135 ORTHO05D007533 1.8e-141 506.1 299 84.3
Aa31LG2G7130 Aethionema arabicum HOM05D006135 ORTHO05D007533 6.5e-139 497.7 301 80.7
THA.LOC104824063 Tarenaya hassleriana HOM05D006135 ORTHO05D007533 7.4e-135 484.2 301 79.1
QL03p071327 Quercus lobata HOM05D006135 ORTHO05D007533 7.9e-129 464.2 300 76.3
Lj3g0000255 Lotus japonicus HOM05D006135 ORTHO05D007533 2.3e-128 462.6 300 74.0
VMungo0331G1135 Vigna mungo HOM05D006135 ORTHO05D007533 6.7e-128 461.1 300 75.0
CsaV3_6G032530 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.0e-127 459.5 298 74.5
CsaV3_6G033610 Cucumis sativus L. HOM05D006135 ORTHO05D007533 2.0e-127 459.5 298 74.5
Cpa.g.sc1.112 Carica papaya HOM05D006135 ORTHO05D007533 3.3e-127 458.8 300 75.7
Phvul.010G098900 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 7.4e-127 457.6 300 74.3
Phvul.011G076500 Phaseolus vulgaris HOM05D006135 ORTHO05D007533 7.4e-127 457.6 300 74.3
MELO3C011427.2 Cucumis melo HOM05D006135 ORTHO05D007533 9.7e-127 457.2 298 74.8
RcHm_v2.0_Chr4g0438561 Rosa chinensis HOM05D006135 ORTHO05D007533 9.7e-127 457.2 298 76.2
COL.COLO4_27903 Corchorus olitorius HOM05D006135 ORTHO05D007533 1.7e-126 456.4 300 74.3
Ciclev10032231m.g Citrus clementina HOM05D006135 ORTHO05D007533 2.8e-126 455.7 298 75.8
Duzib268G0538 Durio zibethinus HOM05D006135 ORTHO05D007533 3.7e-126 455.3 300 74.3
Glyma.07G070800 Glycine max HOM05D006135 ORTHO05D007533 4.8e-126 454.9 300 73.7
PGR119G0479 Punica granatum HOM05D006135 ORTHO05D007533 1.1e-125 453.8 302 73.5
Eucgr.G02457 Eucalyptus grandis HOM05D006135 ORTHO05D007533 3.1e-125 452.2 300 74.3
Thecc.02G333100 Theobroma cacao HOM05D006135 ORTHO05D007533 3.1e-125 452.2 300 74.0
CiPaw.06G091600 Carya illinoinensis HOM05D006135 ORTHO05D007533 5.3e-125 451.4 300 73.7
FAN07G2159 Fragaria x ananassa HOM05D006135 ORTHO05D007533 6.9e-125 451.1 298 75.5
Sed0023480 Sechium edule HOM05D006135 ORTHO05D007533 6.9e-125 451.1 300 73.3
Sc04g0007660 Simmondsia chinensis HOM05D006135 ORTHO05D007533 9.1e-125 450.7 300 72.3
Lalb_Chr10g0096961 Lupinus albus HOM05D006135 ORTHO05D007533 1.2e-124 450.3 302 72.2
Manes.07G067750 Manihot esculenta HOM05D006135 ORTHO05D007533 1.2e-124 450.3 300 72.7
Manes.07G067800 Manihot esculenta HOM05D006135 ORTHO05D007533 1.2e-124 450.3 300 72.7
FAN12G3645 Fragaria x ananassa HOM05D006135 ORTHO05D007533 1.5e-124 449.9 298 75.2
Gohir.D02G129100 Gossypium hirsutum HOM05D006135 ORTHO05D007533 1.5e-124 449.9 300 73.3
Gorai.005G144800 Gossypium raimondii HOM05D006135 ORTHO05D007533 1.5e-124 449.9 300 73.3
FAN17G2903 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.4e-124 448.7 298 74.8
Gohir.A03G103900 Gossypium hirsutum HOM05D006135 ORTHO05D007533 5.9e-124 448.0 300 73.3
FvH4_4g30260 Fragaria vesca HOM05D006135 ORTHO05D007533 7.7e-124 447.6 298 74.8
Sabra10G0121200 Salix brachista HOM05D006135 ORTHO05D007533 7.7e-124 447.6 300 72.0
Hma1.2p1_0357F.1_g134610 Hydrangea macrophylla HOM05D006135 ORTHO05D007533 1.3e-123 446.8 298 73.5
SalBow2G2095 Salvia bowleyana HOM05D006135 ORTHO05D007533 1.3e-123 446.8 302 73.2
Atru.chr11.1655 Acer truncatum HOM05D006135 ORTHO05D007533 2.2e-123 446.0 301 74.1
Peaxi162Scf00155g00910 Petunia axillaris HOM05D006135 ORTHO05D007533 2.2e-123 446.0 300 73.0
CSS0045883 Camellia sinensis var. sinensis HOM05D006135 ORTHO05D007533 2.9e-123 445.7 298 72.5
FAN22G2161 Fragaria x ananassa HOM05D006135 ORTHO05D007533 3.8e-123 445.3 298 74.2
Rhsim08G0202600 Rhododendron simsii HOM05D006135 ORTHO05D007533 3.8e-123 445.3 298 72.8
Oeu004576.4 Olea europaea HOM05D006135 ORTHO05D007533 1.1e-122 443.7 300 72.7
Cc11_g12150 Coffea canephora HOM05D006135 ORTHO05D007533 1.9e-122 443.0 300 74.3
Lj6P780T42 Lonicera japonica HOM05D006135 ORTHO05D007533 3.2e-122 442.2 303 72.3
Potri.008G094600 Populus trichocarpa HOM05D006135 ORTHO05D007533 3.2e-122 442.2 300 72.3
MD16G1062500 Malus domestica HOM05D006135 ORTHO05D007533 7.2e-122 441.0 298 72.8
Prupe.1G285000 Prunus persica HOM05D006135 ORTHO05D007533 1.6e-121 439.9 298 72.1
Sopen08g004100 Solanum pennellii HOM05D006135 ORTHO05D007533 1.6e-121 439.9 300 73.0
ECA246G3492 Erigeron canadensis HOM05D006135 ORTHO05D007533 2.1e-121 439.5 300 71.0
EL10Ac6g14988 Beta vulgaris HOM05D006135 ORTHO05D007533 6.1e-121 438.0 300 72.0
PGSC0003DMG400005786 Solanum tuberosum HOM05D006135 ORTHO05D007533 7.9e-121 437.6 300 73.0
MSTRG.745 Avicennia marina HOM05D006135 ORTHO05D007533 1.0e-120 437.2 302 70.5
CAN.G792.64 Capsicum annuum HOM05D006135 ORTHO05D007533 3.0e-120 435.6 300 72.3
AUR62013291 Chenopodium quinoa HOM05D006135 ORTHO05D007533 5.2e-120 434.9 300 71.7
HanXRQChr12g0375331 Helianthus annuus HOM05D006135 ORTHO05D007533 8.8e-120 434.1 300 70.7
TAR622G1353 Trochodendron aralioides HOM05D006135 ORTHO05D007533 1.5e-119 433.3 300 71.7
AUR62007931 Chenopodium quinoa HOM05D006135 ORTHO05D007533 2.6e-119 432.6 300 71.3
Migut.L01201 Erythranthe guttata HOM05D006135 ORTHO05D007533 3.3e-119 432.2 298 70.1
SalBow6G2218 Salvia bowleyana HOM05D006135 ORTHO05D007533 2.8e-118 429.1 294 70.7
Lsat_1_v5_gn_3_56041 Lactuca sativa HOM05D006135 ORTHO05D007533 2.4e-117 426.0 300 69.7
Medtr8g446960 Medicago truncatula HOM05D006135 ORTHO05D007533 2.6e-116 422.5 303 70.3
PSO170G2502 Papaver somniferum HOM05D006135 ORTHO05D007533 4.5e-116 421.8 300 69.3
TPR.G19440 Trifolium pratense HOM05D006135 ORTHO05D007533 4.5e-116 421.8 302 69.5
CANSAT64G3010 Cannabis sativa HOM05D006135 ORTHO05D007533 7.7e-116 421.0 304 68.1
Medtr8g030830 Medicago truncatula HOM05D006135 ORTHO05D007533 1.0e-115 420.6 303 70.0
Zm00001eb298610 Zea mays HOM05D006135 ORTHO05D007533 1.9e-114 416.4 300 67.0
Psat4g154880 Pisum sativum HOM05D006135 ORTHO05D007533 2.5e-114 416.0 302 70.2
unitig_22.g6497 Utricularia gibba HOM05D006135 ORTHO05D007533 3.2e-114 415.6 302 67.9
CANSAT64G1447 Cannabis sativa HOM05D006135 ORTHO05D007533 1.6e-113 413.3 304 67.4
MBI03_g07691_MAGBIO Magnolia biondii HOM05D006135 ORTHO05D007533 2.1e-113 412.9 310 67.4
Dinv34082 Davidia involucrata HOM05D006135 ORTHO05D008017 2.7e-113 412.5 293 70.6
TAR374G0384 Trochodendron aralioides HOM05D006135 ORTHO05D007533 3.6e-113 412.1 302 69.5
PSO017G0525 Papaver somniferum HOM05D006135 ORTHO05D007533 1.2e-111 407.1 300 68.3
SGA_v2.0_scaffold308G48068 Striga asiatica HOM05D006135 ORTHO05D007533 1.3e-110 403.7 303 66.0
Ah.04g155380 Amaranthus hybridus HOM05D001254 ORTHO05D007533 2.8e-110 402.5 284 68.7
SGA_v2.0_scaffold36G14447 Striga asiatica HOM05D006135 ORTHO05D007533 3.8e-107 392.1 303 65.3
HPP92_017746 Vanilla planifolia HOM05D006135 ORTHO05D007533 1.4e-104 383.6 300 63.3
Sabra08G0071100 Salix brachista HOM05D006135 ORTHO05D007533 3.0e-104 382.5 275 69.1
HanXRQChr13g0417131 Helianthus annuus HOM05D006135 ORTHO05D007533 1.4e-101 373.6 248 71.0
Solyc08g008250.3 Solanum lycopersicum HOM05D006135 ORTHO05D007533 5.4e-101 371.7 248 73.8
SHI21260 Sapria himalayana HOM05D006135 ORTHO05D007533 4.7e-97 358.6 297 59.6
ClCG08G010310 Citrullus lanatus HOM05D006135 ORTHO05D008017 3.0e-96 355.9 221 74.7
SMO115G0347 Selaginella moellendorffii HOM05D006135 ORTHO05D007533 7.5e-95 351.3 303 60.7
Pp3c10_170 Physcomitrium patens HOM05D006135 ORTHO05D007533 2.4e-93 346.3 303 60.1
CDE04G1019 Ceratophyllum demersum HOM05D006135 ORTHO05D007533 2.9e-91 339.3 248 67.7
Nitab4.5_0000100g0120 Nicotiana tabacum HOM05D006135 ORTHO05D007533 7.3e-90 334.7 224 71.9
Nitab4.5_0000607g0040 Nicotiana tabacum HOM05D006135 ORTHO05D007533 1.6e-89 333.6 256 65.6
ATR1136G145 Amborella trichopoda HOM05D006135 ORTHO05D007533 6.1e-89 331.6 254 64.6
Haze_11974 Corylus avellana HOM05D006135 ORTHO05D007533 2.3e-88 329.7 227 70.9
Aqoxy6G00083 Aquilegia oxysepala HOM05D006135 ORTHO05D007533 5.2e-88 328.6 219 74.4
Duzib251G0397 Durio zibethinus HOM05D006135 ORTHO05D007533 2.0e-87 326.6 235 66.8
SalBow2G1772 Salvia bowleyana HOM05D006135 ORTHO05D007533 3.4e-87 325.9 220 71.4
SalBow6G7020 Salvia bowleyana HOM05D006135 ORTHO05D007533 4.4e-87 325.5 224 69.6
Mapoly0008s0061 Marchantia polymorpha HOM05D006135 ORTHO05D007533 2.1e-81 306.6 277 56.7
CBR_g32247 Chara braunii HOM05D006135 ORTHO05D007533 1.0e-75 287.7 338 48.5
Nn3g17430 Nelumbo nucifera HOM05D006135 ORTHO05D007533 4.9e-70 268.9 300 52.3
vmacro19077 Vaccinium macrocarpon HOM05D006135 ORTHO05D007533 3.0e-67 259.6 173 68.8
Cre17.g711050 Chlamydomonas reinhardtii HOM05D006135 ORTHO05D007533 7.3e-58 228.4 318 42.8
PRCOL_00001916 Prasinoderma coloniale HOM05D006135 ORTHO05D007533 1.7e-46 190.7 343 36.7
Oeu025274.1 Olea europaea HOM05D006135 ORTHO05D007533 3.7e-41 172.9 157 59.9
Pp3c8_25320 Physcomitrium patens HOM05D006135 ORTHO05D007533 1.4e-40 171.0 166 54.8
MCO02G221 Micromonas commoda HOM05D006135 ORTHO05D007533 1.3e-38 164.5 177 49.7
SEGI_02005 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 2.5e-34 150.2 105 70.5
Dinv16720 Davidia involucrata HOM05D006135 ORTHO05D007533 4.0e-32 142.9 87 73.6
GSVIVG01012190001 Vitis vinifera HOM05D001577 ORTHO05D008017 9.0e-32 141.7 300 35.0
Cfa026301 Carpinus fangiana HOM05D006135 ORTHO05D007533 4.1e-24 116.3 353 31.4
DCAR_030035 Daucus carota HOM05D006135 ORTHO05D007533 5.3e-24 115.9 88 63.6
Lsat_1_v5_gn_2_78301 Lactuca sativa HOM05D006135 ORTHO05D007533 4.5e-23 112.8 91 64.8
AagrBONN_evm.TU.Sc2ySwM_362.1915 Anthoceros agrestis HOM05D006135 ORTHO05D007533 3.8e-22 109.8 72 68.1
Os11g0312340 Oryza sativa ssp. japonica HOM05D006135 ORTHO05D007533 3.8e-22 109.8 86 67.4
HPP92_017676 Vanilla planifolia HOM05D006135 ORTHO05D007533 2.7e-20 103.6 135 45.9
SEGI_31918 Sequoiadendron giganteum HOM05D006135 ORTHO05D007533 3.3e-18 96.7 67 59.7
Lalb_Chr17g0339631 Lupinus albus HOM05D006135 ORTHO05D007533 1.7e-17 94.4 64 76.6
Glyma.03G009300 Glycine max HOM05D006135 ORTHO05D007533 1.3e-09 68.2 43 69.8


User provided reference genes

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