Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ca_31306_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.2e-129 466.8 286 100.0
Ca_20760_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 7.5e-129 464.2 286 99.7
TPR.G19495 Trifolium pratense HOM05D002828 ORTHO05D003457 9.5e-108 394.0 288 84.7
Glyma.20G233800 Glycine max HOM05D003921 ORTHO05D004394 9.5e-100 367.5 289 80.6
TPR.G27266 Trifolium pratense HOM05D003921 ORTHO05D004394 3.6e-99 365.5 286 81.1
Phvul.007G180200 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 3.1e-98 362.5 289 83.0
Phvul.007G264700 Phaseolus vulgaris HOM05D003921 ORTHO05D004394 3.7e-96 355.5 289 82.0
Medtr5g028350 Medicago truncatula HOM05D003921 ORTHO05D004394 5.1e-93 345.1 290 80.0
VMungo0720G1998 Vigna mungo HOM05D003921 ORTHO05D004394 3.3e-92 342.4 289 78.9
Medtr8g075400 Medicago truncatula HOM05D003921 ORTHO05D004394 4.0e-90 335.5 286 80.1
Lalb_Chr10g0096111 Lupinus albus HOM05D003921 ORTHO05D004394 6.8e-90 334.7 292 66.8
arahy.Tifrunner.gnm1.ann1.HSUB65 Arachis hypogaea HOM05D003921 ORTHO05D004394 9.9e-89 330.9 275 73.5
Lj3g0006890 Lotus japonicus HOM05D003921 ORTHO05D004394 2.9e-88 329.3 286 71.0
Glyma.10G154500 Glycine max HOM05D003921 ORTHO05D004394 3.8e-88 328.9 289 69.9
Ca_25165_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 1.1e-87 327.4 288 79.5
Haze_17961 Corylus avellana HOM05D003921 ORTHO05D004394 4.6e-86 322.0 290 64.5
Psat2g139240 Pisum sativum HOM05D003921 ORTHO05D004394 1.7e-85 320.1 289 77.2
Lalb_Chr06g0167921 Lupinus albus HOM05D003921 ORTHO05D004394 2.3e-85 319.7 286 65.0
Cfa018157 Carpinus fangiana HOM05D003921 ORTHO05D004394 3.0e-85 319.3 290 64.1
TAR626G1747 Trochodendron aralioides HOM05D003921 ORTHO05D004394 1.3e-83 313.9 271 78.6
CiPaw.15G078700 Carya illinoinensis HOM05D003921 ORTHO05D004394 6.9e-82 308.1 284 77.1
Cpa.g.sc3.273 Carica papaya HOM05D003921 ORTHO05D004394 9.0e-82 307.8 292 61.0
Prupe.2G282000 Prunus persica HOM05D003921 ORTHO05D004394 2.6e-81 306.2 285 74.7
COL.COLO4_14179 Corchorus olitorius HOM05D003921 ORTHO05D004394 9.9e-81 304.3 289 68.9
Potri.015G131200 Populus trichocarpa HOM05D003921 ORTHO05D004394 2.2e-80 303.1 294 60.5
Hma1.2p1_0654F.1_g196410 Hydrangea macrophylla HOM05D003921 ORTHO05D004394 1.4e-79 300.4 294 58.5
MD01G1185600 Malus domestica HOM05D003921 ORTHO05D004394 4.2e-79 298.9 282 74.8
MBI05_g15474_MAGBIO Magnolia biondii HOM05D003921 ORTHO05D004394 4.6e-78 295.4 281 60.9
MD07G1257700 Malus domestica HOM05D003921 ORTHO05D004394 1.7e-77 293.5 282 74.8
CSS0011813 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 8.7e-77 291.2 293 70.6
Gohir.A07G039500 Gossypium hirsutum HOM05D003921 ORTHO05D004394 8.7e-77 291.2 285 61.8
CSS0049059 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 1.5e-76 290.4 276 61.2
PGR042G0045 Punica granatum HOM05D003921 ORTHO05D004394 7.4e-76 288.1 289 67.1
FvH4_7g28160 Fragaria vesca HOM05D003921 ORTHO05D004394 1.6e-75 287.0 259 71.0
Gohir.D07G043600 Gossypium hirsutum HOM05D003921 ORTHO05D004394 2.1e-75 286.6 294 59.9
Gorai.001G046600 Gossypium raimondii HOM05D003921 ORTHO05D004394 4.8e-75 285.4 294 59.9
FAN06G4038 Fragaria x ananassa HOM05D003921 ORTHO05D004394 8.1e-75 284.6 259 69.9
Lalb_Chr17g0338581 Lupinus albus HOM05D003921 ORTHO05D004394 8.1e-75 284.6 289 59.5
QL02p008779 Quercus lobata HOM05D003921 ORTHO05D004394 8.1e-75 284.6 280 64.6
Thecc.03G161300 Theobroma cacao HOM05D003921 ORTHO05D004394 8.1e-75 284.6 278 61.2
vmacro18851 Vaccinium macrocarpon HOM05D003921 ORTHO05D004394 1.1e-74 284.3 291 58.8
RcHm_v2.0_Chr1g0375101 Rosa chinensis HOM05D003921 ORTHO05D004394 1.4e-74 283.9 259 66.8
Dinv22928 Davidia involucrata HOM05D003921 ORTHO05D004394 2.4e-74 283.1 289 58.8
Rhsim11G0028600 Rhododendron simsii HOM05D003921 ORTHO05D004394 2.4e-74 283.1 297 56.6
Atru.chr1.637 Acer truncatum HOM05D003921 ORTHO05D004394 3.1e-74 282.7 285 66.0
ClCG01G005120 Citrullus lanatus HOM05D003921 ORTHO05D004394 3.1e-74 282.7 260 70.8
Aa31LG5G22190 Aethionema arabicum HOM05D003921 ORTHO05D004394 5.3e-74 282.0 288 58.7
Cc02_g03920 Coffea canephora HOM05D003921 ORTHO05D004394 2.0e-73 280.0 289 65.7
PSO478G1412 Papaver somniferum HOM05D003921 ORTHO05D004394 2.0e-73 280.0 277 68.2
PSO782G4293 Papaver somniferum HOM05D003921 ORTHO05D004394 2.0e-73 280.0 288 66.3
Sed0011284 Sechium edule HOM05D003921 ORTHO05D004394 2.0e-73 280.0 295 65.8
FAN03G1144 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.4e-73 279.3 249 71.1
Migut.J00413 Erythranthe guttata HOM05D003921 ORTHO05D004394 4.5e-73 278.9 287 57.5
Sed0026547 Sechium edule HOM05D003921 ORTHO05D004394 5.8e-73 278.5 298 66.1
Aqoxy1G01610 Aquilegia oxysepala HOM05D003921 ORTHO05D004394 7.6e-73 278.1 291 62.5
BraA03t13433Z Brassica rapa HOM05D003921 ORTHO05D004394 1.3e-72 277.3 291 61.9
Manes.06G137800 Manihot esculenta HOM05D003921 ORTHO05D004394 1.7e-72 276.9 295 58.3
BraA01t03380Z Brassica rapa HOM05D003921 ORTHO05D004394 2.2e-72 276.6 288 60.4
SGA_v2.0_scaffold126G33894 Striga asiatica HOM05D003921 ORTHO05D004394 2.9e-72 276.2 258 68.6
TAR636G2246 Trochodendron aralioides HOM05D003921 ORTHO05D004394 2.9e-72 276.2 295 56.9
A01p32500 Brassica napus HOM05D003921 ORTHO05D004394 3.8e-72 275.8 288 60.1
TWI14G0513 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 6.4e-72 275.0 295 63.1
FAN06G2146 Fragaria x ananassa HOM05D003921 ORTHO05D004394 8.4e-72 274.6 255 69.4
BcaB06g26378 Brassica carinata HOM05D003921 ORTHO05D004394 1.1e-71 274.2 288 60.8
FAN10G0634 Fragaria x ananassa HOM05D003921 ORTHO05D004394 1.4e-71 273.9 255 69.4
Aa31LG5G22200 Aethionema arabicum HOM05D003921 ORTHO05D004394 3.2e-71 272.7 288 56.9
BcaC05g28029 Brassica carinata HOM05D003921 ORTHO05D004394 3.2e-71 272.7 288 69.8
A03p42870 Brassica napus HOM05D003921 ORTHO05D004394 3.2e-71 272.7 291 60.8
BraA05t21488Z Brassica rapa HOM05D003921 ORTHO05D004394 3.2e-71 272.7 290 60.7
FAN01G0440 Fragaria x ananassa HOM05D003921 ORTHO05D004394 3.2e-71 272.7 255 69.0
CDE07G0272 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 5.5e-71 271.9 285 57.9
FAN03G3435 Fragaria x ananassa HOM05D003921 ORTHO05D004394 5.5e-71 271.9 255 69.0
A05p26040 Brassica napus HOM05D003921 ORTHO05D004394 9.3e-71 271.2 281 61.6
BolC5t32786H Brassica oleracea HOM05D003921 ORTHO05D004394 1.2e-70 270.8 288 69.4
unitig_744.g24672 Utricularia gibba HOM05D003921 ORTHO05D004394 1.2e-70 270.8 275 65.5
BcaC09g49188 Brassica carinata HOM05D003921 ORTHO05D004394 3.5e-70 269.2 290 60.7
C01p41660 Brassica napus HOM05D003921 ORTHO05D004394 3.5e-70 269.2 290 60.7
BolC1t04121H Brassica oleracea HOM05D003921 ORTHO05D004394 3.5e-70 269.2 290 60.7
TWI23G0331 Tripterygium wilfordii HOM05D003921 ORTHO05D004394 6.0e-70 268.5 296 61.1
CSS0023430 Camellia sinensis var. sinensis HOM05D003921 ORTHO05D004394 3.9e-69 265.8 276 58.3
Duzib084G0641 Durio zibethinus HOM05D003921 ORTHO05D004394 3.9e-69 265.8 291 58.1
Rhsim07G0193400 Rhododendron simsii HOM05D003921 ORTHO05D004394 6.7e-69 265.0 278 56.1
MELO3C005417.2 Cucumis melo HOM05D003921 ORTHO05D004394 8.7e-69 264.6 300 60.0
BcaB04g20506 Brassica carinata HOM05D003921 ORTHO05D004394 1.1e-68 264.2 290 59.0
HanXRQChr05g0141401 Helianthus annuus HOM05D003921 ORTHO05D004394 1.1e-68 264.2 262 64.1
BcaC01g03432 Brassica carinata HOM05D003921 ORTHO05D004394 3.3e-68 262.7 295 58.3
CsaV3_5G005400 Cucumis sativus L. HOM05D003921 ORTHO05D004394 4.3e-68 262.3 268 63.1
DCAR_020219 Daucus carota HOM05D003921 ORTHO05D004394 5.6e-68 261.9 264 64.8
Thhalv10021245m.g Eutrema salsugineum HOM05D003921 ORTHO05D004394 5.6e-68 261.9 290 58.6
BolC3t17533H Brassica oleracea HOM05D003921 ORTHO05D004394 7.4e-68 261.5 297 59.3
Solyc01g006090.3 Solanum lycopersicum HOM05D003921 ORTHO05D004394 9.6e-68 261.2 288 55.2
BcaB04g19210 Brassica carinata HOM05D003921 ORTHO05D004394 1.6e-67 260.4 254 63.4
C03p52650 Brassica napus HOM05D003921 ORTHO05D004394 1.6e-67 260.4 297 57.6
HanXRQChr08g0224051 Helianthus annuus HOM05D003921 ORTHO05D004394 1.6e-67 260.4 262 62.2
CARHR098540 Cardamine hirsuta HOM05D003921 ORTHO05D004394 2.8e-67 259.6 289 66.8
Eucgr.E01709 Eucalyptus grandis HOM05D003921 ORTHO05D004394 3.7e-67 259.2 264 57.2
AT3G22660 Arabidopsis thaliana HOM05D003921 ORTHO05D004394 6.2e-67 258.5 254 58.3
Solyc01g006170.4 Solanum lycopersicum HOM05D003921 ORTHO05D004394 1.1e-66 257.7 293 53.2
Ciclev10005521m.g Citrus clementina HOM05D003921 ORTHO05D004394 1.8e-66 256.9 260 59.2
Carub.0003s2281 Capsella rubella HOM05D003921 ORTHO05D004394 4.0e-66 255.8 287 54.0
Sopen01g002180 Solanum pennellii HOM05D003921 ORTHO05D004394 4.0e-66 255.8 293 52.9
AL3G36960 Arabidopsis lyrata HOM05D003921 ORTHO05D004394 5.3e-66 255.4 287 54.4
Ca_27419_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 6.9e-66 255.0 178 98.3
Lsat_1_v5_gn_6_96180 Lactuca sativa HOM05D003921 ORTHO05D004394 6.9e-66 255.0 264 56.4
PGSC0003DMG400032192 Solanum tuberosum HOM05D003921 ORTHO05D004394 1.2e-65 254.2 275 54.5
Nitab4.5_0001620g0040 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.5e-65 253.8 266 63.2
Sc03g0002240 Simmondsia chinensis HOM05D003921 ORTHO05D004394 1.5e-65 253.8 287 55.1
PGSC0003DMG400032141 Solanum tuberosum HOM05D003921 ORTHO05D004394 4.5e-65 252.3 296 52.7
Nitab4.5_0005477g0070 Nicotiana tabacum HOM05D003921 ORTHO05D004394 5.8e-65 251.9 298 58.7
THA.LOC104808294 Tarenaya hassleriana HOM05D003921 ORTHO05D004394 1.9e-63 246.9 286 54.2
ATR0626G386 Amborella trichopoda HOM05D003921 ORTHO05D004394 2.5e-63 246.5 279 56.3
Lj1P984T37 Lonicera japonica HOM05D003921 ORTHO05D004394 2.5e-63 246.5 264 56.1
Ah.06g188120 Amaranthus hybridus HOM05D003921 ORTHO05D004394 2.7e-62 243.0 268 63.1
Sp3g20420 Schrenkiella parvula HOM05D003921 ORTHO05D004394 7.9e-62 241.5 288 52.1
Zm00001eb235000 Zea mays HOM05D003921 ORTHO05D004394 1.3e-61 240.7 281 59.8
Ah.06g188100 Amaranthus hybridus HOM05D003921 ORTHO05D004394 5.1e-61 238.8 294 58.8
ECA234G0656 Erigeron canadensis HOM05D003921 ORTHO05D004394 5.1e-61 238.8 285 54.7
CANSAT11G2317 Cannabis sativa HOM05D003921 ORTHO05D004394 1.5e-60 237.3 247 55.9
EL10Ac4g09457 Beta vulgaris HOM05D003921 ORTHO05D004394 1.6e-59 233.8 291 50.9
AUR62000393 Chenopodium quinoa HOM05D003921 ORTHO05D004394 2.8e-59 233.0 295 51.2
Zm00001eb104900 Zea mays HOM05D003921 ORTHO05D004394 3.1e-58 229.6 248 62.5
Dinv22984 Davidia involucrata HOM05D003921 ORTHO05D004394 9.0e-58 228.0 287 51.9
Ah.06g188150 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.2e-57 227.6 272 58.8
Ciclev10006627m.g Citrus clementina HOM05D003921 ORTHO05D004394 2.9e-56 223.0 273 61.2
Rhsim11G0028700 Rhododendron simsii HOM05D003921 ORTHO05D004394 5.5e-55 218.8 287 49.8
Peaxi162Scf00441g00013 Petunia axillaris HOM05D003921 ORTHO05D004394 7.2e-55 218.4 262 54.2
FAN10G0556 Fragaria x ananassa HOM05D003921 ORTHO05D004394 9.3e-55 218.0 193 71.0
CAN.G140.50 Capsicum annuum HOM05D003921 ORTHO05D004394 3.6e-54 216.1 285 56.8
ECA233G5254 Erigeron canadensis HOM05D003921 ORTHO05D004394 1.0e-53 214.5 240 58.3
Os07g0475800 Oryza sativa ssp. japonica HOM05D003921 ORTHO05D004394 6.7e-53 211.8 289 55.0
AUR62006749 Chenopodium quinoa HOM05D003921 ORTHO05D004394 2.2e-51 206.8 292 54.8
Oeu019922.1 Olea europaea HOM05D003921 ORTHO05D004394 4.5e-49 199.1 247 60.7
Nitab4.5_0000249g0460 Nicotiana tabacum HOM05D003921 ORTHO05D004394 1.7e-48 197.2 266 50.8
CDE04G0151 Ceratophyllum demersum HOM05D003921 ORTHO05D004394 2.3e-45 186.8 204 60.8
SHI13875 Sapria himalayana HOM05D003921 ORTHO05D004394 4.4e-44 182.6 248 49.6
Sopen01g002090 Solanum pennellii HOM05D003921 ORTHO05D004394 4.4e-44 182.6 203 54.7
SMO174G0035 Selaginella moellendorffii HOM05D003921 ORTHO05D004394 5.9e-41 172.2 232 46.1
MSTRG.14093 Avicennia marina HOM05D003921 ORTHO05D004394 1.3e-40 171.0 148 77.7
Nn1g08099 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.3e-40 171.0 124 70.2
Pp3c6_25210 Physcomitrium patens HOM05D003921 ORTHO05D004394 1.7e-40 170.6 274 39.8
Ah.06g188070 Amaranthus hybridus HOM05D003921 ORTHO05D004394 9.4e-39 164.9 159 67.9
BcaC09g49189 Brassica carinata HOM05D003921 ORTHO05D004394 9.4e-39 164.9 187 68.4
Nitab4.5_0004389g0020 Nicotiana tabacum HOM05D003921 ORTHO05D004394 3.6e-38 162.9 290 41.4
Oeu019920.1 Olea europaea HOM05D003921 ORTHO05D004394 1.0e-37 161.4 313 51.1
DCAR_018123 Daucus carota HOM05D003921 ORTHO05D004394 3.0e-37 159.8 274 50.4
HPP92_008700 Vanilla planifolia HOM05D003921 ORTHO05D004394 3.3e-36 156.4 132 56.8
Eucgr.K01460 Eucalyptus grandis HOM05D003921 ORTHO05D004394 4.8e-35 152.5 136 61.0
Nn1g01220 Nelumbo nucifera HOM05D003921 ORTHO05D004394 6.3e-35 152.1 127 63.8
Oeu021724.1 Olea europaea HOM05D003921 ORTHO05D004394 5.9e-33 145.6 266 42.1
Ca_29708_v3 Cicer arietinum L. HOM05D003921 ORTHO05D004394 8.5e-32 141.7 78 94.9
Oeu023230.1 Olea europaea HOM05D003921 ORTHO05D004394 8.5e-32 141.7 273 39.9
Mapoly0140s0011 Marchantia polymorpha HOM05D003921 ORTHO05D004394 3.6e-30 136.3 263 36.9
GSVIVG01018514001 Vitis vinifera HOM05D003921 ORTHO05D004394 2.3e-29 133.7 287 38.7
RcHm_v2.0_Chr5g0027461 Rosa chinensis HOM05D003921 ORTHO05D017011 1.5e-28 131.0 118 56.8
MSTRG.5717 Avicennia marina HOM05D003921 ORTHO05D004394 3.3e-28 129.8 189 60.3
Hund09280 Selenicereus undatus HOM05D003921 ORTHO05D004394 2.2e-27 127.1 116 62.9
Hund09282 Selenicereus undatus HOM05D003921 ORTHO05D004394 2.2e-27 127.1 116 62.9
AagrBONN_evm.TU.Sc2ySwM_228.1082 Anthoceros agrestis HOM05D003921 ORTHO05D004394 1.4e-26 124.4 292 33.6
MSTRG.14095 Avicennia marina HOM05D003921 ORTHO05D004394 1.2e-25 121.3 117 61.5
PRCOL_00003036 Prasinoderma coloniale HOM05D003921 ORTHO05D004394 2.9e-24 116.7 247 32.8
Nn4g26407 Nelumbo nucifera HOM05D003921 ORTHO05D004394 1.1e-23 114.8 101 61.4
Actinidia39598 Actinidia chinensis HOM05D003921 ORTHO05D004394 1.6e-22 110.9 102 61.8
ATR0564G120 Amborella trichopoda HOM05D003921 ORTHO05D004394 6.1e-22 109.0 195 40.0
CBR_g18581 Chara braunii HOM05D001161 ORTHO05D000497 5.2e-21 105.9 253 34.4
Cre07.g351750 Chlamydomonas reinhardtii HOM05D003921 ORTHO05D004394 1.5e-20 104.4 239 35.6
Actinidia25037 Actinidia chinensis HOM05D003921 ORTHO05D004394 2.6e-20 103.6 87 62.1
Actinidia31394 Actinidia chinensis HOM05D003921 ORTHO05D004394 4.1e-18 96.3 169 43.8
Prupe.2G115300 Prunus persica HOM05D003921 ORTHO05D004394 5.4e-18 95.9 217 38.2
MCO16G303 Micromonas commoda HOM05D003921 ORTHO05D004394 9.1e-18 95.1 203 34.0
Nn4g26401 Nelumbo nucifera HOM05D003921 ORTHO05D004394 6.5e-16 89.0 68 66.2
Actinidia13554 Actinidia chinensis HOM05D003921 ORTHO05D004394 4.2e-15 86.3 57 73.7
Ah.06g188140 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.6e-14 84.3 116 51.7
Ah.06g188080 Amaranthus hybridus HOM05D003921 ORTHO05D004394 1.8e-13 80.9 91 58.2
Gohir.D12G264333 Gossypium hirsutum HOM05D003921 ORTHO05D004394 5.7e-12 75.9 271 28.8
Gorai.008G283700 Gossypium raimondii HOM05D003921 ORTHO05D004394 5.7e-12 75.9 263 30.4
Oeu039213.1 Olea europaea HOM05D003921 ORTHO05D004394 4.1e-10 69.7 75 56.0
FvH4_1g22470 Fragaria vesca HOM05D003475 ORTHO05D035452 1.6e-09 67.8 54 64.8
Dinv10307 Davidia involucrata HOM05D003921 ORTHO05D004394 4.3e-07 59.7 36 77.8


User provided reference genes

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